Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20pininemorale_20[genbank_20GCA_5F002165215.1_202017-06-02]
153 sequences; 47,778,485 total letters
Query= NC_000852.5
Length=330611
Score E
Sequences producing significant alignments: (Bits) Value
seq7 140 7e-28
>seq7
Length=1585612
Score = 140 bits (154), Expect = 7e-28
Identities = 316/468 (68%), Gaps = 8/468 (2%)
Strand=Plus/Plus
Query 230170 TCGTTTGCCGAGCGTCTCGTCGCCTGGGTGTGTGTTGAAGGTATTCTGTTTTCCGGGAGT 230229
|| |||||| |||||||||| |||| | |||||| ||||| || | ||| | | ||
Sbjct 1400986 TCCTTTGCCCAGCGTCTCGTTGCCTTTGCTGCTGTTGAGGGTAT-CT-TCTTCAGTG-GT 1401042
Query 230230 TTCTGCGCC---ATCTTTTGGCTGCGGAACAAAGGTGTGATGCCTGGCCTCGGTCTGTCT 230286
|| |||| ||||| ||||| ||| ||| | |||||||| || | | ||
Sbjct 1401043 GCCTTCGCCTCTATCTTCTGGCTCAAGAAGCGTGGTCTCATGCCTGGTCTGACTTTCTCC 1401102
Query 230287 AACGAGTTCATCAGTCGCGACGAGGGTCTCCATCAACAGTTCGGCGAGCTTATGTATTCA 230346
|||||| ||||| ||| ||||||||||| || | || | || | | ||
Sbjct 1401103 AACGAGCTCATCTCTCGTGACGAGGGTCTTCACACTGACTTTGCATGCCTCCTCCACTCT 1401162
Query 230347 AAGCTCCAGAA-CAAGCTACCATTCGAGACGGTCAAACAAATCATTACAGAAGCAGTTGA 230405
| ||| || | || | | | ||| | || | | ||||| || || || ||
Sbjct 1401163 CACCTCAAGGGTCGTGCCAGTAAGC-AGATGATCCAGGATATCATCACTGATGCCGTCAC 1401221
Query 230406 AAACGAAAAGGAGTTCATTTGTGACGCTATTCCATGTCGCCTTATTGGCATGAACGCTGA 230465
| || |||||||| | || ||| |||| ||| ||| | ||||||||| ||||
Sbjct 1401222 CATTGAGCAGGAGTTCCTCACCGAAGCTCTTCCCTGTGCCCTCCTCGGCATGAACTCTGA 1401281
Query 230466 ACTTATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTTGTTGCACTTGGTTACGA 230525
|| ||| |||||||| || ||||| || || || | |||| || ||||| ||||
Sbjct 1401282 CCTCATGAAGCAGTACATTGAGTTCGTCGCTGATCGTCTCCTTGTCGCTCTTGGCAACGA 1401341
Query 230526 GAAAGTGTACAACTCTAAGAACCCCTTTGCATTTATGGAGCTCATTTCGCTTCAAGGGAA 230585
||| || ||||| | | |||||||| | ||||||||| ||| || ||| || ||
Sbjct 1401342 GAAGGTCTACAAGGCCACCAACCCCTTCGACTTTATGGAGAACATCTCCCTTGGTGGCAA 1401401
Query 230586 GACCAACTTCTTCGAAAAGCGTGTCAGTGACTATCAGAGGCCTGGTGT 230633
||||||||||||||| |||||||| ||||| |||| | |||||||
Sbjct 1401402 GACCAACTTCTTCGAGAAGCGTGTTGCCGACTACCAGAAGGCTGGTGT 1401449
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1057821926334390
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |