Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20phaseoli_20[genbank_20GCA_5F001680515.1_202016-07-06] 16,072 sequences; 50,534,409 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq1855 226 4e-53 seq1450 120 4e-21 seq626 95.1 2e-13 >seq1855 Length=7932 Score = 226 bits (250), Expect = 4e-53 Identities = 405/572 (71%), Gaps = 31/572 (5%) Strand=Plus/Minus Query 1455765 GCTACCAGCGGATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAG 1455824 || |||| | ||| ||| | |||||| || |||||||||||||| || ||||| |||||| Sbjct 2091 GCAACCA-CAGATCTGGCAGATGTAC-AAGAAGGCCGAGGCCTCTTTCTGGACTGCCGAG 2034 Query 1455825 GAGGTCGACCTCGGCGCCGA----CACGGTCCACTGGGTGT--CGC-TGAGCGACGACGA 1455877 ||| | || || | || |||| ||||| ||| ||| | |||||| Sbjct 2033 GAGATTGATCTATCCAAGGATCTCCACG----ACTGGAACAACCGCCTGACTGCCGACGA 1978 Query 1455878 GCGCCATTTCATCAAGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCG 1455937 || ||| || ||| |||||||||| || ||| ||| || |||||||| || Sbjct 1977 GCAGTTCTTCGTCTCCCACATCCTCGCCTTCTT-CGCTGCCTCTGACGGCATCGTCAACG 1919 Query 1455938 AGAACCTGGCCGGCCGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACG 1455997 ||||||| | || || || | |||||||| | || ||||| || | || |||| Sbjct 1918 AGAACCTTGTCGAGCGATTCAGCGGCGAGGTCCAGATCCCCGAGGCCCGATGCTTCTACG 1859 Query 1455998 GGTTCCAGATCGCCATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCT 1456057 | ||||||||| || || ||||||||||| || |||||||||||||| || ||||||| Sbjct 1858 GCTTCCAGATCATGATGGAGAACATCCACTCCGAGACCTACTCGCTCCTCATTGACACCT 1799 Query 1456058 ACGTCAAGGACCCGGTCGAGAAGGACC-ACCTCTTTCGCGCCATCGACACGGTGCCGTCG 1456116 || ||||||| || | | | | ||| ||||||| |||||| || || | || | Sbjct 1798 ACATCAAGGAGCCTG-CTCAACGAACCTACCTCTTCAACGCCATTGAGACCATCCCCTGC 1740 Query 1456117 GTGAGGAAAAAGGCCGACTGGGCGATGAAGTGGATC---AACAAGGAGGGCCTCGACACT 1456173 | | || |||||||||||||| || |||||| ||||| | |||| | || Sbjct 1739 ATCCGCAAGAAGGCCGACTGGGCCATCCGATGGATCCAGGACAAGAA----CTCGTC-CT 1685 Query 1456174 TTGCCGAGCGGCTCGTCGGCTTTGCCG-CGTCGAGGGCATCTTTTTC-TCGG-GCAGTTT 1456230 |||| |||| ||||||| |||||| | ||||||||| ||||| ||| ||| || || Sbjct 1684 TTGCTCAGCGTCTCGTCGCCTTTGCTGCCGTCGAGGGTATCTTCTTCAGCGGTGCCTTTG 1625 Query 1456231 CTGCGCCATCTTTTGGCTCAAGAAGCGCGGCCTCATGCCCGGTCTTCTGCTTTAGCAACG 1456290 | | ||||||| |||||||||||||| ||||||||||| || | | |||| ||||| Sbjct 1624 C--CTCCATCTTCTGGCTCAAGAAGCGTGGCCTCATGCCTGG-CCTGACCTTTTCCAACG 1568 Query 1456291 AATTTATCAGTCGCGACGA-AGTTTTCACCCC 1456321 | | ||| ||| ||||| || ||||| || Sbjct 1567 AGCTCATCTCTCGTGACGAGGGTCTTCACACC 1536 Score = 116 bits (128), Expect = 5e-20 Identities = 180/252 (71%), Gaps = 4/252 (2%) Strand=Plus/Minus Query 1456523 ATCATCGTCGAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGCGAGTCGCTGCCGGTGGCG 1456582 |||||| ||| |||||| || ||| | ||||| | | |||| | || || || Sbjct 1472 ATCATCACCGATGCCGTCACCATTGAGCAGGAGTTCCTGACCGAGGCCCTCCCCTGCGCC 1413 Query 1456583 CTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTGTCGCCGACCGCC 1456642 || |||||||||||||| | |||||| |||||||| || || ||||||||||||| Sbjct 1412 CTGCTCGGCATGAACGCCGAC-CTCATGAAGCAGTACATCGAGTTC-GTCGCCGACCGCC 1355 Query 1456643 TGCTCGCGGCGCTCGGCTGCGGAGAAGCACTACCGGACGGCCAACCCGTTCCCATGGATG 1456702 | |||| || |||||| || ||||| |||| | | ||||||| ||| | ||| Sbjct 1354 TCCTCGTCGCCCTCGGCAACG-AGAAGGTCTACAAGGCCACCAACCCCTTCGACTTCATG 1296 Query 1456703 GAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGCCGCGT-GGCGAGTACGCC 1456761 ||| ||||| |||| |||||||||||||| |||||| || || || || ||| Sbjct 1295 GAGAACATCTCCCTCGGTGGCAAGACCAACTTCTTCGAGAAGCGTGTCGGTGACTACCAG 1236 Query 1456762 AAGGCCGGCGTC 1456773 ||||| || ||| Sbjct 1235 AAGGCTGGTGTC 1224 >seq1450 Length=10739 Score = 120 bits (132), Expect = 4e-21 Identities = 335/506 (66%), Gaps = 25/506 (5%) Strand=Plus/Minus Query 259682 CACAAGGAGGTCCTCGACGCTGCCATCTGCCACGGCCGAGACTTTGGCTACTCGTACTTT 259741 |||||||||| || ||| | ||||| | | | ||| ||||| ||| ||||||| Sbjct 1895 CACAAGGAGGAGCTAGACTCGGCCATTGTCTATGACCGTGACTTCCAATACCAGTACTTT 1836 Query 259742 GGTCTGGCGAC-CTTGCGCCGGTCCTACCTGACCAA-AGTGC--GCGATATTGTCGTCGA 259797 || | ||| |||| || | |||||||| ||| | || || | ||||| | | Sbjct 1835 GGCTTCAAGACTCTTGAGC-GATCCTACCTCCTCAAGATTGATGGCAAGATTGTTG---A 1780 Query 259798 GCGGCCCCAGTATATGCTCATGCGTGTCGCCCTTGGCCATTATGGGTTTGCCGACGTCGA 259857 ||| |||||| | ||| |||||||||| | | ||| | |||| | || Sbjct 1779 GCGTCCCCAGCACATGATCATGCGTGTGTCTGTCGGCA--TCTGGGGT----------GA 1732 Query 259858 CAATGCGCTGGAGCACGTGCTCGCCACCTACGAGGCCATGTCGCAGCAG-TTGTTCACCT 259916 | || | |||| || || | |||||| | |||||| |||| || |||||| Sbjct 1731 CGATA---TTGAGCGTGTCCTGGAGACCTACAACCTGATGTCG-AGCAAATTCTTCACCC 1676 Query 259917 CAGCGACGCCCACGCTCTTTAATGCCGGCACGCCGCGCCCGCAGAATTCGTCGTGCTTTC 259976 || | ||||| ||||| ||||| || || || | || ||| || || ||||| | Sbjct 1675 ATGCCTCCCCCACCCTCTTCAATGCTGGTACTCCCCAGCCTCAGCTGTCCTCATGCTTCC 1616 Query 259977 TGTTGGACATGAAGGCCGATTCGATCGAGGGCATCTATGACACGCTCAAGCAGTGCGCGC 260036 || | |||||||| | || || ||||| || ||||| || |||||| || || Sbjct 1615 TGGTCGACATGAAAGAGGACAGCATTGAGGGTATTTATGATACTCTCAAGACCTGTGCCA 1556 Query 260037 TCATCTCCAAGGCGGCCGGCGGCATCGGTTTTGCCGCACACAAGGTGCGCGCCGCGGGCG 260096 | ||||||||| ||| || || ||||| | || ||| | || ||| | ||| Sbjct 1555 TGATCTCCAAGATGGCGGGTGGTATCGGCCTGAACGTCCACCGAATCCGTGCCACTGGCT 1496 Query 260097 CCTACGTGGCGGGCACCAACGGCCAGTCCAACGGCCTTGTGCCCATGCTTCGCGTTTTTA 260156 | ||| | || || |||||||| |||||||| | ||||||||||| || || | Sbjct 1495 CTTACATCGCTGGTACCAACGGTACCTCCAACGGTGTCACCCCCATGCTTCGTGTCTTCA 1436 Query 260157 ACGACACGGCGCGCTACGTCGACCAG 260182 || |||| || || |||||||||||| Sbjct 1435 ACAACACTGCCCGGTACGTCGACCAG 1410 Score = 96.9 bits (106), Expect = 5e-14 Identities = 108/142 (76%), Gaps = 2/142 (1%) Strand=Plus/Minus Query 262092 AGATCTGGTCGGCCATTGTCGCGGCCCATATCGAGACCGGCACGCCCTACATGGTCTACA 262151 || |||||| ||||| ||| ||| || | ||||||||||| |||| |||| |||||| Sbjct 1111 AGCTCTGGTATGCCATCCTCGAGGCGCAGACCGAGACCGGCAACCCCTTCATGCTCTACA 1052 Query 262152 AGGACGCCGTCAACCTGACCAGCAACCAGCAGAACCTGGGCACCA-CGACAGAGGCCAAC 262210 ||||| | ||||| | ||||||||| ||||||||||||||| | || |||| Sbjct 1051 AGGACCACTGCAACCGCAAGAGCAACCAGAAGAACCTGGGCACCATCCGTAG-CTCCAAT 993 Query 262211 CTGTGCACCGAGATCGTCCAGT 262232 || ||||||||||| || ||| Sbjct 992 CTCTGCACCGAGATTATCGAGT 971 >seq626 Length=19201 Score = 95.1 bits (104), Expect = 2e-13 Identities = 127/177 (72%), Gaps = 0/177 (0%) Strand=Plus/Minus Query 332878 CAGGATGGCACAACGGCTCTGCAGGGCCTCGATGACCATTGACGACGTGTTGCAGGCCAG 332937 ||||||||| || || || |||| |||||||| | | ||| ||||||||| | Sbjct 6402 CAGGATGGCGCATCGCGATTGTAGGGGCTCGATGATCTTGTTGGACTGGTTGCAGGCAAA 6343 Query 332938 GGCAAACCGCGTCGTATTGGTATGCTTTTCCATGGTCGACCGGAGGGCCTGTTGGGCCGC 332997 ||| || | ||||| |||| | |||||||||| ||||| || || ||||| | Sbjct 6342 GGCGAATCTGGTCGTGTTGGAGTAGATTTCCATGGTTCGTCGGAGTGCTTGCTGGGCGCC 6283 Query 332998 CGGCGTGAGGCAGTCGGCCTCGTCGAGGATGATGATCTTGTGGCGCCCGTGCGGCAG 333054 || || | || ||| || ||||||||||||| | ||||||||| ||| |||||| Sbjct 6282 CGAGGTCATGCTGTCAGCTTCGTCGAGGATGACCAGCTTGTGGCGGCCGGCCGGCAG 6226 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7176261026059664