Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20pininemorale_20[genbank_20GCA_5F002165215.1_202017-06-02]
153 sequences; 47,778,485 total letters
Query= NC_006998.1
Length=194711
Score E
Sequences producing significant alignments: (Bits) Value
seq5 206 3e-48
seq7 140 4e-28
>seq5
Length=2590615
Score = 206 bits (228), Expect = 3e-48
Identities = 743/1146 (65%), Gaps = 22/1146 (2%)
Strand=Plus/Plus
Query 62897 AGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCA 62956
||| || || || || || || ||||| | || | | || | || || ||||||||
Sbjct 1618601 AGAGGCAAGGTTGCAGACAGCGACCTCGTCAGGAGCACAGTACTCGATAATTTCAGTGCA 1618660
Query 62957 AAGATTACTACACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATC 63016
||| || | ||| || || | || | ||| || ||||| |||||| |||||
Sbjct 1618661 AAGGTTGGAGCTTCGGATGGTACCGAGGTTCTTTTGGTTGCTCTTGCGGTTACAGGCATC 1618720
Query 63017 CTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGAC 63076
||| || || |||||||| | || || ||| |||| | || | ||| || | ||| |
Sbjct 1618721 CTTGTAGAGCATGAATGGGTTTCCGGTCTCAGTCTGGGCCTCGAGAATGGCGTACCAAA- 1618779
Query 63077 GACTC-GAGCCTTTATTATAGATTTGTATCTCCTTTCTCTT----TCGTATAGTGTATAC 63131
| || ||||||| ||| | ||| | |||| | || ||||| | |||
Sbjct 1618780 GCTTCTGAGCCTTGATTGTC---TTGCGAC-CCTTGCCCTCCTTCTCGTACTTTTCGTAC 1618835
Query 63132 AATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATC 63191
| |||||||| ||||| | | | | | ||||| || || | |||||||||
Sbjct 1618836 AGAGCCTCGAACTCCTCTCCGTAGCAGTCGGCGAGGCCAGGGCACTCGTTGGGACACATC 1618895
Query 63192 AACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCT 63251
| | ||| || |||| | | || || ||||| || |||||||| |||||||| ||
Sbjct 1618896 AGTGTCCAGTCACCGTTCTTTTCAACACGCTTCATGAAAAGATCAGGGATCCAAAGGGCG 1618955
Query 63252 ATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAAC 63311
| || ||||| | || | ||||| || || ||||| ||||| |||||
Sbjct 1618956 AGGAAAAGATCACGGGCACGGACCTCCTCCTTACCGTGGTTCTTACGGAGATCAAGGAAA 1619015
Query 63312 GCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTT 63371
| | | |||||| ||||| || || | ||| ||||| | | | || || || |||||
Sbjct 1619016 TCGAAGACATCAGAGTGCCAAGGCTCGAGGTAGATGGCAAAAGCACCGGGTCGCTTGTTG 1619075
Query 63372 CCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCG 63431
|| ||||| || | || | ||| ||||| || | || | | ||| |||| || |||
Sbjct 1619076 CCACCCTGGTCGACATACCGAGCAGTGTTGTTGAAGACACGAAGCATAGGAACAACACCA 1619135
Query 63432 TTTGATATACCATTGGTACCGGAGATATAGCTTCCACTGGCACGAATAT--TACTAATTG 63489
|| ||| |||| |||||||||| ||| || ||| | ||||||||| | | |||
Sbjct 1619136 TTCGATGTACCGTTGGTACCGGCGATGTATGAGCCAGTAGCACGAATACGGTGCACATT- 1619194
Query 63490 ATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGA 63549
|||||| || || || ||||| || ||||| | || || || | || || ||||
Sbjct 1619195 -TAGACCAATACCACCAGCCATCTTGGAGATCATGGCACAGGTCTTGAGAGTATCGTAGA 1619253
Query 63550 TACCCTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGAC 63609
| ||||| || || || || |||| | || | || || |||| |||| | ||
Sbjct 1619254 TTCCCTCAATACTGTCGTCCTTCATATCAACCAAGAAGCAAGATGACAATTGGGGCTGAG 1619313
Query 63610 TAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGAT 63669
|| || ||||| || | || || ||||| ||||| || | || ||| | ||||
Sbjct 1619314 GGGTGCCGGCATTGAAGAGCGTGGGGGAAGCATGCGTGAAGAACTTGCTAGACATCAGAT 1619373
Query 63670 TGTACGTCTCAATAGCTGAGTCTATATCC-CATTGATGAATTCCTACTGCGACACGCATT 63728
|||| ||||| | || || ||||| || || | || || | ||||||||
Sbjct 1619374 TGTATGTCTCCAAGACTCGCTCGATATCATCACCCCAGA-TACCAACAGACACACGCATG 1619432
Query 63729 AACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCC 63788
| |||||||||||| | || || ||||| || || || | | ||| ||| |||
Sbjct 1619433 ATCATGTGCTGAGGGCGCTCGACAATCTTACCGTCAATCTTGAGGAGGTATGATCGCTCC 1619492
Query 63789 AAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTG 63848
||||| || || ||||| || | |||| || || || || || | ||| | ||||
Sbjct 1619493 AAAGTCTTGAAGCCAAAGTATTGGTATTGGAAATCGCGGTCATAGACAATGGCAGAGTCC 1619552
Query 63849 AGTTTATCCTTATATTTGTTAACTATATCCATGGTGATACTT-GAAATAATCGGAGAATG 63907
| | ||||||| | | || | ||| || ||| || || || || || |
Sbjct 1619553 AACTCCTCCTTATGTCGCATGAC-GCACTCATAAGTATCCTTGGAGATCATGGGTGACGG 1619611
Query 63908 TTTCCCATTTTTAGGATTAACATAGTTGAATAAATC-CTC-CATCACTTCACTAAATAGt 63965
|| || || || || ||||||| | | | || ||| || || || || |
Sbjct 1619612 CCGGCCGTTCTTGGGGTTCACATAGTGGTAGAGGTCGCTCACAACAGCGGAC--CATTGC 1619669
Query 63966 ttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAGAATGGCATAATCC 64025
|| || || | |||||| || || || ||||| || | |||||| ||||||||||| ||
Sbjct 1619670 TTCTTGGTCTGCTTGTGAAGGTTGGAGACGGCAATGCGGGCGGCAAGAATGGCATAGTCG 1619729
Query 64026 GGATGT 64031
|| |||
Sbjct 1619730 GGGTGT 1619735
>seq7
Length=1585612
Score = 140 bits (154), Expect = 4e-28
Identities = 368/558 (66%), Gaps = 8/558 (1%)
Strand=Plus/Minus
Query 33304 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGT 33363
||||| || || ||| ||||||||||| | | || || |||||||| || || ||
Sbjct 1401149 CATGCAAAGTCAGTGTGAAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAAGTCAGA 1401090
Query 33364 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAG 33423
|| ||||| || |||||||| || ||||| || || || ||||| | ||| ||||||
Sbjct 1401089 CCAGGCATGAGACCACGCTTCTTGAGCCAGAAGATAGAGGCGAAGGCACCACTGAAGAAG 1401030
Query 33424 ATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGG---CGCTGTCATGT 33480
|| || || || ||||||||||||| || | || || | || | | || ||
Sbjct 1401029 ATACCCTCAACAGCAGCAAAGGCAACGAGACGCTGGGCAAAGGAGGAGTCCTTATCCTGG 1400970
Query 33481 ATCCA-CTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATT 33539
||||| | || ||||| || ||||||||| | || || || || || ||||| ||
Sbjct 1400969 ATCCATCGGATG-GCCCAGTCAGCCTTCTTTCGGATGCAGGGAATGGTCTCAATGGCGTT 1400911
Query 33540 AAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACAT 33599
||||||||| || | || || | || || ||||| | || || |
Sbjct 1400910 GAAGAGATAGGTTCGCTGGGCGGGCTCCTTGATGTATGTGTCGATAAGGAGGGAGTAGGT 1400851
Query 33600 TTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAAT 33659
|| ||||||||||| || || ||||| || |||||||| || | |||||| | ||
Sbjct 1400850 CTCGGAATGAATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCAACGAGCCTCAGGGAT 1400791
Query 33660 CTGTACTTCTGTACAAAATCGTTCCGCCAAATTTTCATTCACTATTCCGTCACTGGCTGC 33719
||| || || || ||||| || | | || || || || || || ||| ||| ||
Sbjct 1400790 CTGGACCTCACCACTGAATCGCTCGACGAGGTTCTCGTTGACGATACCATCAGAGGCAGC 1400731
Query 33720 AAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTA---GTTTATTCCA 33776
|| || || | | || | ||| | | || || | |||| | || |||||
Sbjct 1400730 GAAGAAAGCAAGGATGTGAGAGACAAAGAACTGCTCATCAGCAGTTAGGCGGTTGTTCCA 1400671
Query 33777 ATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTT 33836
|| | || ||| || || | ||| | || || | ||||| || || ||||| |||||
Sbjct 1400670 GTCGTGGAGATCCTTGGAGAGATCAATCTCCTCAGCAGTCCAGAAGGAAGCCTCAGCCTT 1400611
Query 33837 TTTATACATGTTCCAGAT 33854
|| ||||| | ||| ||
Sbjct 1400610 CTTGTACATTTGCCAAAT 1400593
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 622946008613480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |