Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20phaseoli_20[genbank_20GCA_5F001680515.1_202016-07-06] 16,072 sequences; 50,534,409 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq1855 176 8e-39 seq2463 170 4e-37 seq230 167 4e-36 seq771 161 2e-34 seq1457 104 4e-17 >seq1855 Length=7932 Score = 176 bits (194), Expect = 8e-39 Identities = 562/864 (65%), Gaps = 21/864 (2%) Strand=Plus/Plus Query 9935 CATGACGCCCGCCTTCTGGTACTCCGATACCCGGCGCTCGAAGAAGTTGGACTTGCCCTC 9994 || ||| || ||||||||||| || || || |||||||||||||| |||||| | Sbjct 1221 CAGGACACCAGCCTTCTGGTAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCACC 1280 Query 9995 GAGGGAAATGAGCTCCATGAAGTCAAAGGGGTTCTCGGCGCCAAACTGCTTGGGGTAACC 10054 |||||| ||| |||||||||||| |||||||| ||| | ||| || || Sbjct 1281 GAGGGAGATGTTCTCCATGAAGTCGAAGGGGTTGGTGGCCTTGTAGACCTTCTCGTTGCC 1340 Query 10055 GAGTGCTGTGAAAATGCGGTCAGCCACGAACTCGATGTACTGGCTCATCAGGTCCGAGTT 10114 ||| || || | |||||| || ||||||||||||||||| |||| ||||| | ||| Sbjct 1341 GAGGGCGACGAGGAGGCGGTCGGCGACGAACTCGATGTACTGCTTCATGAGGTCGGCGTT 1400 Query 10115 CATGCCAATCATGCGGCAGGGGATGGCGTCGCAAATGAAGTCCTTTTCGTTGGCGACCGC 10174 |||||| | || | |||||||| ||| ||| | ||| |||| || ||| ||| || Sbjct 1401 CATGCCGAGCAGGGCGCAGGGGAGGGCCTCGGTCAGGAACTCCTGCTCAATGGTGACGGC 1460 Query 10175 TTCCTCGACGATGCTCT---TTACC-ACGTCAAGGGACAGCTTGTTCTCGAGCTTCGAAT 10230 || || |||| || | ||| | | || || || || ||| | || | Sbjct 1461 ATCGGTGATGATGTCCTGGATGACCTGCTTGCTGGCACGGC----CCTTGAGGTGGGAGT 1516 Query 10231 ACAGGAGCTCTCCAAACTGCTGGTGGAGGCCCTCGTCGCGGCTGATGAACTCGTTGGACA 10290 ||||| | |||| | ||| || |||||||| || ||||| ||||||||| | Sbjct 1517 GGAGGAGGCATGCAAAGTCGGTGTGAAGACCCTCGTCACGAGAGATGAGCTCGTTGGAAA 1576 Query 10291 AACCCAGACCGGGCATGAGCCCCCGGTTGCGCAGCCAGAAAATGGCGCAGAACGACCCGG 10350 | ||| || |||||||| || || || |||||||| |||| | || | ||| Sbjct 1577 AGGTCAGGCCAGGCATGAGGCCACGCTTCTTGAGCCAGAAGATGGAGGCAAAGGCACCGC 1636 Query 10351 AGAACAGAAGACCCTCCACGCACACCCAGGCGACGAGGCGCTCTGCGAAGGA-GCGGTC- 10408 ||| | | |||||| ||| | |||||||||| |||| || ||||| | | || Sbjct 1637 TGAAGAAGATACCCTCGACGGCAGCAAAGGCGACGAGACGCTGAGCAAAGGACGAGTTCT 1696 Query 10409 -GCGCGAAAAGTATTTCGAGGCCCACGCTGCCTTCTTTCCCACGGCAGGGATCGTCTCGA 10467 | | | || |||||| | |||||||| | | | ||||| ||||| | Sbjct 1697 TGTCCTGGATCCATCGGATGGCCCAGTCGGCCTTCTTGCGGATGCAGGGGATGGTCTCAA 1756 Query 10468 TAGCCTCGAAGAGCTTGTTACGCTCGGTCTCGTCCTCAATAAGAGCATCAAGGAGCAGGG 10527 | || | |||||| | | | || | | |||| || | |||| ||| || | Sbjct 1757 TGGCGTTGAAGAGGTAGGTTCGTTGAGCAGGCTCCTTGATGTAGGTGTCAATGAGGAGCG 1816 Query 10528 AGTATTGCTCGCTGTGGACGCTCTCATTGTACCCCTGGTAAGCGTAGAA-CATACGTGCC 10586 |||| |||| ||||| | |||| | |||| | ||||||| ||| || ||| Sbjct 1817 AGTAGGTCTCGGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCAT-CGGGCC 1875 Query 10587 GAGGGGTCCGTGACTTCCTCGGCAAAGTTGTTGTTCAGGTTCTCCATCACCATGCCATCG 10646 |||| | ||| || || || | | |||||||| | || ||||| || Sbjct 1876 TCGGGGATCTGGACCTCGCCGCTGAATCGCTCGACAAGGTTCTCGTTGACGATGCCGTCA 1935 Query 10647 CTGCCTGCAAAGAAGCCGAGGATGTGCTTGATGAAGTGGCGCTCATCATCGTTCA----G 10702 | | || |||||| |||||||||| || |||| |||| || | ||| | Sbjct 1936 GAGGCAGCGAAGAAGGCGAGGATGTGGGAGACGAAGAACTGCTCGTCGGCAGTCAGGCGG 1995 Query 10703 TTTTTCACGCCAGTCTACCACATCCTGGTTGAGCTGGACCTCCTCCACGGTCCAGAAAGT 10762 || || |||||| | ||||| | || | | |||||| | |||||||||| Sbjct 1996 TTGTT----CCAGTCGTGGAGATCCTTGGATAGATCAATCTCCTCGGCAGTCCAGAAAGA 2051 Query 10763 GGCAACGGCCTTCTTGTACATCTG 10786 ||| ||||||||||||||||||| Sbjct 2052 GGCCTCGGCCTTCTTGTACATCTG 2075 >seq2463 Length=5590 Score = 170 bits (188), Expect = 4e-37 Identities = 174/227 (77%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || ||||| || || | |||| ||| || || ||||| || |||||||| || ||| | Sbjct 1603 CCACCGCGCAGACGAAGAACCAGGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTCGCTG 1544 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | || || || | |||||| ||||| || ||||||| ||||| || || ||| Sbjct 1543 AGAGTTCGGCCGTCCTCGAGCTGCTTGCCGGCAAAGATGAGTCGCTGTTGATCAGGAGGA 1484 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 |||||||||||||| || ||||| | || || || |||||||| | ||||| || Sbjct 1483 ATGCCTTCCTTGTCCTGGATCTTCGATTTCACATTGTCAATGGTGTCGGACGATTCCACC 1424 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | ||||||||| ||||| ||||||||||||||||| |||||||| Sbjct 1423 TCAAGGGTGATGGTCTTTCCGGTGAGGGTCTTGACGAAGATCTGCAT 1377 Score = 145 bits (160), Expect = 1e-29 Identities = 154/203 (76%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || |||||||| | || | ||| || || ||||| || |||||||| ||||||||| Sbjct 1100 CCACCACGAAGGCGGAGGACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAATCGGAG 1041 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | ||||| || | |||||| |||||||| || || | || |||||||| || Sbjct 1040 AGGGTGCGGCCATCCTCAAGCTGCTTGCCGGCGAAAATCAGGCGCTGCTGGTCGGGGGGG 981 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||| |||||||| |||||||| | |||||| |||||||| || | || || || Sbjct 980 ATGCCCTCCTTGTCCTGAATCTTCGACTTGACATTGTCGATGGTATCCGAGGACTCGACC 921 Query 68415 TCCAAGGTGATGGTTTTTCCCGT 68437 || | ||| ||||| || ||||| Sbjct 920 TCGAGGGTAATGGTCTTGCCCGT 898 Score = 145 bits (160), Expect = 1e-29 Identities = 164/220 (75%), Gaps = 0/220 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || ||||| | || | ||| || || ||||| || || ||||| || |||| | Sbjct 1375 CCACCACGGAGGCGGAGGACGAGGTGGAGTGTTGACTCCTTCTGAATGTTGTAGTCGGCG 1316 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | ||||| || | |||||| |||||||| || || | || ||||| || ||| Sbjct 1315 AGGGTGCGGCCATCCTCAAGCTGCTTGCCGGCGAAAATCAGGCGCTGCTGGTCAGGAGGA 1256 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || || ||||| ||||| ||||| | ||||||| ||||| ||||| | || || || Sbjct 1255 ATACCCTCCTTATCTTGGATCTTCGACTTGACGTTGTCGATCGTGTCGGAAGACTCCACC 1196 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATA 