Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20pininemorale_20[genbank_20GCA_5F002165215.1_202017-06-02] 153 sequences; 47,778,485 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq7 140 7e-28 >seq7 Length=1585612 Score = 140 bits (154), Expect = 7e-28 Identities = 316/468 (68%), Gaps = 8/468 (2%) Strand=Plus/Plus Query 230170 TCGTTTGCCGAGCGTCTCGTCGCCTGGGTGTGTGTTGAAGGTATTCTGTTTTCCGGGAGT 230229 || |||||| |||||||||| |||| | |||||| ||||| || | ||| | | || Sbjct 1400986 TCCTTTGCCCAGCGTCTCGTTGCCTTTGCTGCTGTTGAGGGTAT-CT-TCTTCAGTG-GT 1401042 Query 230230 TTCTGCGCC---ATCTTTTGGCTGCGGAACAAAGGTGTGATGCCTGGCCTCGGTCTGTCT 230286 || |||| ||||| ||||| ||| ||| | |||||||| || | | || Sbjct 1401043 GCCTTCGCCTCTATCTTCTGGCTCAAGAAGCGTGGTCTCATGCCTGGTCTGACTTTCTCC 1401102 Query 230287 AACGAGTTCATCAGTCGCGACGAGGGTCTCCATCAACAGTTCGGCGAGCTTATGTATTCA 230346 |||||| ||||| ||| ||||||||||| || | || | || | | || Sbjct 1401103 AACGAGCTCATCTCTCGTGACGAGGGTCTTCACACTGACTTTGCATGCCTCCTCCACTCT 1401162 Query 230347 AAGCTCCAGAA-CAAGCTACCATTCGAGACGGTCAAACAAATCATTACAGAAGCAGTTGA 230405 | ||| || | || | | | ||| | || | | ||||| || || || || Sbjct 1401163 CACCTCAAGGGTCGTGCCAGTAAGC-AGATGATCCAGGATATCATCACTGATGCCGTCAC 1401221 Query 230406 AAACGAAAAGGAGTTCATTTGTGACGCTATTCCATGTCGCCTTATTGGCATGAACGCTGA 230465 | || |||||||| | || ||| |||| ||| ||| | ||||||||| |||| Sbjct 1401222 CATTGAGCAGGAGTTCCTCACCGAAGCTCTTCCCTGTGCCCTCCTCGGCATGAACTCTGA 1401281 Query 230466 ACTTATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTTGTTGCACTTGGTTACGA 230525 || ||| |||||||| || ||||| || || || | |||| || ||||| |||| Sbjct 1401282 CCTCATGAAGCAGTACATTGAGTTCGTCGCTGATCGTCTCCTTGTCGCTCTTGGCAACGA 1401341 Query 230526 GAAAGTGTACAACTCTAAGAACCCCTTTGCATTTATGGAGCTCATTTCGCTTCAAGGGAA 230585 ||| || ||||| | | |||||||| | ||||||||| ||| || ||| || || Sbjct 1401342 GAAGGTCTACAAGGCCACCAACCCCTTCGACTTTATGGAGAACATCTCCCTTGGTGGCAA 1401401 Query 230586 GACCAACTTCTTCGAAAAGCGTGTCAGTGACTATCAGAGGCCTGGTGT 230633 ||||||||||||||| |||||||| ||||| |||| | ||||||| Sbjct 1401402 GACCAACTTCTTCGAGAAGCGTGTTGCCGACTACCAGAAGGCTGGTGT 1401449 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057821926334390