Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20phaseoli_20[genbank_20GCA_5F001680515.1_202016-07-06] 16,072 sequences; 50,534,409 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq1450 499 6e-136 seq1855 399 4e-106 >seq1450 Length=10739 Score = 499 bits (552), Expect = 6e-136 Identities = 1245/1870 (67%), Gaps = 53/1870 (3%) Strand=Plus/Plus Query 243737 ACGCTGAACTGGACGGGTGCGACGGCGGCCTTGGTCCTCAGGTAGTACATGCCGGTCTTG 243796 ||| ||||| ||| ||| || |||| |||| || | ||||||||||||||| ||||| Sbjct 16 ACGGTGAACGGGATGGGAGCAGCGGCAGCCTGCGTTCGCAGGTAGTACATGCCCGTCTTC 75 Query 243797 AGTCCACTGGACCAGGCGTGGAGGTGCATGGCCGTCAGCTTCTTCATCTTGAGCTTTGGG 243856 || || |||| || | ||||||| || | ||| ||| || | Sbjct 76 AGGCCGAGCTTCCAGCCGGCAAAGTGCATGCTGGTGATCTTGCCCATGGTGGG------- 128 Query 243857 TCGTCCTCGCACAGAAAGAGGTTGAGGGACTGGCTCTGGTCGACGAAGGGCGCCCGCTCT 243916 ||||| || || ||||||||||||| ||| || | ||||| | || || Sbjct 129 --GTCCTT---CATGTGGATGTTGAGGGACTGGGACTGATCAATGAAGGCACCTCGGTCG 183 Query 243917 GCGGCCATGGTGATGAGGTCCTT---CTGAGATATCTCATACGCCGTCTTGTAGATGGGC 243973 || ||||| ||| | | ||| ||| || ||||| | | |||||||||| || | Sbjct 184 GCAGCCATC-TGA--ACGACCTGGCGCTGCGAAATCTCCCAGACGGTCTTGTAGAGGGCC 240 Query 243974 TTGAGGTGCTCGGGGAACCCTTCGATGTTCTGCACCGAGCCCTTGTGGACGATGAGCTGG 244033 |||| | |||||| ||||||||| | || || || | | | |||| || Sbjct 241 TTGACCTCGGCGGGGATGTTGGGGATGTTCTGGATGGAACCGTTCTCGGCAATGATTCGG 300 Query 244034 GTGCGCATGTTATCGTTCCACAGGCCCAAGCGCTCCAGCGCCTCGACCAGGTGCCTGTTC 244093 | |||| ||| ||||||||||| | | || ||| || ||| ||| Sbjct 301 TTTTTCATGGCATCCGACCACAGGCCCATGTCAACAAGGTCCTTGAGCAGCCAGGGGTTG 360 Query 244094 ACCACCTGAAACTCTCCCGACAGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGCGGCTCG 244153 || ||||| ||||| || | || || ||||||||||||| |||| | || |||||| Sbjct 361 ACGACCTGGAACTCGCCAGCGAGGACACGGCGCTGGTAGATGTTGGAGGTGTAAGGCTCG 420 Query 244154 ATGCTCTCCGTGTTGCCCAGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGACACCAGC 244213 | || ||| |||||||||| ||||||| || || ||||| ||||| || | | |||| Sbjct 421 AAGCACTCGTTGTTGCCCAGGATCTGCGAAGTACTGGCAGTAGGCATAGGGGCAAGCAGC 480 Query 244214 AGACTGTTCCTCACGCCGTGCCTCTGGATGCGGAGTCTGAGCTCGTTCCAGTCCCACATG 244273 |||||||| | | ||||||| || || | | ||| | | ||||||||| | | Sbjct 481 AGACTGTTGCGAATGCCGTGCTCCTTGACCTGCTCCCGGAGGTTCTCCCAGTCCCAGAGG 540 Query 244274 CCCGAGAGGTCCTCGCGTTTGAGGCCCCACATGTCAAACTGCAGCAGCCCCTTGCTGACG 244333 | || ||| | || | || ||||||||| ||||| || | |||| | || Sbjct 541 TCAGA-AGG-CTTCACATT-------CCACATGTCGAACTGGAGAATACCCTCAGAGGCG 591 Query 244334 GGGCTGCCCTCGTAGGTCGGGTAGGGACCGTCGCGCTGGGCCAGCTT-ACAGCTCTCGTC 244392 || ||||| | |||| | ||||||||| || || |||||||| || | || Sbjct 592 GGAGAGCCCTTGAAGGTGGAGTAGGGACCCTCCTCCTTGGCCAGCTGCACCGAAGCAGT- 650 Query 244393 GAGGGCGGCGTAGTAGATGGTCTCGAAGATCATCTTGTTCATGTCGCGGGCCTTGCCGCA 244452 |||||| || | ||||||||||||||||||| |||||| | || || |||| | | Sbjct 651 GAGGGCAGCATGGTAGATGGTCTCGAAGATCTGCTTGTTGAGCTCACGAGCCTCGGGAGA 710 Query 244453 GGTGAAGGGGATGCCCATCATCATGAAGACGTCGGCCAGTCCCTGCACGCCGATGCCGAT 244512 ||| || |||| || | ||| | || || || ||||| || || | || || Sbjct 711 CTCGAAAGGCATGCGCAGAGCAAGGAAAGCATCAGCAAGACCCTGGACACCAACACCAAT 770 Query 244513 GGGTCTGTGTCGCTTGTTGGAGCGCATGGCTTCGGGCACGGGGTAAAAGTTGCCGTCGAT 244572 ||||| ||||||| ||||| | ||||| | || ||||| ||| ||||||| Sbjct 771 GGGTCGGTGTCGCATGTTGCTGTTGCGAGCTTCCGTAACAGGGTAGTGGTTCACGTCGAT 830 Query 244573 CACCTTGTTGAGGTTGCGGGTGATCATGCGGACGACGTCGGCCAGCAGCTGAAAGTCGTA 244632 | | |||| |||||||| || | | ||||||| || | ||| ||||| || Sbjct 831 AATCCTGTTCAGGTTGCGAACGACAACCTGTGTGACGTCGTGCAACTTCTGGAAGTCATA 890 Query 244633 CTCGTAGGGATCCTCGGCGATGGTGATCCTCACAAACTCGTTGAGGGCGACGCTGGCCAG 244692 | | | ||| ||| | || ||| || || | ||||| | || || Sbjct 891 ---GCAAGCATCATCGTAGTTGATGA-----ACGAAGGC----AGGGCCAGAGAAGCAAG 938 Query 244693 GTTGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGAGGTTACT 244752 ||||||||| || ||||| || | | | ||||| || ||||||||||||||| || Sbjct 939 GTTGCAGACAGCAACCTCATCAGGGGCGCAGTACTCGATAATCTCGGTGCAGAGATTGGA 998 Query 244753 GCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTTGTAGAG 244812 || |||||||||||||| || || ||| |||| ||||||| |||||||||||| Sbjct 999 GCTACGGATGGTGCCCAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGTGGTCCTTGTAGAG 1058 Query 244813 CATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGAGGTCCCTAGC 244872 ||||||||| ||||||||| ||| || |||||| | | |||||| | | || Sbjct 1059 CATGAAGGGGTTGCCGGTCTCGGTCTGCGCCTCGAGGATGGCATACCAGAGCTTCTGGGC 1118 Query 244873 CTTGACCGTCCTGCGAGCCTTGCCCTCTGCCTCGTAGCGGGTGTACAGGGCCTCGAACTC 244932 ||| | ||| ||||| |||||||| | ||| || ||| || ||||||||||| Sbjct 1119 CTTCATGGTCTTGCGACCCTTGCCCGCCTTCTCATACTTTTCGTAAAGAGCCTCGAACTC 1178 Query 244933 GGGGCCCCAGACCTCGTCTAGGCCGGGGCACGACGCCGGG-CACATGAGACTCCACTCGC 244991 ||| || ||| | || ||||||||| || ||| |||||||| |||| || | Sbjct 1179 CTCGCCATAGCAGTCGGCCAGACCGGGGCAC-TCGTTGGGACACATGAGGGTCCAGTCAC 1237 Query 244992 CGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGAGGTCCC 245051 || | || ||| | || ||||||||| ||||| |||||||| ||| |||| ||||| | Sbjct 1238 CGTTCTTCTCGACACGCTTCATGAAGAGATCGGGAATCCAGAGAGCCAGGAACAGGTCGC 1297 Query 245052 TGGTCCTCTGCTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGACGTCGA 245111 || | ||| ||| ||| |||||| | ||| || | || |||||||| || Sbjct 