68454 || | |||||| || || || |||||||||||||||| || Sbjct 1195 TCGAGGGTGATAGTCTTACCAGTGAGGGTCTTGACGACTA 1156 >seq230 Length=29054 Score = 167 bits (184), Expect = 4e-36 Identities = 673/1038 (65%), Gaps = 44/1038 (4%) Strand=Plus/Minus Query 224981 CGCCACTGGATGTACTGGTTGGGGGTCATGTCCAGGTGGTTCTCAATATGGTGGAAAGCA 225040 |||||||||||||||| | ||||||| ||||||||||||| || || || |||||| Sbjct 24232 CGCCACTGGATGTACTCGGAGGGGGTCTTGTCCAGGTGGTTATCGATGTGAGCGAAAGCG 24173 Query 225041 TGCTGGGCTACGTACGCCATGCGCATGTTGGGATGCTTCCACA-CAGAGCCCCGAGTCGG 225099 ||||| | ||| || || || ||||| |||| | | | | || || || Sbjct 24172 TGCTGCTTGATGTAGGCGATACGGATGTTCTCGTGCTGGTAGATCTCACCCTCGGTGGGG 24113 Query 225100 TTGTGCCTCGCCGGTGAGGACCTTGATGAGCGTAGTCTTGCCCGCACCATTGGGGCCAAT 225159 || | ||| || |||||||| |||||||| || | |||||| ||||| ||||| || || Sbjct 24112 ATGAG-CTCACCAGTGAGGACGTTGATGAGGGTGGACTTGCCGGCACCGTTGGGACCGAT 24054 Query 225160 CACGCCAATCCGGGATGACATTGCAACCTG---CGAGTTCACGTTG--CTGAAGATCTCA 225214 ||| |||| ||||| || | ||| ||| | || || |||| | | | Sbjct 24053 GACGGCAATACGGGAGCCCAGGGAGCACTGGAAGGAGATGTCGGTGATCTGAGGCTTGGA 23994 Query 225215 GGGCCAGTTTGGTAAGCAAAGGCCA------CGCCACGCAGCTTCATGATGGCACGGTCC 225268 || | | |||| |||| || | ||||||| |||||| | || Sbjct 23993 GGTACCG--GGGTACTGGAAGGACATCTTGGTGGCACGCAG------GATGGCCTTGGCC 23942 Query 225269 TTGGAAGTAATACCCTCCAGGAACCCGGGCTCGGGGAACTCCCACTTGGTCACCGCGTCC 225328 |||| | | |||||| ||||| |||||||| ||||| ||| | || | | | | Sbjct 23941 TTGGTCTTGACACCCTCGAGGAAACCGGGCTCAGGGAAGGAGAACTCGATCTCGGAGGCA 23882 Query 225329 TTCAGGTCGTAGTAAGAT---GCAGCCTCGGGTCGCTTTGCCACGAAAGCAGACAGGTTT 225385 || |||||||||||| |||| ||| ||| || |||||||||| |||||| Sbjct 23881 CCGAGCTCGTAGTAAGATCGGGCAG--AGGGGACGCGCTG-GACGAAAGCAGCCAGGTTA 23825 Query 225386 CCGAGGTGCTTCGTGAGCTTGAGGTTCTTCTCGTAATGAACAAT-TGCCGAGCACACTGC 225444 || || | ||||||||| | |||||| || ||||| ||| | ||| || Sbjct 23824 CCCTTGTAGCGCTTGAGCTTGAAG---CGCTCGTAGTGGACAATGTGCTG-GCAGACGTT 23769 Query 225445 GTCAAGGAAGCCAGAGTCGTGGGACACAATGATGGACG-ACACGTTCGTCAGGCCCTTGA 225503 ||| |||||||||||||||||||| || |||||||| | || | | | | ||| Sbjct 23768 GTCGAGGAAGCCAGAGTCGTGGGAGACGATGATGGAGGTGCAAG---GAGA-GTTGGTGA 23713 Query 225504 GGTGCGTGATGAGCCATGCCACGTTGCTGACGTCCATGTGGTTTGTAGGTTCGTCCAGAA 225563 ||| | |||||| ||||| | || || | ||||| ||||| ||||| || | Sbjct 23712 GGTACTCCTCGAGCCACTTGACGTTCTTCACATCTAGATGGTTGGTAGGCTCGTCTAGCA 23653 Query 225564 GCAGGATGTCAGCATCAATGAGGATGGCGCGCGTGAGAGACAGCTTCATTTTCCAGCCCC 225623 |||| || || | | | || || ||| || |||| |||||||| ||||| || | Sbjct 23652 GCAGAATATCGGGAGCCTCGAAGACGGCACGGCACAGAGCGAGCTTCATCTTCCAACCAC 23593 Query 225624 CGGACAGGGAGCCGATTGAAACAGAGTGC-TTAGCTTCGTCAAAGCCGTACTCCAGGAGC 225682 |||| |||| ||| |||| | || || ||| |||||| | || |||| Sbjct 23592 CGGAGAGGGCAGTGATCTCGCCAGAAACCATTTGC-TCGGTGAAGCCGAAGTCGTTGAGC 23534 Query 225683 GTCTGGA--TAATGCGCTCGGGAG-AGCTGCGAGCGGCAACGTTGGGGTCGGACGAGAGG 225739 || || || | | ||||| | || | |||| || | | | | | Sbjct 23533 TGCTTGACGACATCCTCCTGGGAGTTGGTGACACCGGCCTCGGCGAGCTTCTTCATGGTC 23474 Query 225740 TAATCATATACGGTCATGTCCGAGACAGACGCGTCAATGTCGTGGTCCACGTACACCGTC 225799 | ||| |||||| || | | ||| | ||| | |||||| || ||| | || ||| Sbjct 23473 CAGTCAATGGTGGTCATCTCAGTGTCAGCAGAGTCCAGGTCGTGCTCGACGAAGACGGTC 23414 Query 225800 CGGAGCT-GAGAAGCATCGGGGAAGCCCTCCAGCTGGCCATTTGCAATCGCACGGAGCAG 225858 || || | || | |||||| ||||| | ||| | || || ||||| | || Sbjct 23413 TTGACCTCGCTCTGC-TTGGGGAAACCCTCAACCTGCTCGTTGTTGATGGCACGCATGAG 23355 Query 225859 GGTACTCTTGCCCGCGCCGTTGGGACCGATGAGGCCGTAATGATTCCCGCGCTTGATGTT 225918 || |||||| | |||||||||||| || ||||| | | || ||||||| | Sbjct 23354 AGTGGACTTGCCGGAACCGTTGGGACCGCAAAGACCGTAGCGCTGGCCACGCTTGAGGCG 23295 Query 225919 GAGGCGCGTGGAGTTCAGGAGGATCTTGCCACCATAGGCAAGGGAGAACTCGCAATCGCA 225978 |||| | || ||| || || |||||| |||| |||||||| ||||| || | ||| Sbjct 23294 GAGGTGAGTCTGGTTGAGCAGAATCTTGGCACCGTAGGCAAGAGAGAAAGTACAGTTGCA 23235 Query 225979 CAGGTCCTCACCCTCCTC 225996 || |||||||||||||| Sbjct 23234 AAGATCCTCACCCTCCTC 23217 >seq771 Length=15780 Score = 161 bits (178), Expect = 2e-34 Identities = 172/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || ||||| | |||| ||| || ||| ||| || |||||||| || ||| Sbjct 5257 CCACCACGCAGGCGGAGGACCAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGCTC 5316 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | ||||| || | |||||| || || || ||||||| || |||||||| || Sbjct 5317 AGGGTGCGGCCATCCTCGAGCTGCTTGCCAGCAAAGATGAGTCGCTGCTGGTCGGGGGGG 5376 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||| |||||||| || ||||| | ||||||| ||||||||||| | || || || Sbjct 5377 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACC 5436 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | |||||| || || ||||||||||||||||| || |||||||| Sbjct 5437 TCGAGGGTGATTGTCTTCCCCGTGAGGGTCTTGACAAAGATCTGCAT 5483 >seq1457 Length=11578 Score = 104 bits (114), Expect = 4e-17 Identities = 146/205 (71%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 224978 TACCGCCACTGGATGTACTGGTTGGGGGTCATGTCCAGGTGGTTCTCAATATGGTGGAAA 225037 || |||||||| | |||||||||||||||| | || || || |||| | || | | | Sbjct 10872 TAACGCCACTGAAGGTACTGGTTGGGGGTCTTCTCGAGATGCATCTCGACGTGCTCCAGA 10813 Query 225038 GCATGCTGGGCTACGTACGCCATGCGCATGTTGGGATGCTTCCACACAGAGCCCCGAGTC 225097 || ||||| | ||| | || |||| |||||| |||||| || || ||| Sbjct 10812 GCGTGCTGCTTGATGTAGCCGATACGCAAGTTGGGGTGCTTCTCGACCTTTCCGGTAGTA 10753 Query 225098 GGTTGTGCCTCGCCGGTGAGGACCTTGATGAGCGTAGTCTTGCCCGCACCATTGGGGCCA 225157 || | |||||||||||| | |||||| || |||| |||||| || || ||||||||| Sbjct 10752 GGAATGGTCTCGCCGGTGAGCAACTTGATCAGGGTAGACTTGCCAGCTCCGTTGGGGCCA 10693 Query 225158 ATCACGCCAATCCGGGATGACATTG 225182 || | | ||| ||||| |||| || Sbjct 10692 ATGATGGCAACACGGGACGACAGTG 10668 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921437246059840