Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20pininemorale_20[genbank_20GCA_5F002165215.1_202017-06-02]
153 sequences; 47,778,485 total letters
Query= NC_003225.3
Length=309286
Score E
Sequences producing significant alignments: (Bits) Value
seq7 150 4e-31
seq5 100 6e-16
>seq7
Length=1585612
Score = 150 bits (166), Expect = 4e-31
Identities = 300/443 (68%), Gaps = 15/443 (3%)
Strand=Plus/Plus
Query 101918 GTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCTGG 101977
|||||||||||||| ||||| || |||||||| |||||||| ||||| || || ||||||
Sbjct 1401004 GTTGCCTTTGCTGCTGTTGAGGGTATCTTCTTCAGTGGTGCCTTCGCCTCTATCTTCTGG 1401063
Query 101978 ATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGGAC 102037
||||||| | ||| | |||||||||| || | |||||| ||| |||| ||| | |||
Sbjct 1401064 CTCAAGAAGCGTGGTCTCATGCCTGGTCTGACTTTCTCCAACGAGCTCATCTCTCGTGAC 1401123
Query 102038 GAAGGTCTTCATCGCGACTTTGCATGCATGCT----GTTGA--AAAAGGGTTTTGTTGAT 102091
|| |||||||| |||||||||||| | || | | |||||| ||
Sbjct 1401124 GAGGGTCTTCACACTGACTTTGCATGCCTCCTCCACTCTCACCTCAAGGGTCGTG----- 1401178
Query 102092 ACCCCATCAAGAGAAAGGATTCTTGAAATTGTCACTGAAGCCGTCCGAATTGAACAAGAA 102151
||| ||| | | ||| | || || ||||||| |||||| ||||| || ||
Sbjct 1401179 ---CCAGTAAG-CAGATGATCCAGGATATCATCACTGATGCCGTCACCATTGAGCAGGAG 1401234
Query 102152 TTTCTCACAGTTTCCCTGCCTGTTAAATTAGTGGGAATGAACTGCAAGTTGATGAGCCAG 102211
|| ||||| | | || || | | | || ||||||| | | |||| |||
Sbjct 1401235 TTCCTCACCGAAGCTCTTCCCTGTGCCCTCCTCGGCATGAACTCTGACCTCATGAAGCAG 1401294
Query 102212 TACATTGAATTTGTGGCAGATAAACTATTGGTTGAAATGGGACTAGAAAAGCACTATAAT 102271
|||||||| || || || ||| || | || | | || || ||| ||| ||
Sbjct 1401295 TACATTGAGTTCGTCGCTGATCGTCTCCTTGTCGCTCTTGGCAACGAGAAGGTCTACAAG 1401354
Query 102272 GTTACCAACCCCTTCCCATTCATGGACAATATTTCCCTCGAGAATAAGACCAACTTTTTT 102331
| |||||||||||| || ||||| || || ||||| | ||||||||||| ||
Sbjct 1401355 GCCACCAACCCCTTCGACTTTATGGAGAACATCTCCCTTGGTGGCAAGACCAACTTCTTC 1401414
Query 102332 GAAAAGAGAGTCGCCGAGTATCA 102354
|| ||| | || ||||| || ||
Sbjct 1401415 GAGAAGCGTGTTGCCGACTACCA 1401437
>seq5
Length=2590615
Score = 100 bits (110), Expect = 6e-16
Identities = 177/253 (70%), Gaps = 4/253 (2%)
Strand=Plus/Plus
Query 94792 CCTCCAGCAGTCTTGGAGATGATTGCCGCCTCCTTAAGAGTATCATAAATACCCTCAATG 94851
|| ||||| |||||||||| || || ||| |||||||| || || ||||||||
Sbjct 1619205 CCACCAGCCATCTTGGAGATCATGGCACAGGTCTTGAGAGTATCGTAGATTCCCTCAATA 1619264
Query 94852 CTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTTGGGGTGTGACTGTT-CCACA 94910
|| || || | | | | | |||||| || || | |||||| ||| | | ||
Sbjct 1619265 CTGTCGTCCTTCATATCAACCAAGAAGCAAGATGACAATTGGGGC-TGAGGGGTGCCGGC 1619323
Query 94911 ATTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTCGACATGAGATCATATGTTTC 94970
||| || || |||||||||||||| || || | | || ||||| |||| ||||| ||
Sbjct 1619324 ATTGAAGAGCGTGGGGGAAGCATGCGTGAAGAACTTGCTAGACATCAGATTGTATGTCTC 1619383
Query 94971 AATGACAGATTTGATGTC-TGATCCGTGAATGCCGACAGCCACACGCATAATCATGTCCT 95029
| ||| | ||| || | | || || | || |||| ||||||||| ||||||| ||
Sbjct 1619384 CAAGACTCGCTCGATATCATCACCCCAGA-TACCAACAGACACACGCATGATCATGTGCT 1619442
Query 95030 GAGGGCGCTCAAC 95042
|||||||||| ||
Sbjct 1619443 GAGGGCGCTCGAC 1619455
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 989582060106115
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |