Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20oxysporum_20f._20melongenae_20[genbank_20GCA_5F002234085. 1_202017-07-27] 1,726 sequences; 52,309,290 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq80 127 2e-24 >seq80 Length=2348490 Score = 127 bits (140), Expect = 2e-24 Identities = 339/513 (66%), Gaps = 9/513 (2%) Strand=Plus/Minus Query 138183 ACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGTGGAATACAGAATGTCTTATGT 138242 ||| | ||||| || || || ||||| || || || || ||||||||||| ||||| || Sbjct 1705590 ACAGCGATAGGGCCAACACCGGGACCACCGCCGCCGTGGGGAATACAGAAGGTCTTGTGG 1705531 Query 138243 AAATTTAGATGACATACATCTGCACCATAGTCACATGGTTTTGCTAGACCTACCTGTGCA 138302 | || ||||| || ||||| |||||| ||||| || | ||||| | ||| || Sbjct 1705530 AGGTTGAGATGGCAGACATCAGCACCAATGTCACCGGGGCTGCAAAGACCGATCTGGGCG 1705471 Query 138303 TTTAGATTTGCACCATCGAGATATACCTGACCACCATTGTCATGAACGATCTTACATATC 138362 || | || ||||| || | || || |||| |||| || || || | | ||| | Sbjct 1705470 TTCATGTTGGCACCGTCCATGTAGACGAGACCGCCATGCTCGTGGACAAGATCACAGACT 1705411 Query 138363 TGTCTGATGTTTGTTTCAAATACACCATGAGTCGATGGATATGTAATCATAATACATGAG 138422 || |||| | | || || ||||| ||| || ||||| |||| ||| ||| | Sbjct 1705410 TGCTTGATCTCAGGCTCGAAGACACCGAAAGTAGAGGGATAGGTAACCATGATAGCAGCA 1705351 Query 138423 AGTTCAAATGTATTCATGATTGCTTTCTTCTCTAGATCTTTGATGTCTATGTTGCCA--- 138479 || ||| | | | ||| || || ||||| | ||| || | ||| ||| Sbjct 1705350 AGCTCATCAGCGTGCTTGACACACTTGGCCTTCAGATCCTCGATATCCAGGTTACCAGTC 1705291 Query 138480 TCATCATCACACTTGACACCTACAACTTTCATTCCTGCCATGACTGCACTAGCAGGATTA 138539 | | | |||||||||||| ||||| ||||| || |||||| | ||| |||||| || Sbjct 1705290 TTACCGTCACACTTGACAGTAACAACCTTCATACCAGCCATGGCAGCAGAAGCAGGGTTG 1705231 Query 138540 GTTCCATGTGCTGACTCTGGTATCAGACATACATTTCTTTTATCATC-TCCTGATCCTTG 138598 || || || || || | || || || || || |||| ||||| | || || ||| | Sbjct 1705230 GTACCGTGAGCCGAAACAGGGATAAGGCAGACCTTTCGCTTATCTCCATCACGAGCCTCG 1705171 Query 138599 ATGATATGCTTGGAT--TGCTAACAGTCCTGCATACTCACCCTGTGATCCTGCGTTAGGT 138656 || || || | ||| || | || || ||| |||||||||||| || | ||| || Sbjct 1705170 -TGGTAAGCCTTGATACAGCGA--AGACCAGCAAACTCACCCTGTGCACCAGAGTTGGGC 1705114 Query 138657 TGTAATGATATAGAATCAAAACCTGTGATATCA 138689 || | | ||| || | ||| ||||| ||| Sbjct 1705113 TGAAGAGTGGTAGCGTCCATACCAGTGATCTCA 1705081 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578985908109520