Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20phaseoli_20[genbank_20GCA_5F001680515.1_202016-07-06] 16,072 sequences; 50,534,409 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq1855 188 1e-41 seq626 141 1e-27 seq1349 125 1e-22 seq1450 116 6e-20 seq2916 113 7e-19 seq243 91.5 2e-12 >seq1855 Length=7932 Score = 188 bits (208), Expect = 1e-41 Identities = 243/331 (73%), Gaps = 11/331 (3%) Strand=Plus/Plus Query 794340 ACCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTT 794399 ||| ||||| ||| ||| | |||||| |||| ||||| ||||||||||| ||||| Sbjct 1545 ACCCTCGTCACGAGAGATGAGCTCGTTGGAAAAGGTCAGGCCAGGCATGAGGCCACGCTT 1604 Query 794400 CTTGAGCCAAAAGATGG---CACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGC 794456 ||||||||| ||||||| || || || || ||| ||||| ||||||||||| || Sbjct 1605 CTTGAGCCAGAAGATGGAGGCAAAGGCACCGCT---GAAGAAGATACCCTCGACGGCAGC 1661 Query 794457 AAAGCCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCTTTGTTGATCCACTTCATCGC 794516 |||| ||||||| |||| ||||| | | | || | | |||||| || || Sbjct 1662 AAAGGCGACGAGACGCTGAGCAAAGGA---CGAGTTCTTGTCCTGGATCCATCGGATGGC 1718 Query 794517 CCACTCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGCGCGAAAGAGGT-GGTCCT 794575 ||| || ||||| || | | |||| | || || |||||| ||||||| ||| | Sbjct 1719 CCAGTCGGCCTTCTTGCGGATGCAGGGGATGGTCTCAATGGCGTTGAAGAGGTAGGTTCG 1778 Query 794576 TCTCGACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGT 794635 | | | || ||||||| ||||||||| |||||||||||||||||||| |||||||||| Sbjct 1779 TTGAG-CAGGCTCCTTGATGTAGGTGTCAATGAGGAGCGAGTAGGTCTCGGAGTGGATGT 1837 Query 794636 TTTCGATGGCGATCTGGAAGCCATAAAAGCA 794666 | || || |||||||||||| || ||||| Sbjct 1838 TCTCCATCATGATCTGGAAGCCGTAGAAGCA 1868 Score = 147 bits (162), Expect = 3e-29 Identities = 190/259 (73%), Gaps = 5/259 (2%) Strand=Plus/Plus Query 793892 GACGCCCGCCTTGGCATACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAG 793951 ||| || ||||| || || || || ||| |||||| |||||||||||||| |||| Sbjct 1224 GACACCAGCCTTCTGGTAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCACCGAG 1283 Query 793952 CGAGATCAACTCCATCCACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCGCACCCGA- 794010 ||||| |||||| | ||| ||||||| | | |||| ||||||| |||| Sbjct 1284 GGAGATGTTCTCCATGAAGTCGAAGGGGTTGGTGGCCTTGTAGACCTTCTCGTTGCCGAG 1343 Query 794011 -GCGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTC 794069 |||||| || ||||||||||||||||| || |||||||| ||||||| |||||||| Sbjct 1344 GGCGACG--AGGAGGCGGTCGGCGACGAACTCGATGTACTGCTTCATGAGGTCGGCGTTC 1401 Query 794070 ATGCCGATGAGCGCCACGGGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGCC 794129 ||||||| || || ||| || | |||| | | ||||| | ||| || |||||| Sbjct 1402 ATGCCGAGCAGGGCGCAGGGGAGGGCCTCGGTCAGGAACTCCTGCTCAATGGTGACGGCA 1461 Query 794130 TCGATGATGATCTGCCTGG 794148 ||| ||||||| | ||||| Sbjct 1462 TCGGTGATGATGT-CCTGG 1479 >seq626 Length=19201 Score = 141 bits (156), Expect = 1e-27 Identities = 188/260 (72%), Gaps = 2/260 (1%) Strand=Plus/Plus Query 2019183 AAAAGAA--TCGACCTGCCGCCCGGCCGCCACAAGGTGATCATCCTCGATGAGGCCGACT 2019240 ||||||| || ||||||| |||||||||||||| || |||||||||| || || ||| Sbjct 6212 AAAAGAAGGTCACCCTGCCGGCCGGCCGCCACAAGCTGGTCATCCTCGACGAAGCTGACA 6271 Query 2019241 GCCTTACGTCGGCGGCCCAGCAGGCCCTCCGATCGACCATGGAAAAGTACACCAACACGA 2019300 || | || |||| |||||||| || |||||| |||||||||| ||| ||||||||| Sbjct 6272 GCATGACCTCGGGCGCCCAGCAAGCACTCCGACGAACCATGGAAATCTACTCCAACACGA 6331 Query 2019301 CGCGGTTTGCGCTGGCCTGCAACACGTCGTCGATGGTCATCGAAGCCCTCCAGAGCCGTT 2019360 | | || || | ||||||||| ||| | | ||||||| |||| || || | Sbjct 6332 CCAGATTCGCCTTTGCCTGCAACCAGTCCAACAAGATCATCGAGCCCCTACAATCGCGAT 6391 Query 2019361 GCGCCATCTTGCGCTTTGCGCGCCTCACCGACGCCCAGATCGCCGCGCGTCTGCGCGAGA 2019420 |||||||| || | | || | || || |||||| ||| ||| ||| ||| Sbjct 6392 GCGCCATCCTGAGATACGCCAAGTTGACGGATGCCCAGGTCGTGAAGCGACTGATGCAGA 6451 Query 2019421 TTATCGACGCCGAAAAGGTC 2019440 ||||||| || ||||||||| Sbjct 6452 TTATCGAGGCGGAAAAGGTC 6471 >seq1349 Length=11557 Score = 125 bits (138), Expect = 1e-22 Identities = 93/109 (85%), Gaps = 0/109 (0%) Strand=Plus/Minus Query 2035647 GCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGGTGCAAGACCGTGGCCAAC 2035706 ||| ||||||| ||||||||||||||||| || ||| | || ||||||||||| |||||| Sbjct 8997 GCCTCCAACTATCTCGACATCAAGCCCCTTCTTGATGTCGGCTGCAAGACCGTCGCCAAC 8938 Query 2035707 CTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTTAACATCA 2035755 | |||||||||||||| |||||||| || || ||||| || ||||||| Sbjct 8937 ATGATCAAGGGCAAGTCTCCCGAGGAGATTCGGAAGACTTTCAACATCA 8889 >seq1450 Length=10739 Score = 116 bits (128), Expect = 6e-20 Identities = 355/540 (66%), Gaps = 14/540 (3%) Strand=Plus/Plus Query 2069252 GGTCGACGGTAAACTGGATGGCGTTGGCGGCAGGCCGGGTGCGCAGATAGTACATGCCGG 2069311 |||||||||| ||| |||||| ||||||| | | || ||||| ||||||||||| | Sbjct 11 GGTCGACGGTGAACGGGATGGGAGCAGCGGCAGCCTGCGTTCGCAGGTAGTACATGCCCG 70 Query 2069312 TCTTGAGGCCGCGACGCCACGCGTAGGCGTGCATCGACGTGATGGACTCGGCATTCGGGA 2069371 |||| |||||| | ||| || |||||| ||||| || | | | | | Sbjct 71 TCTTCAGGCCGAGCTTCCAGCCGGCAAAGTGCATGCTGGTGAT---CTTGCCCATGGTGG 127 Query 2069372 CGGCA--CA-GTAGAGGTTGAGCGACTGGCTCTGGTCGACATAGGGCGCGCGGTCGGCCG 2069428 | | || || || |||||| |||||| ||| || | ||| | |||||||| | Sbjct 128 GGTCCTTCATGTGGATGTTGAGGGACTGGGACTGATCAATGAAGGCACCTCGGTCGGCAG 187 Query 2069429 CCATGTCGATGGTCACGCGGTTGGACACCTCCCACACGGTCTTGAACAGGGCCTTGAGAT 2069488 |||| | | | | ||| | || | |||||| ||||||||| | |||||||||| | Sbjct 188 CCATCTGAACGACCTGGCGCTGCGAAATCTCCCAGACGGTCTTGTAGAGGGCCTTGACCT 247 Query 2069489 GCGGCGGCACCTCGTCGTCATCAAAGCCCTGCACCGAGCCCTGCGCTGCGATGAGGCGGT 2069548 |||||| | | | || | ||| | || || | | | || |||| |||| Sbjct 248 -CGGCGGGGA-TGTTGGGGAT----GTTCTGGATGGAACCGTTCTCGGCAATGATTCGGT 301 Query 2069549 CGCGAAAGTCGGGCGTCCACAGGCCGCGCGCCATCATGCGC-TCGACCAGGTGGCGGTTG 2069607 | | | || ||||||||| | | || || | | | || ||| | ||||| Sbjct 302 TTTTCATGGCATCCGACCACAGGCC-CATGTCAACAAGGTCCTTGAGCAGCCAGGGGTTG 360 Query 2069608 ACCACGGTAAAGTCGCCCGAGAGCACGCGGCGCGTGTAGATGTTGCTCGTGATGACCTCG 2069667 || || || ||||| | ||| || |||||| |||||||||| ||| |||| Sbjct 361 ACGACCTGGAACTCGCCAGCGAGGACACGGCGCTGGTAGATGTTGGAGGTGTAAGGCTCG 420 Query 2069668 CACGCCTCGGTGTTGCCCAGGATCTGCGACGTCGTGGCCGTGGGCATGAGCGCCACGAGC 2069727 | |||| ||||||||||||||||||| || |||| || ||||| | || | ||| Sbjct 421 AAGCACTCGTTGTTGCCCAGGATCTGCGAAGTACTGGCAGTAGGCATAGGGGCAAGCAGC 480 Query 2069728 AGCGAGTTGCGCAGGCCGTACTGTCGCACCAGCGCCCGCAGGGCGTCCCAGTCCCAGCGG 2069787 || |||||| | ||||| || ||| || |||| ||| |||||||||||| || Sbjct 481 AGACTGTTGCGAATGCCGTGCTCCTTGACCTGCTCCCGGAGGTTCTCCCAGTCCCAGAGG 540 Score = 100 bits (110), Expect = 5e-15 Identities = 177/258 (69%), Gaps = 0/258 (0%) Strand=Plus/Plus Query 2073540 CTGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTTGGA 2073599 ||||||||| || || || |||| ||| ||||| || |||||||| | |||||||| Sbjct 1410 CTGGTCGACGTACCGGGCAGTGTTGTTGAAGACACGAAGCATGGGGGTGACACCGTTGGA 1469 Query 2073600 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAAGCC 2073659 |||||||| || || | ||| | ||| | ||| || | ||| || | ||| Sbjct 1470 GGTACCGTTGGTACCAGCGATGTAAGAGCCAGTGGCACGGATTCGGTGGACGTTCAGGCC 1529 Query 2073660 GATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCCCTC 2073719 ||| || || ||| ||||||||| | || || | || || || || || || ||||| Sbjct 1530 GATACCACCCGCCATCTTGGAGATCATGGCACAGGTCTTGAGAGTATCATAAATACCCTC 1589 Query 2073720 GATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACGAGTTTTGCGGGCGCGCCGTGCC 2073779 || ||| | |||||||| | ||| ||||| || || || || | | || || Sbjct 1590 AATGCTGTCCTCTTTCATGTCGACCAGGAAGCATGAGGACAGCTGAGGCTGGGGAGTACC 1649 Query 2073780 GGCATTGAAGAGCGTGGG 2073797 ||||||||||| ||||| Sbjct 1650 AGCATTGAAGAGGGTGGG 1667 Score = 96.9 bits (106), Expect = 5e-14 Identities = 281/433 (65%), Gaps = 8/433 (2%) Strand=Plus/Plus Query 2071584 CTCGGTGCACAGGTTGGCCGACATCG-TGGTGCCCAGGTTCTGCTGGTTGCTGGTCAGGT 2071642 ||||||||| || |||| | | | ||||||||||||||| ||||||||| | ||| Sbjct 981 CTCGGTGCAGAGATTGGA-GCTACGGATGGTGCCCAGGTTCTTCTGGTTGCTCTTGCGGT 1039 Query 2071643 TGACGGCGTCCTTGTGCAGCATGTAGGGCGCACCCGTCTCGATCTGCGCCGTGACGATGG 2071702 || | |||||||| |||||| |||| || |||||| |||||||| || ||||| Sbjct 1040 TGCAGTGGTCCTTGTAGAGCATGAAGGGGTTGCCGGTCTCGGTCTGCGCCTCGAGGATGG 1099 Query 2071703 CCGACCAAATTTGGCGCGCGGGCACCGAGGTCCT-CGCGCG--GCCCTNNNNNNNNNNNN 2071759 | |||| | | | || || |||| | || | |||| Sbjct 1100 CATACCAGAGCTTCTGGGCCTTCAT---GGTCTTGCGACCCTTGCCCGCCTTCTCATACT 1156 Query 2071760 NNNNNNAGAGGGCGTCAAAGGCGGCGCCGTGGCACTCGTGCAGGCCGGGCGCCTCGGACG 2071819 | || || || || | |||| | ||| ||| ||| ||||| |||| | Sbjct 1157 TTTCGTAAAGAGCCTCGAACTCCTCGCCATAGCAGTCGGCCAGACCGGGGCACTCGTTGG 1216 Query 2071820 GGCAAAAGAGCGACCAGTCGCCGCCAGTCACCACGCGGCGCATAAACAGGTCGCACGTCC 2071879 | || | ||| | |||||| ||| || | || || ||| || || ||| ||| Sbjct 1217 GACACATGAGGGTCCAGTCACCGTTCTTCTCGACACGCTTCATGAAGAGATCGGGAATCC 1276 Query 2071880 ACAGGCCGTAAAAGAGATCGCGCGCCCGGTTCTCCTCCTTGCCGTGGTTCTTTTTCAGGT 2071939 | || | || || ||||| || ||| ||||||||||||||||||||| ||||| Sbjct 1277 AGAGAGCCAGGAACAGGTCGCGGGCGCGGACCTCCTCCTTGCCGTGGTTCTTGCGCAGGT 1336 Query 2071940 CGAGCCAGTCGACGAGGTCGGCGTGCCACGGCTCCAGGTAGCAGGCAAAGGCGCCCTTGC 2071999 | || | || | || || |||||||| ||||| |||||| ||||||||| || | Sbjct 1337 CAAGGAACTCAAAGACATCTGCGTGCCAGGGCTCAAGGTAGATGGCAAAGGCACCAGGTC 1396 Query 2072000 GCTTGCCGCCGCC 2072012 ||||| ||| || Sbjct 1397 GCTTGTTGCCACC 1409 >seq2916 Length=4309 Score = 113 bits (124), Expect = 7e-19 Identities = 80/92 (87%), Gaps = 0/92 (0%) Strand=Plus/Minus Query 1485471 GTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCAT 1485530 ||||||||||||||||||||||||||| |||||||||||| |||| || || ||| | | Sbjct 909 GTACTTGGTGACGGCCTTGGTACCCTCAGAGACGGCGTGCTTGGCAAGCTCACCGGGGAG 850 Query 1485531 GATCAGGCGCACGGCGGTCTGGATCTCGCGGG 1485562 ||||||||| || | |||||||||||| |||| Sbjct 849 GATCAGGCGGACAGAGGTCTGGATCTCTCGGG 818 >seq243 Length=28623 Score = 91.5 bits (100), Expect = 2e-12 Identities = 83/105 (79%), Gaps = 0/105 (0%) Strand=Plus/Plus Query 429633 ACCTTCCGGCTCAACCTGGCCGTGACGGGCACCTACAACGCCGACTTTGACGGCGACGAG 429692 |||||||| || |||||| |||| || ||||||||||||| || || || |||||| Sbjct 24400 ACCTTCCGTCTGAACCTGTCCGTCACATCTCCCTACAACGCCGATTTCGATGGTGACGAG 24459 Query 429693 ATGAACCTGCACGTGCCCCAGTCGGAGATGGCACGCGCCGAAGTC 429737 |||||||||||||| |||||| ||| | | ||||| |||||| Sbjct 24460 ATGAACCTGCACGTTCCCCAGAGCGAGGAGACTCGCGCTGAAGTC 24504 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7914536748055608