1298 GGGCGCGGACCTCCTCCTTGCCGTGGTTCTTGCGCAGGTCAAGGAACTCAAAGACATCTG 1357 Query 245112 CGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCCCTGGTCCA 245171 ||||||||||||| | ||||| || | ||| || || ||||||||||| |||||||| | Sbjct 1358 CGTGCCAGGGCTCAAGGTAGATGGCAAAGGCACCAGGTCGCTTGTTGCCACCCTGGTCGA 1417 Query 245172 CCATCCTCTCGAGCG-CGTTGAAGATGCGCAGGGTAGGCACTATGCCGTTAGAGTGGCCG 245230 | || | || | |||||||| || || | || | ||||| ||| ||| Sbjct 1418 CGTACCGGGC-AGTGTTGTTGAAGACACGAAGCATGGGGGTGACACCGTTGGAGGTACCG 1476 Query 245231 TTGGTGCCCTTGATGTAGGCGCCCTTGCCCCTGAGGTTGCTGATGGACATGCCTAGTCCG 245290 ||||| || |||||| | ||| || | | || | || | || ||| | || Sbjct 1477 TTGGTACCAGCGATGTAAGAGCCAGTGGCACGGATTCGGTGGACGTTCAGGCCGATACCA 1536 Query 245291 CCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTGCTATGCCCTCCATGCTG 245350 || || ||||||||| | ||| ||| |||||| || || || ||||| |||||| Sbjct 1537 CCCGCCATCTTGGAGATCATGGCACAGGTCTTGAGAGTATCATAAATACCCTCAATGCTG 1596 Query 245351 TCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTGGGGCTTGGGGCTGCACGAGTTG 245410 ||| ||||||| || ||| ||||| ||||||||||| |||| ||| | | | ||| Sbjct 1597 TCCTCTTTCATGTCGACCAGGAAGCATGAGGACAGCTGAGGCTGGGGAGTACCAGCATTG 1656 Query 245411 AACAGAGTGGGGCTGGCGTGGGTAAAGTAGCGGCTCGAGAGGAACCCGTACGTCTGGAGC 245470 || || |||||| ||| ||||| ||| | |||||| | | ||| |||| || Sbjct 1657 AAGAGGGTGGGGGAGGCATGGGTGAAGAATTTGCTCGACATCAGGTTGTAGGTCTCCAGG 1716 Query 245471 AGAGCGTCGATGTTGTCGCCGTGGAT-CTGCAGGGCGCACCTCATGAGGGTGTGCTGGGG 245529 | | || || | ||| || ||| | | | | || | ||||| |||||||||| Sbjct 1717 ACACGCTCAATATCGTCACCCCAGATGCCGACAGACACA-CGCATGATCATGTGCTGGGG 1775 Query 245530 -CG-TC-TCGATGGGTCCCTCGGGTCCCTTGAGCATGTAGGAGCGCTCGAGCGTCTTGAA 245586 || || | || || || |||||| | |||||| ||||| || |||||||| Sbjct 1776 ACGCTCAACAATCTTGCCATC---AATCTTGAGGAGGTAGGATCGCTCAAGAGTCTTGAA 1832 Query 245587 CCCAAAGTAC 245596 ||||||||| Sbjct 1833 GCCAAAGTAC 1842 >seq1855 Length=7932 Score = 399 bits (442), Expect = 4e-106 Identities = 615/860 (72%), Gaps = 28/860 (3%) Strand=Plus/Minus Query 42300 ATCTGGTCCATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGAGGAGATTGACCTG 42359 |||||| |||||||||||||| || ||| |||||| |||||||||||||| || Sbjct 2081 ATCTGGCAGATGTACAAGAAGGCCGAGGCCTCTTTCTGGACTGCCGAGGAGATTGATCTA 2022 Query 42360 GCCAAGGACACGGCCGGCTGGGAGTCA-----CTGTCTGAGAACGAAAAGTTTTTCCTCA 42414 ||||||| || |||| | || ||| ||| |||| |||| ||| || Sbjct 2021 TCCAAGGATCTCCACGACTGGAA--CAACCGCCTGACTGCCGACGAGCAGTTCTTCGTCT 1964 Query 42415 AAAACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCA 42474 |||| || ||||||||||| |||||||||||||| ||||| |||||||| | | Sbjct 1963 CCCACATCCTCGCCTTCTTCGCTGCCTCTGACGGCATCGTCAACGAGAACCTTGTCGAGC 1904 Query 42475 GGTTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCA 42534 | |||| ||||| ||| | ||||| || |||||||||||||||||||| | Sbjct 1903 GATTCAGCGGCGAGGTCCAGATCCCCGAGGCCCGATGCTTCTACGGCTTCCAGATCATGA 1844 Query 42535 TAGAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCA---ACACGTACATCCTGGATC 42591 | |||||| | ||||| ||| ||| | || |||| |||| |||||| ||| | Sbjct 1843 TGGAGAACATCCACTCCGAGACCTACTC---GCTCCTCATTGACACCTACATCAAGGAGC 1787 Query 42592 CCGTCGAGCGTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGG 42651 | | | || | | || ||||| ||||| ||||| || ||||||||| ||||||| Sbjct 1786 CTGCTCAACGAACCTACCTCTTCAACGCCATTGAGACCATCCCCTGCATCCGCAAGAAGG 1727 Query 42652 CGGACTGGGCGCTCAACTGGATCGAGAGTCCCG-ACGCAACGTTCGGCGAGAGGCTGGTA 42710 | |||||||| || |||||| || | | | || | | || | || | || || Sbjct 1726 CCGACTGGGCCATCCGATGGATCCAG-GACAAGAACTCGTCCTTTGCTCAGCGTCTCGTC 1668 Query 42711 GCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTC 42770 |||||| | ||||||||||| ||||||||| || ||||| |||||||||||||||||| Sbjct 1667 GCCTTTGCTGCCGTCGAGGGTATCTTCTTCAGCGGTGCCTTTGCCTCCATCTTCTGGCTC 1608 Query 42771 AAGCAG-AAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGA 42829 ||| || || || ||||| || || ||||| || ||||| |||||| | ||||| Sbjct 1607 AAGAAGCGTGGCCTC-ATGCCTGGCCTGACCTTTTCCAACGAGCTCATCTCTCGTGACGA 1549 Query 42830 GGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTC-AGGCACAAGCCCT 42888 ||| || || | |||||||| |||||||| ||| ||||||| ||| | ||| Sbjct 1548 GGGTCTTCACACCGACTTTGCATGCCTCCTCCACTC---CCACCTCAAGGGCCGTGCCAG 1492 Query 42889 CGAAGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCCTCA 42948 | ||| || ||| || ||||||||| || ||||| || ||| |||||||||| | Sbjct 1491 C-AAGCAGGTCATCCAGGACATCATCACCGATGCCGTCACCATTGAGCAGGAGTTCCTGA 1433 Query 42949 CGCAGTCGCTGCCCGTGTCCCTGGTCGGCATGAACCACGACCTCATGTGCAAGTACATCC 43008 | || | || ||| ||||| ||||||||||| |||||||||| |||||||| Sbjct 1432 CCGAGGCCCTCCCCTGCGCCCTGCTCGGCATGAACGCCGACCTCATGAAGCAGTACATCG 1373 Query 43009 AGTACGTCGCCGACCATCTCCT-GT-GCCAGATGGGTCTC-AGCCGCCTCTACAACACGC 43065 ||| ||||||||||| ||||| || ||| | || | || | ||||||| | Sbjct 1372 AGTTCGTCGCCGACCGCCTCCTCGTCGCC--CTCGGCAACGAGAAG-GTCTACAAGGCCA 1316 Query 43066 CGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTTTTCGAGA 43125 | |||||||||||| |||||||||||||| | | |||||||||||||| ||||||| Sbjct 1315 CCAACCCCTTCGACTTCATGGAGAACATCTCCCTCGGTGGCAAGACCAACTTCTTCGAGA 1256 Query 43126 AGCGCGTCGCCGACTACCAG 43145 |||| |||| ||||||||| Sbjct 1255 AGCGTGTCGGTGACTACCAG 1236 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944149482254720