Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20phaseoli_20[genbank_20GCA_5F001680515.1_202016-07-06] 16,072 sequences; 50,534,409 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq1855 152 7e-32 >seq1855 Length=7932 Score = 152 bits (168), Expect = 7e-32 Identities = 372/558 (67%), Gaps = 8/558 (1%) Strand=Plus/Plus Query 49960 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGT 50019 ||||| || ||| ||| ||||||||||| | | || || ||||||||||| || || Sbjct 1525 CATGCAAAGTCGGTGTGAAGACCCTCGTCACGAGAGATGAGCTCGTTGGAAAAGGTCAGG 1584 Query 50020 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAG 50079 || ||||| ||||||||||| || ||||| || ||||| ||||| | || |||||| Sbjct 1585 CCAGGCATGAGGCCACGCTTCTTGAGCCAGAAGATGGAGGCAAAGGCACCGCTGAAGAAG 1644 Query 50080 ATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATA--ACTGGCGC-TGTCATGT 50136 || || || || || |||||||| || || | || || | || | | |||| || Sbjct 1645 ATACCCTCGACGGCAGCAAAGGCGACGAGACGCTGAGCAAAGGACGAGTTCTTGTCCTGG 1704 Query 50137 ATCCA-CTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATT 50195 ||||| | || ||||| ||||||||||| | || || || || || ||||| || Sbjct 1705 ATCCATCGGATG-GCCCAGTCGGCCTTCTTGCGGATGCAGGGGATGGTCTCAATGGCGTT 1763 Query 50196 AAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACAT 50255 ||||| ||| || || | | || || | || || || || | || || | Sbjct 1764 GAAGAGGTAGGTTCGTTGAGCAGGCTCCTTGATGTAGGTGTCAATGAGGAGCGAGTAGGT 1823 Query 50256 TTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAAT 50315 || || || ||||| || || ||||| || |||||||| |||| ||||||| || Sbjct 1824 CTCGGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCATCGGGCCTCGGGGAT 1883 Query 50316 CTGCACTTCTGTACAAAATCGTTCAGCTAAATTTTCATTCACTATTCCGTCACTGGCTGC 50375 ||| || || | ||||| || | | || || || || || |||||| ||| || Sbjct 1884 CTGGACCTCGCCGCTGAATCGCTCGACAAGGTTCTCGTTGACGATGCCGTCAGAGGCAGC 1943 Query 50376 AAAAAACGCCAATACATGTTTTATAAAATGTTTTTCGTTGGGTGTTA---GTTTATTCCA 50432 || || || | | || | || | |||| || || | | || ||||| Sbjct 1944 GAAGAAGGCGAGGATGTGGGAGACGAAGAACTGCTCGTCGGCAGTCAGGCGGTTGTTCCA 2003 Query 50433 ATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTT 50492 || | || ||| || |||| ||| | || || | ||||| || || ||||| ||||| Sbjct 2004 GTCGTGGAGATCCTTGGATAGATCAATCTCCTCGGCAGTCCAGAAAGAGGCCTCGGCCTT 2063 Query 50493 TTTATACATATTCCAGAT 50510 || ||||| | |||||| Sbjct 2064 CTTGTACATCTGCCAGAT 2081 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718124499798080