Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20pininemorale_20[genbank_20GCA_5F002165215.1_202017-06-02] 153 sequences; 47,778,485 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq7 84.2 2e-11 seq15 82.4 7e-11 >seq7 Length=1585612 Score = 84.2 bits (92), Expect = 2e-11 Identities = 148/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 26765 CAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATC 26824 ||| ||||| | || || || || | || || || |||||||| | || | || || Sbjct 343857 CAAGATGCAGATTTTCGTCAAGACCCTCACGGGGAAGACGATCACCCTTGAGGTGGAGTC 343916 Query 26825 AAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGA 26884 |||||||||||| | ||||| ||||| ||||| || || || || ||||| Sbjct 343917 TTCCGACACCATCGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCCGA 343976 Query 26885 TCAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTA 26944 || || | ||||| | | ||||| || ||||| |||| | | | | |||||||| Sbjct 343977 CCAGCAGCGCCTCATCTTTGCTGGCAAGCAGCTCGAGGATGGCCGCACCCTGAGCGACTA 344036 Query 26945 TAACATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980 ||||| || || || || || |||| |||||||| Sbjct 344037 CAACATCCAGAAGGAGTCCACCCTCCACCTGGTCCT 344072 >seq15 Length=769536 Score = 82.4 bits (90), Expect = 7e-11 Identities = 131/188 (70%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 26793 ACTGGAAAATCGATCACCATCGAATTAGAATCAAACGACACCATCGAGCAAGTCAAACAA 26852 ||||| || | |||||| | || | || || ||| |||||||| | || || Sbjct 350890 ACTGGCAAGACCATCACCCTTGAGGTTGAGTCGTCCGATACCATCGACAATGTTAAGTCG 350949 Query 26853 AAGATTACCGACAAAGAAGGGATACCTCCCGATCAACAAAGACTCATTTACGGCGGCAAA 26912 |||||| ||||| || || || ||||| || ||||| | || || | | || || Sbjct 350950 AAGATTCAGGACAAGGAGGGCATCCCTCCTGACCAACAGCGCCTGATCTTTGCTGGAAAG 351009 Query 26913 CAACTCGAAGATGATAGAAACGTCAGCGACTATAACATTCAAAAAGAATCTACTATCCAT 26972 ||||| ||||| | ||| | | |||||| ||||||||||| ||||| ||| ||||| Sbjct 351010 CAACTTGAAGACGGCCGAACCCTTGCCGACTACAACATTCAAAAGGAATCCACTCTCCAT 351069 Query 26973 CTGGTCCT 26980 || ||||| Sbjct 351070 CTCGTCCT 351077 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478661484558160