Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20phaseoli_20[genbank_20GCA_5F001680515.1_202016-07-06] 16,072 sequences; 50,534,409 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq2463 129 1e-24 seq771 116 9e-21 seq3425 95.1 3e-14 >seq2463 Length=5590 Score = 129 bits (142), Expect = 1e-24 Identities = 154/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || ||||| || || ||||||||||| |||| ||||||||| | || || | || ||| Sbjct 1816 AGAACAAGATGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGACCGTCT 1757 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 ||||||||||| || || ||||| || ||||||||||| || || || || ||| Sbjct 1756 TCCAGCTGCTTACCAGCAAAGATAAGTCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCC 1697 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 |||||||| ||||||| || | ||| || | | || || |||| ||||| ||| Sbjct 1696 TGAATCTTGGACTTCACGTTGTCAATGGTATCGCTCGACTCCACCTCCAGAGTGATGGTC 1637 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || |||||||| || ||||| || || Sbjct 1636 TTTCCAGTGAGAGTCTTGACAAAGATCTG 1608 Score = 118 bits (130), Expect = 2e-21 Identities = 146/200 (73%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| |||||||| || |||||||| || | ||||||||| || | || | ||||| Sbjct 1360 AGGACGAGGTGGAGTGTTGACTCCTTCTGAATGTTGTAGTCGGCGAGGGTGCGGCCATCC 1301 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || |||||||| |||||||| || || ||||||||||| ||| ||| || || || Sbjct 1300 TCAAGCTGCTTGCCGGCGAAAATCAGGCGCTGCTGGTCAGGAGGAATACCCTCCTTATCT 1241 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| ||| ||| |||| ||||| | | || || || | ||||| ||| Sbjct 1240 TGGATCTTCGACTTGACGTTGTCGATCGTGTCGGAAGACTCCACCTCGAGGGTGATAGTC 1181 Query 199598 TTACCCGTGAGAGTTTTCAC 199617 ||||| ||||| || || || Sbjct 1180 TTACCAGTGAGGGTCTTGAC 1161 Score = 116 bits (128), Expect = 9e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || || ||||| |||||||||||||| |||| ||||||||| | ||| | || || Sbjct 1588 AGAACCAGGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTCGCTGAGAGTTCGGCCGTCC 1529 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || |||||||| ||||| |||||||| ||||| || || ||| ||| ||||| ||| Sbjct 1528 TCGAGCTGCTTGCCGGCAAAGATGAGTCGCTGTTGATCAGGAGGAATGCCTTCCTTGTCC 1469 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| ||||| || | |||||| | | ||| || || | ||||| ||| Sbjct 1468 TGGATCTTCGATTTCACATTGTCAATGGTGTCGGACGATTCCACCTCAAGGGTGATGGTC 1409 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || ||||| || || || || || || Sbjct 1408 TTTCCGGTGAGGGTCTTGACGAAGATCTG 1380 Score = 104 bits (114), Expect = 6e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | ||||| |||||||| ||||||||||| |||| |||||| || | | || Sbjct 1094 CGAAGGCGGAGGACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAATCGGAGAGGGTG 1035 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | ||||| || |||||||| |||||||| || || ||||||||||| || || || Sbjct 1034 CGGCCATCCTCAAGCTGCTTGCCGGCGAAAATCAGGCGCTGCTGGTCGGGGGGGATGCCC 975 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || ||||||||||| ||| || |||| ||| || | | || || || | Sbjct 974 TCCTTGTCCTGAATCTTCGACTTGACATTGTCGATGGTATCCGAGGACTCGACCTCGAGG 915 Query 199589 GTGATCGTCTTACCCGT 199605 || || ||||| ||||| Sbjct 914 GTAATGGTCTTGCCCGT 898 >seq771 Length=15780 Score = 116 bits (128), Expect = 9e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| |||||||| || |||||| |||| ||||||||| || || | ||||| Sbjct 5272 AGGACCAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCC 5331 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || |||||||| || || |||||||| ||||||||||| || || || || ||| Sbjct 5332 TCGAGCTGCTTGCCAGCAAAGATGAGTCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCC 5391 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| ||| ||| |||| |||||| | | || || || | ||||| ||| Sbjct 5392 TGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACCTCGAGGGTGATTGTC 5451 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || |||||||| || || ||||| || || Sbjct 5452 TTCCCCGTGAGGGTCTTGACAAAGATCTG 5480 >seq3425 Length=3202 Score = 95.1 bits (104), Expect = 3e-14 Identities = 130/182 (71%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 199440 CCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCGGCGAAGA 199499 |||| |||| ||||||||| | | || | ||||| ||||||||||| || ||||||| Sbjct 2852 CCTTCTGGATGTTGTAGTCGGAAAGGGTTCGGCCATCCTCCAGCTGCTTGCCAGCGAAGA 2911 Query 199500 TGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTTCACGGATT 199559 | || |||||||||||||| || || || ||||| ||||| ||| || | Sbjct 2912 TCAGTCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGT 2971 Query 199560 CGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGTTTTCACAA 199619 | | |||||| | | || || || | ||||| ||||| ||||| || || ||||| | Sbjct 2972 CAATGGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACGA 3031 Query 199620 AA 199621 || Sbjct 3032 AA 3033 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178678833516824