Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20pininemorale_20[genbank_20GCA_5F002165215.1_202017-06-02]
153 sequences; 47,778,485 total letters
Query= NC_003529.1
Length=155060
Score E
Sequences producing significant alignments: (Bits) Value
seq15 114 1e-20
seq7 104 2e-17
>seq15
Length=769536
Score = 114 bits (126), Expect = 1e-20
Identities = 166/232 (72%), Gaps = 2/232 (1%)
Strand=Plus/Minus
Query 139535 TGGCCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCG 139594
|||||||| || | || | ||| | ||||| || ||||| || || ||||| || |||
Sbjct 351551 TGGCCGCCGCGAAGTCGGAGAACGAGGTGAAGAGTTGACTCCTTCTGGATGTTGTAGTCG 351492
Query 139595 CTCATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGA 139654
|||| |||| ||||| | ||| |||||||| |||| |||||||||||||||||
Sbjct 351491 CTCAAGGTGCGACCATCTTCCAACTGCTTACCAGCGAAGATAAGACGTTGCTGATCGGGG 351432
Query 139655 GGTATGCCTTCTTTGTCGGTGATTTTTTGT-TTTAGCTGTTCCACTGTGTCGGTGGGCTC 139713
|| ||||| || ||||| ||| | || | || | | || | ||||| ||| ||
Sbjct 351431 GGGATGCCCTCCTTGTC-CTGAATCTTGCTCTTCACGTTGTCGATAGTGTCACTGGATTC 351373
Query 139714 CACCTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765
||||||| ||| | ||||| || || | || || ||||| || ||||||
Sbjct 351372 AACCTCAAGGGTGATGGTCTTTCCAGTAAGAGTCTTCACGAAGATCTGCATA 351321
Score = 91.5 bits (100), Expect = 1e-13
Identities = 144/204 (71%), Gaps = 2/204 (1%)
Strand=Plus/Minus
Query 139562 TGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGT 139621
|||| || ||||| || |||||||| ||||| | |||| ||| || |||||
Sbjct 350786 TGAAGAGTGGACTCCTTCTGAATGTTGTAATCAGAGAGAGTGCGGCCGTCCTCAAGCTGC 350727
Query 139622 TTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTT 139681
|| || || | |||| |||||||| ||||| || ||||| || ||||| ||| | ||
Sbjct 350726 TTGCCGGCGAAAATCAAGCGTTGCTGGTCGGGGGGGATGCCCTCCTTGTCC-TGAATCTT 350668
Query 139682 TGTTTTAGCTGTTCCACT-GTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGT 139740
| || | | || | ||||||| | ||| ||||| | ||| | |||||||||||
Sbjct 350667 GGACTTGACGTTGTCAATAGTGTCGGAAGACTCAACCTCGAGGGTGATGGTCTTGCCGGT 350608
Query 139741 CAACGTTTTTACGAATATTTGCAT 139764
||| || || ||||| || |||||
Sbjct 350607 CAAGGTCTTGACGAAGATCTGCAT 350584
>seq7
Length=1585612
Score = 104 bits (114), Expect = 2e-17
Identities = 141/197 (72%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 139568 GTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGTTTACCA 139627
|| ||||| || || ||||| || ||||||| |||| || |||||||| || |||
Sbjct 344057 GTGGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTGCCA 343998
Query 139628 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTGTTTT 139687
||| |||| || || ||||| ||||| || ||||| || ||||| ||| || ||
Sbjct 343997 GCAAAGATGAGGCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTG 343938
Query 139688 AGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTCAACGTT 139747
| | || | ||||||| | ||||||||||| ||| | |||||| || || | ||
Sbjct 343937 ACGTTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATCGTCTTCCCCGTGAGGGTC 343878
Query 139748 TTTACGAATATTTGCAT 139764
|| ||||| || |||||
Sbjct 343877 TTGACGAAAATCTGCAT 343861
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496063051277600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |