Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20pininemorale_20[genbank_20GCA_5F002165215.1_202017-06-02] 153 sequences; 47,778,485 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq5 379 5e-100 >seq5 Length=2590615 Score = 379 bits (420), Expect = 5e-100 Identities = 1123/1702 (66%), Gaps = 52/1702 (3%) Strand=Plus/Minus Query 363400 AAGACGATGGAGAAATCCTACCTATCTCGT-ATCAATGGTGATATTGTTGAACGCCCGCA 363458 ||||| ||||| ||| ||||| ||| || | ||| | ||||| || ||||| || Sbjct 1619500 AAGACTTTGGAGCGATCATACCTC-CTCAAGATTGACGGTAAGATTGTCGAGCGCCCTCA 1619442 Query 363459 GCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGATGCCG--CGATT 363516 ||| ||| | |||||||| || |||||||| || || || |||| || ||| | Sbjct 1619441 GCACATGATCATGCGTGTGTCTGTTGGTATC---TG---GGGTGATGATATCGAGCGAGT 1619388 Query 363517 ----GAAACATATAAGCT----TCTAAGTGCTCGTGTATTCACGCACGCCACGCCAACAA 363568 || ||||| || || |||| || || | |||||||| || | || || Sbjct 1619387 CTTGGAGACATACAATCTGATGTCTA---GCAAGT-TCTTCACGCATGCTTCCCCCACGC 1619332 Query 363569 TGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAATGAAGG 363628 | | |||||| || || | | | || || |||| |||||||| | | | ||||||| Sbjct 1619331 TCTTCAATGCCGGCACCCCTCAGCCCCAATTGTCATCTTGCTTCTTGGTTGATATGAAGG 1619272 Query 363629 ACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAGAATG 363688 |||| || ||||| |||| || || || |||| ||||| | || ||||||| | Sbjct 1619271 ACGACAGTATTGAGGGAATCTACGATACTCTCAAGACCTGTGCCATGATCTCCAAGATGG 1619212 Query 363689 CAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGC-ACAGAACAGTTACATTCGCGGC 363747 | || || |||||| || | ||| | ||||||| || | | ||||| ||| Sbjct 1619211 CTGGTGGTATTGGTCTAAATGTGCACCGTATTCGTGCTACTGG-CTCATACATCGCCGGT 1619153 Query 363748 ACAGGGGGATAC-TCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTGCGAG 363806 || || ||| |||||||| | ||||| ||||||||||| || |||| ||||| | Sbjct 1619152 ACCAACGG-TACATCGAATGGTGTTGTTCCTATGCTTCGTGTCTTCAACAACACTGCTCG 1619094 Query 363807 GTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCCTCA 363866 ||| |||||||||||||| ||||| || || ||||| || || ||||||||| Sbjct 1619093 GTATGTCGACCAGGGTGGCAACAAGCGACCCGGTGCTTTTGCCATCTACCTCGAGCCTTG 1619034 Query 363867 TCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGGAATTGCG 363926 || | ||| | || || || ||||| ||||| || ||| || || ||||| | || Sbjct 1619033 GCACTCTGATGTCTTCGATTTCCTTGATCTCCGTAAGAACCACGGTAAGGAGGAGGTCCG 1618974 Query 363927 TGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTGGAGGC 363986 ||| |||||||| ||| || |||||| | |||| | ||| |||||||| || || Sbjct 1618973 TGCCCGTGATCTTTTCCTCGCCCTTTGGATCCCTGATCTTTTCATGAAGCGTGTTGA--A 1618916 Query 363987 AGGTAAG--AATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGATGTATGG 364044 | | | | | ||| |||| | || || |||| || || || || |||| | Sbjct 1618915 AAGAACGGTGACTGGACACTGATGTGTCCCAACGAGTGCCCTGGCCTCGCCGACTGCTAC 1618856 Query 364045 GGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCTCGTAAGACA 364104 || || || | | ||||| ||||||||||| || |||||| |||| ||| |||||| Sbjct 1618855 GGAGAGGAGTTCGAGGCTCTGTACGAAAAGTACGAGAAGGAGGGCAAGGGTCGCAAGACA 1618796 Query 364105 ATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACACCC 364164 || || |||||||| |||| ||||| | || | |||| |||||| |||| || Sbjct 1618795 ATCAAGGCTCAGAAGCTTTGGTACGCCATTCTCGAGGCCCAGACTGAGACCGGAAACCCA 1618736 Query 364165 TATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACAATT 364224 | ||| | ||||| ||| | || ||||||||| |||||| || |||| ||||| | | Sbjct 1618735 TTCATGCTCTACAAGGATGCCTGTAACCGCAAGAGCAACCAAAAGAACCTCGGTACCA-T 1618677 Query 364225 CAGCAG-AGCAACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGACTGCCGT 364283 | | || |||||| || || || ||||| || ||| ||||| |||||| || || Sbjct 1618676 CCGAAGCTCCAACCTTTGCACTGAAATTATCGAGTACTGTGCTCCTGACGAGGTCGCTGT 1618617 Query 364284 ATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGTAA---AAGATGGTACT---TTTGA 364337 || |||||||| || | | || || | || | | | |||| || | || Sbjct 1618616 CTGCAACCTTGCCTCTCTGTCTCTGCCCTCCTTCATCAACTACGATGAAGCTTGCTACGA 1618557 Query 364338 CCACCAGCATCTTTATGACGTAACCTATCATGCTACTTGCAATCTCGACAAGGTTATCGA 364397 | | || | | | | || | | || || | |||| | ||||| | ||||| Sbjct 1618556 CTTCAAGAAGTTGCACAAGGTCAGTCAGGTTGTTATTCGCAACTTGAACAAGATCATCGA 1618497 Query 364398 CAAGAATTATTATCCAATTCCTGAAGCCGAGC-GTTCTAATATGCGTCATCGCCCGATTG 364456 ||| | || || ||| | || | || ||| ||||| || || || |||| Sbjct 1618496 TGTGAACCACTA-CCCTGTCCAGGAGGCTCGCAACAGTAACATGCGCCACCGACCCATTG 1618438 Query 364457 GTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGATGCTC--AAGATGGCATTTGATTC 364514 |||| ||||| ||||||||||| || | ||| | ||||| ||| | || || || Sbjct 1618437 GTCTGGGTGTTCAGGGCCTCGCCGATGCTTTCCT--TGCTCTGCGTATGCCCTTCGAGTC 1618380 Query 364515 GCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAATGTATTTTGCCGCAATGAC 364574 || || ||||||| || || ||| ||||||| || || || ||| || || | || Sbjct 1618379 ACCCGAGGCTCGTGAGCTCAACAAGCAGATCTTCGAGACCATTTATCACGCTGCCCTCAC 1618320 Query 364575 TG-CTTCGTGTGATTTGGCAAAAACCAAGGGAAAGTACTCTACTTATGAGGGGTCCCCTC 364633 || || |||| | |||| || |||| ||||| || | |||| ||||| Sbjct 1618319 TGCCTCCGTG-CAGCTGGCTAAGGAGGAGGGTCCCTACTCCACCTTCAAGGGTTCCCCCG 1618261 Query 364634 TTTCGCAGGGAAAATTCCAGTTTGATCTATGGAATGTCACGCCATCTGTCCGATGGAACT 364693 || |||| | |||||||||| | ||||| |||| || |||| || ||| ||| Sbjct 1618260 CCTCTGAGGGTATCCTCCAGTTTGACATGTGGAACGTCAAACCCTCTGACCTCTGGGACT 1618201 Query 364694 GGGATACGCTACGTTCCAACGTTAAGAAGCATGGTACTCGCAAC--TC-CCTCGTTACAG 364750 |||| || || || | || |||| || || | || ||| || ||| || | Sbjct 1618200 GGGAGACTCTTCGAGAGGAAGTCAAGACACACGGCATCCGTAACAGTCTGCTCCTT---G 1618144 Query 364751 CGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACGAGTGCTTCGAACCGT 364810 | || ||||| || || ||| | ||||| || || ||||||||||||||||| || | Sbjct 1618143 CTCCTATGCCTACTGCCAGTACCTCCCAGATTCTGGGTAACAACGAGTGCTTCGAGCCCT 1618084 Query 364811 TTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTCCGGTAGTTAATAAGT 364870 || |||| | || |||||| ||||| | || || || | ||| || || | Sbjct 1618083 ACACCTCCAATATCTACCAACGCCGTGTTCTCGCTGGTGAGTTCCAGGTTGTCAACCCCT 1618024 Query 364871 ACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGCATGAAGAACTATATCA 364930 || ||||||| ||| |||| || |||||| || ||||||||| |||| Sbjct 1618023 GGCTGCTCAAGGACCTTGTCGACATGGGTCTGTGGTCCGATGCTATGAAGAACCGCATCA 1617964 Query 364931 TCGCCGCTAATGGTTCTGTGCAGAACATTCCAGGATTTCCAGAAGATCTGAAGCCTATTT 364990 | || | |||||||| | ||||||||||| | || | || | ||| || | | Sbjct 1617963 TTGCTGAGAATGGTTCCATTCAGAACATTCCCAACATCCCTGCCGACGTCAAGGCTCTGT 1617904 Query 364991 ACAAAACCGTATGGGAAATTTCCATGCGAACTCTCATTGATATGGCGGCCGATCGCGGTG 365050 |||| || || ||||| || || ||| || || | ||||| || ||||| |||| Sbjct 1617903 ACAAGACTGTCTGGGAGATCTCTCAGCGCCAGGTCGTTCAGATGGCTGCTGATCGAGGTG 1617844 Query 365051 CTTTTATCTGTCAGAGCCAGTC 365072 | || || |||| |||||| Sbjct 1617843 CCTTCATTGATCAGTCCCAGTC 1617822 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303351045019646