Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20phaseoli_20[genbank_20GCA_5F001680515.1_202016-07-06] 16,072 sequences; 50,534,409 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq1188 192 7e-43 seq1855 156 5e-32 seq1450 129 7e-24 seq1349 125 9e-23 seq626 120 4e-21 seq243 93.3 5e-13 >seq1188 Length=13804 Score = 192 bits (212), Expect = 7e-43 Identities = 280/396 (71%), Gaps = 6/396 (2%) Strand=Plus/Plus Query 18100 GGCGAGTCGCACGGGGCGGGCGTCGGCTGCATCATCGACGGCGTGCCGCCGTGCATGCCA 18159 |||||||| ||||| | ||| |||||||||||| | || || ||| | Sbjct 2918 GGCGAGTCCCACGGCAAGTCAGTCTCGTGCATCATCGACAACTGCCCCCCCAACATTGCC 2977 Query 18160 CTGGCCGAGGCCGACATCCAGCCTCAGTTGGATCGGCGCCGACCGGGCCAGGGCGCACTT 18219 || ||||||||||||||||||| ||| | | || ||||| ||||||||| || | Sbjct 2978 CTCACCGAGGCCGACATCCAGCCCCAGCTCAACCGCCGCCGCCCGGGCCAGTCGGCCATC 3037 Query 18220 TCCACGCCGCGCAACGAGCCCGATCGCGTCATCATCCAGTCGGGCACGGAGAACGGCCTC 18279 | ||||| || ||||| ||||| |||| |||||| |||||||| ||||||||| || Sbjct 3038 ACGACGCCCCGGAACGAAAAGGATCGTGTCACCATCCACTCGGGCACCGAGAACGGCGTC 3097 Query 18280 ACGCTCGGCTCGCCCGTCGGCCTCTTTGTGGCCAACCGCGACCAGCGGCCCGTCGACTAT 18339 || |||||| | || || |||| || ||||| |||||||||||| ||||| Sbjct 3098 ACCCTCGGCACCCCGATCCTCCTCACCGTCCCCAACGAGGACCAGCGGCCCAAGGACTAC 3157 Query 18340 TCCGACATGTGCAAGG------TGCCGCGGCCCTCACACGCCGACTACACCTACATGGCC 18393 ||||| | || | ||||| ||| |||||||||| |||||| ||| Sbjct 3158 GGCGACAAGACCATCGACCTCTACCCGCGCCCCAGCCACGCCGACTGGACCTACCTGGAA 3217 Query 18394 AAGTACGGCATCAAGGCGTCGTCGGGCGGAGGCCGGTCGTCTGCCCGCGAGACCCTCATG 18453 ||||||||| ||||||| ||||| || || || || ||||| || |||||| || Sbjct 3218 AAGTACGGCGTCAAGGCCTCGTCCGGTGGTGGTCGCAGCTCTGCTCGTGAGACCATCGCT 3277 Query 18454 CGCGTCGCCGCCGGCGCGGTCGCCGAGAAATGGCTC 18489 | ||||||||||| || ||||| || || |||||| Sbjct 3278 AGAGTCGCCGCCGGTGCTGTCGCTGAAAAGTGGCTC 3313 Score = 118 bits (130), Expect = 1e-20 Identities = 119/155 (77%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 19047 GACAGCATCGGCGGCACGGTGACGTGCGTGTGTCGCAACGTGCCGGCAGGCCTCGGCGAG 19106 ||||||| ||||||||| || || ||||| || || ||||| | |||||||||||| Sbjct 3536 GACAGCACCGGCGGCACCGTCACCTGCGTCATCCGTAATGTGCCCTCTGGCCTCGGCGAG 3595 Query 19107 CCGTGCTTTGACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCGATCCCGGCCACC 19166 || ||||| |||||| | |||||| ||||| ||||||||| |||| ||||| ||| | Sbjct 3596 CCCTGCTTCGACAAGCTGCAGGCCGTCCTCGCACACGCCATGATGTCCATCCCCGCCGTC 3655 Query 19167 AAGGGATTCGAGATTGGCAGCGGGTTTGCGGGTGC 19201 |||| || ||| ||||| ||| ||| ||| || Sbjct 3656 AAGGCCTTTGAGTTTGGCTCCGGCTTTCTGGGCGC 3690 >seq1855 Length=7932 Score = 156 bits (172), Expect = 5e-32 Identities = 214/291 (74%), Gaps = 15/291 (5%) Strand=Plus/Plus Query 869179 ACCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTT 869238 ||| ||||| ||| ||| | |||||| ||||| ||||| ||||||||||| ||||| Sbjct 1545 ACCCTCGTCACGAGAGATGAGCTCGTTGGAAAAGGTCAGGCCAGGCATGAGGCCACGCTT 1604 Query 869239 CTTGAGCCAAAAGATGGCGCAGAAACTGC-CCG-AGAAAAAGATGCCCTCGACGGCGGCA 869296 ||||||||| ||||||| | | || || ||| ||| ||||| ||||||||||| ||| Sbjct 1605 CTTGAGCCAGAAGATGGAG--GCAAAGGCACCGCTGAAGAAGATACCCTCGACGGCAGCA 1662 Query 869297 AAGCCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTCCTTG---TTGATCCACTTCATC 869353 ||| ||| ||| |||| |||||| | |||| | |||| | |||||| || Sbjct 1663 AAGGCGACGAGACGCTGAGCAAAG--GACGAG----TTCTTGTCCTGGATCCATCGGATG 1716 Query 869354 GCCCAGTCGGCCTTTTTCCTCACCGACGGCACCGTGTCGATGGCGCGAAAGAGGT-GGTC 869412 |||||||||||||| || | | | || | || || |||||| ||||||| ||| Sbjct 1717 GCCCAGTCGGCCTTCTTGCGGATGCAGGGGATGGTCTCAATGGCGTTGAAGAGGTAGGTT 1776 Query 869413 CTTTTCGGCCGGGTCCTTGACATAGGTGTCGATCAGGAGCGAATAGGTCTC 869463 | || || || ||||||| |||||||| || |||||||| |||||||| Sbjct 1777 C-GTTGAGCAGGCTCCTTGATGTAGGTGTCAATGAGGAGCGAGTAGGTCTC 1826 Score = 154 bits (170), Expect = 2e-31 Identities = 185/250 (74%), Gaps = 1/250 (0%) Strand=Plus/Plus Query 868691 GCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATC 868750 ||||| ||| || || || ||| |||||| |||||||||||||| |||| ||||| Sbjct 1231 GCCTTCTGGTAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCACCGAGGGAGATG 1290 Query 868751 AACTCCATCCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAGCGACGCG 868810 |||||| | ||| ||||||| | ||||||| ||| ||| ||||| | || Sbjct 1291 TTCTCCATGAAGTCGAAGGGGTTGGTGGCCTTGTAGACCTTCTCGTTGCCGAGGGCGACG 1350 Query 868811 AGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGATG 868870 || |||||||||||||| |||||||||||||| ||||||| ||||||||||||||| Sbjct 1351 AGGAGGCGGTCGGCGACGAACTCGATGTACTGCTTCATGAGGTCGGCGTTCATGCCGAGC 1410 Query 868871 AGCGCCACCGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCGACGATG 868930 || || || || | |||| ||| ||||| | ||| || |||||| ||| |||| Sbjct 1411 AGGGCGCAGGGGAGGGCCTCGGTCAGGAACTCCTGCTCAATGGTGACGGCATCGGTGATG 1470 Query 868931 ATCTGCCTGG 868940 || | ||||| Sbjct 1471 ATGT-CCTGG 1479 >seq1450 Length=10739 Score = 129 bits (142), Expect = 7e-24 Identities = 299/448 (67%), Gaps = 17/448 (4%) Strand=Plus/Plus Query 1630065 CTGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTTGGA 1630124 |||||||||||| || || |||| ||| ||||| || |||||||| || |||||||| Sbjct 1410 CTGGTCGACGTACCGGGCAGTGTTGTTGAAGACACGAAGCATGGGGGTGACACCGTTGGA 1469 Query 1630125 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAAGCC 1630184 |||||||| || || | ||| | ||| | ||| || | ||| || | ||| Sbjct 1470 GGTACCGTTGGTACCAGCGATGTAAGAGCCAGTGGCACGGATTCGGTGGACGTTCAGGCC 1529 Query 1630185 GATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCCCTC 1630244 ||| || || ||| ||||||||| | || || ||||| || || || || ||||| Sbjct 1530 GATACCACCCGCCATCTTGGAGATCATGGCACAGGTCTTGAGAGTATCATAAATACCCTC 1589 Query 1630245 GATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGTGCC 1630304 || ||| | |||||||| || || ||||| || || || || || | || || Sbjct 1590 AATGCTGTCCTCTTTCATGTCGACCAGGAAGCATGAGGACAGCTGAGGCTGGGGAGTACC 1649 Query 1630305 GGCGTTGAAGAGCGTGGGCGTCGCCGCGGTGAACAACTGCCGCGACATGGCGTCGTAGGT 1630364 || |||||||| ||||| | || |||||| || | | |||||| || |||||| Sbjct 1650 AGCATTGAAGAGGGTGGGGGAGGCATGGGTGAAGAATTTGCTCGACATCAGGTTGTAGGT 1709 Query 1630365 GGCGAGCACGCGCGCCAGCGCATCGTCCACGTCGGCAAACCCATAGTGGCCGATGGCGAC 1630424 | || || ||| | | |||||| |||| || ||||| | || Sbjct 1710 CTCCAGGACACGCTCAA---TATCGTC-----------ACCC-CAGATGCCGACAGACAC 1754 Query 1630425 GCGCATGAGCATGTACTGGGGCCGCTCGACGACGACGCCGCGCACCTTGGTCAGGTAGGA 1630484 ||||||| ||||| |||||| ||||| || | ||| | |||| |||||||| Sbjct 1755 ACGCATGATCATGTGCTGGGGACGCTCAACAATCTTGCCATCAATCTTGAGGAGGTAGGA 1814 Query 1630485 CCGGCGCATG-GTCATGAGGCCAAAGTA 1630511 | || || | ||| ||| ||||||||| Sbjct 1815 TC-GCTCAAGAGTCTTGAAGCCAAAGTA 1841 Score = 113 bits (124), Expect = 6e-19 Identities = 288/443 (65%), Gaps = 8/443 (2%) Strand=Plus/Plus Query 1628162 ACTGGACGATCTCGGTGCACAGGTTGG-CCGACGTCGTCGTACCCAGGTTCTGCTGGTTG 1628220 ||| || ||||||||||| || |||| | ||| | || |||||||||| ||||||| Sbjct 971 ACTCGATAATCTCGGTGCAGAGATTGGAGCTACG-GATGGTGCCCAGGTTCTTCTGGTTG 1029 Query 1628221 GTGGTCAGGTTGACGGCGTCCTTGTGGAGCATGTAGGGCGCGCCGGTCTCGATCTGCGCC 1628280 | | ||||| | |||||||| ||||||| |||| |||||||||| |||||||| Sbjct 1030 CTCTTGCGGTTGCAGTGGTCCTTGTAGAGCATGAAGGGGTTGCCGGTCTCGGTCTGCGCC 1089 Query 1628281 GCGACGATGGCCGACCAGATCTGGCGCGCGGGCACGACAGTCCGCGCGCGGCCCTNNNNN 1628340 ||| |||||| |||||| || | || || | | || | |||| Sbjct 1090 TCGAGGATGGCATACCAGAGCTTCTGGGCCTTCATGGTCTTGCGACCCTTGCCCGCCTTC 1149 Query 1628341 NNNNNNNNNNNNNNNNNNNNNTCAAAGGCCGCGCCGTAGCACTCGTGCAGGCCGGGCGCC 1628400 || || || |||| ||||| ||| ||| ||||| | Sbjct 1150 TCATACTTTTCGTAAAGAGCCTCGAACTCCTCGCCATAGCAGTCGGCCAGACCGGGGCAC 1209 Query 1628401 TCGGACGGACAAAAGAGCGACCAGTCGCCACCGGTCACCGCG---CGGCGCATAAAGAGG 1628457 ||| ||||| | ||| | ||||| ||||| || | || || ||| ||||| Sbjct 1210 TCGTTGGGACACATGAGGGTCCAGT---CACCGTTCTTCTCGACACGCTTCATGAAGAGA 1266 Query 1628458 TCACACGTCCACAGTGCGTAAAAGAGGTCGCGCGCCCGGTTCTCCTCCTTGCCGTGGTTC 1628517 || |||| || || || |||||||| || ||| ||||||||||||||||||| Sbjct 1267 TCGGGAATCCAGAGAGCCAGGAACAGGTCGCGGGCGCGGACCTCCTCCTTGCCGTGGTTC 1326 Query 1628518 TTTTTGAGGTCGAGCCAGTCGACAATGTCGGCGTGCCACGGCTCCAGGTAGCAGGCAAAG 1628577 || ||||| || | || | | || |||||||| ||||| |||||| ||||||| Sbjct 1327 TTGCGCAGGTCAAGGAACTCAAAGACATCTGCGTGCCAGGGCTCAAGGTAGATGGCAAAG 1386 Query 1628578 GCGCCCTTGCGCTTGCCGCCGCC 1628600 || || |||||| ||| || Sbjct 1387 GCACCAGGTCGCTTGTTGCCACC 1409 Score = 102 bits (112), Expect = 1e-15 Identities = 359/549 (65%), Gaps = 20/549 (4%) Strand=Plus/Plus Query 1626977 CTGACTGGTCGACGGTAAACTGGATGGCGTCGGCGGCGGGCCTG-GTGCGCAGATAGTAC 1627035 ||| | |||||||||| ||| |||||| | ||||| | |||| || ||||| |||||| Sbjct 5 CTGCCGGGTCGACGGTGAACGGGATGGGAGCAGCGGCAG-CCTGCGTTCGCAGGTAGTAC 63 Query 1627036 ATGCCGGTCTTGAGGCCGCGGCGCCACGCGTAGGCGTGCATCGACGTGATGC-GCTCGGG 1627094 ||||| ||||| |||||| | ||| || |||||| ||||| || | | Sbjct 64 ATGCCCGTCTTCAGGCCGAGCTTCCAGCCGGCAAAGTGCATGCTGGTGATCTTGCCCATG 123 Query 1627095 CGTCGCGTCGGCGCAGTACAGGTTGAGCGACTGGCTCTGGTCGACATAGGGCGCGCGATC 1627154 || | ||| || | |||||| |||||| ||| || | ||| | || || Sbjct 124 -GTGGGGTCCTTCATGTGGATGTTGAGGGACTGGGACTGATCAATGAAGGCACCTCGGTC 182 Query 1627155 GGCCGCCATGTCGATGGTGACCCGGTTGGGC---ACCTCCCACACGGTCTTGAAGATGGC 1627211 ||| ||||| | | | ||| || || | |||||| ||||||||| ||| ||| Sbjct 183 GGCAGCCATCTGAACG---ACCTGGCGCTGCGAAATCTCCCAGACGGTCTTGTAGAGGGC 239 Query 1627212 CTTGAGGTCGGGCGGCACCTCGTCGTCGCCAAAGCCCTGCACCGAGCCGTGCGCCGCGAC 1627271 ||||| |||| || | | | | | | ||| | || |||| | | || | Sbjct 240 CTTGACCTCGGCGGGGATGTTGGGG------ATGTTCTGGATGGAACCGTTCTCGGCAAT 293 Query 1627272 GAGCCTGTCGCGAAAGTCGGGCGTCCACAGGCCGCGCGCCATCA-GGCGCTTGACCAGGT 1627330 || | || | | | || ||||||||| | | || || || ||||| ||| Sbjct 294 GATTCGGTTTTTCATGGCATCCGACCACAGGCC-CATGTCAACAAGGTCCTTGAGCAGCC 352 Query 1627331 GGCGGTTGACCACGGTAAAGTCGCCCGAGAGCACGCGGCGCGTGTAGATGTTGTTGGTGA 1627390 | ||||||| || || ||||| | ||| || |||||| |||||||||| |||| Sbjct 353 AGGGGTTGACGACCTGGAACTCGCCAGCGAGGACACGGCGCTGGTAGATGTTGGAGGTGT 412 Query 1627391 TGACCTCGCACGCCTCGGTGTTGCCCAGGATCTGCGACGTCGTGGCCGTGGGCATGAGCG 1627450 |||| | |||| ||||||||||||||||||| || |||| || ||||| | | Sbjct 413 AAGGCTCGAAGCACTCGTTGTTGCCCAGGATCTGCGAAGTACTGGCAGTAGGCATAGGGG 472 Query 1627451 CCACGAGGAGCGAGTTGCGCAGGCCGTGCT-GTCGAACTAGCGCGCGCAGCGCGTCCCAG 1627509 | | || || |||||| | |||||||| | || || || | || || |||||| Sbjct 473 CAAGCAGCAGACTGTTGCGAATGCCGTGCTCCTTGACCT-GCTCCCGGAGGTTCTCCCAG 531 Query 1627510 TCCCAGCGG 1627518 |||||| || Sbjct 532 TCCCAGAGG 540 >seq1349 Length=11557 Score = 125 bits (138), Expect = 9e-23 Identities = 93/109 (85%), Gaps = 0/109 (0%) Strand=Plus/Minus Query 1592186 GCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAAC 1592245 ||| ||||||| |||||||||||||| || || ||| | || |||||| | || |||||| Sbjct 8997 GCCTCCAACTATCTCGACATCAAGCCCCTTCTTGATGTCGGCTGCAAGACCGTCGCCAAC 8938 Query 1592246 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCA 1592294 ||||||||||||||||| ||||||||||| || ||||| || ||||||| Sbjct 8937 ATGATCAAGGGCAAGTCTCCCGAGGAGATTCGGAAGACTTTCAACATCA 8889 >seq626 Length=19201 Score = 120 bits (132), Expect = 4e-21 Identities = 140/189 (74%), Gaps = 0/189 (0%) Strand=Plus/Plus Query 1574046 AAGAGGATCGACCTGCCGCCCGGACGCCACAAGGTGATCATCCTCGACGAGGCCGACTGC 1574105 |||| | || ||||||| |||| ||||||||| || ||||||||||||| || ||| || Sbjct 6214 AAGAAGGTCACCCTGCCGGCCGGCCGCCACAAGCTGGTCATCCTCGACGAAGCTGACAGC 6273 Query 1574106 CTCACGTCGGCGGCCCAGCAGGCCCTGCGGTCCACCATGGAAAAGCACACCAACACGACG 1574165 | || |||| |||||||| || || || |||||||||| || |||||||||| Sbjct 6274 ATGACCTCGGGCGCCCAGCAAGCACTCCGACGAACCATGGAAATCTACTCCAACACGACC 6333 Query 1574166 CGCTTTGCCCTGGCGTGCAACACGTCGTCGATGGTCATCGAGGCCCTCCAAAGTCGCTGC 1574225 | || ||| | || |||||| ||| | | |||||||| |||| ||| || ||| Sbjct 6334 AGATTCGCCTTTGCCTGCAACCAGTCCAACAAGATCATCGAGCCCCTACAATCGCGATGC 6393 Query 1574226 GCCATTCTG 1574234 ||||| ||| Sbjct 6394 GCCATCCTG 6402 >seq243 Length=28623 Score = 93.3 bits (102), Expect = 5e-13 Identities = 257/386 (67%), Gaps = 16/386 (4%) Strand=Plus/Plus Query 511949 GGCGTGGACGCCTCGCGCAGTCACACCAACGACATCAACCGCGTGGCCGCCGTGCTGGGC 512008 ||||| ||||| ||||| | ||||||||||| | | |||| || ||| | || Sbjct 26983 GGCGTCGACGCTTCGCGGACATACACCAACGACCTGTGGCAAGTGGTCGAGGTGTTTGGT 27042 Query 512009 ATCGAGGCCGCCGTGGCCGTGCTCTTTTCC--GAGATCAAGGCCGTCATCTCCTTTGACG 512066 |||||||| ||| | || ||||| || ||| | | ||| | | ||||||| Sbjct 27043 ATCGAGGCAGCCC-GTTCG-GCTCTGGTCAAGGAGTTGACCAACGTGCTGGCGTTTGACG 27100 Query 512067 GCACCTACGTCAACGACCGCCACTTTGCGCTGGCCACCGACACCATGTGCTGCCGCGGAT 512126 | ||||||||||| | || ||| |||||||| || || |||| | | | |||| Sbjct 27101 GTTCCTACGTCAACCATCGTCACATTGCGCTGCTGACAGATGTCATGACGTACAGAGGAT 27160 Query 512127 CGGTGGTGGCCGTCACGCGCCACGGCTTCAACCGCGCCGACCACGGCTTC-CTGTCGCGG 512185 | | ||| || || || ||||| ||||||| || || ||| | | | ||| ||| Sbjct 27161 CCATCTCGGCTGTGACCCGACACGGTATCAACCGTGCTGA-CACTGGTGCTCTGATGCGT 27219 Query 512186 GCCTCTTTCGAAGAGACCGTCGACATCCTCTTTGACGCGGCGGCCTTTGCCGAGACCGAC 512245 |||||||| ||||| ||||| ||| | | || || || || | || | || | | Sbjct 27220 TGTTCTTTCGAGGAGACGGTCGAGATCTTGCTCGAGGCTGCCGCGTCTG--GTGAGCTAG 27277 Query 512246 AAGATCACCGACG--GCTCGGTGACCGAGCCCATCATCCTGGGCCAGACGGCGCCCATCG 512303 | || |||| | ||||| || || |||| |||||||||| |||||| || | Sbjct 27278 ATGACTGCCGAGGTATCTCGGAGAACG------TCATGCTGGGCCAGATGGCGCCAATGG 27331 Query 512304 GCACGGCCATCTCGGACGTGCTCGTG 512329 |||||| | || || |||||| || Sbjct 27332 GCACGGGTAACTTTGATGTGCTCCTG 27357 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6105820256414824