Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20oxysporum_20f._20melongenae_20[genbank_20GCA_5F002234085.
1_202017-07-27] 1,726 sequences; 52,309,290 total letters
Query= NC_027778.1
Length=124244
Score E
Sequences producing significant alignments: (Bits) Value
seq899 93.3 3e-14
>seq899
Length=535284
Score = 93.3 bits (102), Expect = 3e-14
Identities = 272/413 (66%), Gaps = 27/413 (7%)
Strand=Plus/Plus
Query 19348 GGACTTTTGCTTTATGGGCCACCGGGTTGTGGAAAAACATTAATTGCGAGAGAACTTAGT 19407
||||| | ||||||||||| || || ||| |||||| | ||||| || || | |
Sbjct 225823 GGACTACTACTTTATGGGCCCCCAGGAACTGGTAAAACACTGATTGCCCGACAATTAGGC 225882
Query 19408 AAATTACTTACAAAAC----AACCTCCCAAAATTGTAAATGGTCCTGAAATCTTAAATAA 19463
||| ||| | |||| | || || || ||||| ||||| || ||| | | |||||
Sbjct 225883 AAA--ACT--CTAAACGCCCATCCACCTAAGATTGTCAATGGCCCCGAAGTGCTGAATAA 225938
Query 19464 ATATGTAGGTCAATCGGAAGAAAATGTACGACGTTTGTTTGCTGACGCTGAAGAAGA--A 19521
| ||| |||||||| || || || | || |||| || || || || |||| |
Sbjct 225939 GTTTGTTGGTCAATCCGAGGAGAACATCAGAAAGCTGTTCGCAGATGCAGAGAAAGAGTA 225998
Query 19522 CAA--AAACGTTTAGGGCG-CAAAAGTTCTTTGCACATTATAATACTAGATGAATTGGAC 19578
||| ||| |||| | | | ||| | | ||||| || || | ||||| | ||
Sbjct 225999 CAAGGAAA-----AGGGAGACGAGAGTGGTCTTCACATCATCATCTTTGATGAGCTTGAT 226053
Query 19579 GCAATCTGTAAGCAAAGAGGTTCTGGTGTAAATGGAGT-ACA--------TGACACTGTT 19629
|| | |||||||| |||||||||| ||| | ||| ||| ||||||
Sbjct 226054 GCTGTTTGTAAGCAGCGAGGTTCTGGATCTGGTGGCGGCACAGGTGTTGGTGATACTGTT 226113
Query 19630 GTCAATCAACTCCTGTCAAAATTAGACGGTGTTAACCAACTGAATAATATTTTAGTTATT 19689
||||| || ||||| | ||| | || ||||| || |||| || ||||| | | ||
Sbjct 226114 GTCAACCAGCTCCTTGCCAAACTCGATGGTGTGGACAAACTTAACAATATCCTTTTGATC 226173
Query 19690 GGCATGACTAATAGACTGGAATTAATAGACAGCGCCTTATTACGACCCGGTCG 19742
|||||||| ||| || ||| | || ||| || || |||||||||| ||
Sbjct 226174 GGCATGACCAATCGAAAGGATATGATCGACGAGGCTTTGCTACGACCCGGACG 226226
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397447639264630
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |