Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20phaseoli_20[genbank_20GCA_5F001680515.1_202016-07-06] 16,072 sequences; 50,534,409 total letters Query= NC_028461.1 Length=127011 Score E Sequences producing significant alignments: (Bits) Value seq467 113 4e-20 >seq467 Length=22328 Score = 113 bits (124), Expect = 4e-20 Identities = 201/289 (70%), Gaps = 7/289 (2%) Strand=Plus/Minus Query 29759 TGAGGGTCGTAACCCTCCAGGGAGAAATCCTCTGCCTTAAAGTCGTCCAGGCTCTCCACC 29818 |||||||| || |||| | |||||||| ||||| | |||| | ||| ||| || Sbjct 8747 TGAGGGTCATAGCCCTTGATAACAAAATCCTCCGCCTTCCACCCGTCGATGCT-TCCGCC 8689 Query 29819 CTCCTGT----TTATCCTCAGTGTGGGAAAGGGTCTGGGCTCCCTCTCGAGCTGAGTCTT 29874 || || | | ||| ||| |||||| | |||||| | ||| ||||| || || Sbjct 8688 CTTCTCTCGAGTAATCTCCAGCTCTGGAAAGTCACGGGGCTCGCGCTCAAGCTGCGTGTT 8629 Query 29875 CAGCGGTTCCACGTTATCCAGGTAGACGTGAGCGTCTCCCAGGTTGTGGACAAACTCTCC 29934 || | ||||||| || ||||||||||| || || |||| | ||| | | || | Sbjct 8628 GAGAGCATCCACGTGGTCGAGGTAGACGTGCGCATCGCCCATGACGTG-AGTGAGGCTGC 8570 Query 29935 C-GGTTCTAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGT 29993 | || | | || |||||| |||||||||| || || || | ||||||||| |||| Sbjct 8569 CAGGCACCAATTCGCAGACGTGCGCCATCATGTGTGTCAGCAGTGCGTAGCTGGCAATGT 8510 Query 29994 TAAAGGGTACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACA 30042 | || || || ||||| |||||||| | || | |||||||||||| || Sbjct 8509 TGAACGGGACGCCGAGACCCATGTCGCAGGATCGCTGGTAGAGCTGGCA 8461 Score = 91.5 bits (100), Expect = 1e-13 Identities = 187/272 (69%), Gaps = 6/272 (2%) Strand=Plus/Minus Query 30188 AGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGTGTACTCTGCTCCGAAA 30247 ||||| || || ||| | |||| |||||| | | | || |||||| || || || Sbjct 8276 AGCTGGTCGACGCCCTTGCCCGTGTAGTCCGTCTTGGCATCAACGTACTCGGCGCCAAAG 8217 Query 30248 TGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAGCCC 30307 || | ||| ||||| |||||||| || || || || || | || | ||| | || ||| Sbjct 8216 TGTCGCCATTGGAAGCCGTACACGGGGCCGAGATCGCCGACCTCGCGGTGGTTGAGGCCG 8157 Query 30308 CTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTT--TACCCCCTTCTCAG 30365 ||||| | || || | ||| || ||| ||||||||||||| | || | || | | Sbjct 8156 AGGTTGTCGAGGAACTCGCGGGAGCCATTGCCGTCCCAGATCTTGATGCCGGCCTCGCTG 8097 Query 30366 AGAGCTCTTTGGAGTTTGTG-GACCCTCTGACGAACCACAGCAGCTCCTCCACGACGGCC 30424 || ||| ||||| |||| ||||| || |||||| || ||||| | | |||||| Sbjct 8096 AG-GCT-GGTGGAGGATGTGTTGCCCTC-GATGAACCAGAGGAGCTCGGCGATGACGGCG 8040 Query 30425 TTCCAAAAGACCCTCTTGGTCGTGAGGAGGGG 30456 ||||| | |||||| ||||||||||| Sbjct 8039 CGGGTGAAGACGCGCTTGGTGGTGAGGAGGGG 8008 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406230812934624