Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20phaseoli_20[genbank_20GCA_5F001680515.1_202016-07-06] 16,072 sequences; 50,534,409 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq1450 140 7e-28 seq223 96.9 7e-15 seq443 95.1 3e-14 >seq1450 Length=10739 Score = 140 bits (154), Expect = 7e-28 Identities = 415/632 (66%), Gaps = 21/632 (3%) Strand=Plus/Minus Query 248818 TACGATTTCTTTGCTTTCAAAACGCTGGAGAAATCGTATCTCCTCAAAATTGATGGCAAG 248877 ||| | | ||||| ||||| || || ||| ||| || |||||||| |||||||||||| Sbjct 1847 TACCAGTACTTTGGCTTCAAGACTCTTGAGCGATCCTACCTCCTCAAGATTGATGGCAAG 1788 Query 248878 ATCGTGGAACGAATTCAGCACATGTTGATGCGAGTGGCTGTCGGGATTCACAAGGATGAC 248937 || || || || ||||||||| | ||||| ||| ||||||| || | || |||| Sbjct 1787 ATTGTTGAGCGTCCCCAGCACATGATCATGCGTGTGTCTGTCGGCAT---CTGGGGTGAC 1731 Query 248938 -ATAGAGAGCGTG--CTCGAGACGTAC-ACCGGA--ATGAGTGAACGCTGGATGACACAT 248991 ||| ||||||| || ||||| ||| ||| || ||| || || | || ||| Sbjct 1730 GATATTGAGCGTGTCCTGGAGACCTACAACCTGATGTCGAGCAAATTCT---TCACCCAT 1674 Query 248992 GCCACACCGACGCTCTTCAACGCCGGTACCGTCAACAATCAGCTGAGCTCGTGCTTTCTT 249051 ||| | || || |||||||| || ||||| | | ||||||| ||| ||||| || Sbjct 1673 GCCTCCCCCACCCTCTTCAATGCTGGTACTCCCCAGCCTCAGCTGTCCTCATGCTTCCTG 1614 Query 249052 CTTGCCATGCAAGACGACTCTGTCGACGGCATTTATGACACGCTTAAACAGAC---GGCG 249108 | | |||| |||| ||| | || || |||||||| || || | |||| || Sbjct 1613 GTCGACATGAAAGAGGACAGCATTGAGGGTATTTATGATACTCTCA---AGACCTGTGCC 1557 Query 249109 AAGATTTCTAAATTCGCGGGCGGAATCGGTCTCTCCGTCTCCAACATCCGAGCGAAGGGT 249168 | ||| || || | ||||| || ||||| || |||| | ||||| || | || Sbjct 1556 ATGATCTCCAAGATGGCGGGTGGTATCGGCCTGAACGTCCACCGAATCCGTGCCACTGGC 1497 Query 249169 TCGTACATCAAAGGTACAAATGGGGTCAGTGATGGTATCGTACCCCTCCTTCGATGCTTT 249228 || |||||| ||||| || || | | ||| || ||| | ||||| ||| Sbjct 1496 TCTTACATCGCTGGTACCAACGGTACCTCCAACGGTGTCACCCCCATGCTTCGTGTCTTC 1437 Query 249229 GAGTCCACCGCCAGGTTCATCAACCAGGCCGGGCGC---CGAAAGGGGTCGTTCGCCATG 249285 | ||| ||| ||| | || |||||| || | ||| || | || ||||| Sbjct 1436 AACAACACTGCCCGGTACGTCGACCAGGGTGGCAACAAGCGACCTGGTGCCTTTGCCATC 1377 Query 249286 TATTTGGAAGTGTGGCACGCCGATATATTGGAGTTCCTGGACTTGAAAAAGAACAACGGC 249345 || | || |||||||| ||| | || |||||||| ||| || |||||| ||||| Sbjct 1376 TACCTTGAGCCCTGGCACGCAGATGTCTTTGAGTTCCTTGACCTGCGCAAGAACCACGGC 1317 Query 249346 AACGAGCTCATGAGAGCGCGTGACCTCTTCTACGGCCTGTGGGTCTCCGACTTGTTCATG 249405 || ||| | | || || ||||| ||| | || ||| | |||| | |||||| Sbjct 1316 AAGGAGGAGGTCCGCGCCCGCGACCTGTTCCTGGCTCTCTGGATTCCCGATCTCTTCATG 1257 Query 249406 CGCCGCGTCAAGGCCGACGGCGATTGGACGCT 249437 || ||| || |||| || ||||| || Sbjct 1256 AAGCGTGTCGAGAAGAACGGTGACTGGACCCT 1225 >seq223 Length=31621 Score = 96.9 bits (106), Expect = 7e-15 Identities = 122/168 (73%), Gaps = 0/168 (0%) Strand=Plus/Minus Query 254000 CCTTCCTCATTTGCTTTTCCACGGTCCTCCCGGAACAGGCAAGACGTCAACCATCCTGGC 254059 ||| || ||| | || || |||| ||||| || || ||||||||||| |||||||| || Sbjct 6726 CCTCCCCCATCTCCTCCTCTACGGCCCTCCAGGCACCGGCAAGACGTCGACCATCCTCGC 6667 Query 254060 GCTGGCCCGAACCCTGTTGGGCGAGGGGAACATGAGAGAGCGCGTGCTCGAGCTGAACGC 254119 || ||||| | | | ||| | |||||| | || ||||||||||| ||||| Sbjct 6666 CCTCGCCCGCCGCATCTATGGCACCGCAAACATGCGCCAGATGGTGCTCGAGCTCAACGC 6607 Query 254120 TTCTGACGAACGCGGGTTGGACGTCGTCCGCGACAAGATCAAGACTTT 254167 || ||||| ||||| | ||||| || || || |||||||||| || Sbjct 6606 CTCGGACGACCGCGGCATCGACGTGGTGCGGGAGCAGATCAAGACGTT 6559 >seq443 Length=20866 Score = 95.1 bits (104), Expect = 3e-14 Identities = 133/187 (71%), Gaps = 0/187 (0%) Strand=Plus/Minus Query 254202 TGTCCGCCTTTCAAGCTCGTGATCCTGGACGAGGCGGACACCATGACGGCCGACGCGCAG 254261 || || ||||||||| || | || || |||||||| ||| ||||||| || || ||| Sbjct 15839 TGCCCCCCTTTCAAGATCATCATTCTCGACGAGGCCGACTCCATGACACAAGATGCCCAG 15780 Query 254262 TCCGCCCTCCGCCGAACGATGGAGACGCACTCCGTTGTGACGCGTTTTTGCCTGGTGTGC 254321 ||| || || |||| |||||||| || | | || || || ||| || | ||| Sbjct 15779 AGCGCACTGCGAAGAACAATGGAGACATACAGCAAGATCACTCGCTTCTGCTTGATCTGC 15720 Query 254322 AACTACGTGTCGAAGATCATCGCCCCGCTGGCTTCTCGGTGCGCCAAGTTTCGATTCAGC 254381 ||||| || | ||||||| |||||| ||| ||| ||| |||||||||||||| Sbjct 15719 AACTATGTCACCCGAATCATCGACCCGCTCGCTAGTCGATGCAGCAAGTTTCGATTCAAG 15660 Query 254382 ACCCTCG 254388 | ||||| Sbjct 15659 AGCCTCG 15653 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073545287338496