Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20pininemorale_20[genbank_20GCA_5F002165215.1_202017-06-02]
153 sequences; 47,778,485 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq5 379 5e-100
>seq5
Length=2590615
Score = 379 bits (420), Expect = 5e-100
Identities = 1123/1702 (66%), Gaps = 52/1702 (3%)
Strand=Plus/Minus
Query 363400 AAGACGATGGAGAAATCCTACCTATCTCGT-ATCAATGGTGATATTGTTGAACGCCCGCA 363458
||||| ||||| ||| ||||| ||| || | ||| | ||||| || ||||| ||
Sbjct 1619500 AAGACTTTGGAGCGATCATACCTC-CTCAAGATTGACGGTAAGATTGTCGAGCGCCCTCA 1619442
Query 363459 GCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGATGCCG--CGATT 363516
||| ||| | |||||||| || |||||||| || || || |||| || ||| |
Sbjct 1619441 GCACATGATCATGCGTGTGTCTGTTGGTATC---TG---GGGTGATGATATCGAGCGAGT 1619388
Query 363517 ----GAAACATATAAGCT----TCTAAGTGCTCGTGTATTCACGCACGCCACGCCAACAA 363568
|| ||||| || || |||| || || | |||||||| || | || ||
Sbjct 1619387 CTTGGAGACATACAATCTGATGTCTA---GCAAGT-TCTTCACGCATGCTTCCCCCACGC 1619332
Query 363569 TGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAATGAAGG 363628
| | |||||| || || | | | || || |||| |||||||| | | | |||||||
Sbjct 1619331 TCTTCAATGCCGGCACCCCTCAGCCCCAATTGTCATCTTGCTTCTTGGTTGATATGAAGG 1619272
Query 363629 ACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAGAATG 363688
|||| || ||||| |||| || || || |||| ||||| | || ||||||| |
Sbjct 1619271 ACGACAGTATTGAGGGAATCTACGATACTCTCAAGACCTGTGCCATGATCTCCAAGATGG 1619212
Query 363689 CAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGC-ACAGAACAGTTACATTCGCGGC 363747
| || || |||||| || | ||| | ||||||| || | | ||||| |||
Sbjct 1619211 CTGGTGGTATTGGTCTAAATGTGCACCGTATTCGTGCTACTGG-CTCATACATCGCCGGT 1619153
Query 363748 ACAGGGGGATAC-TCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTGCGAG 363806
|| || ||| |||||||| | ||||| ||||||||||| || |||| ||||| |
Sbjct 1619152 ACCAACGG-TACATCGAATGGTGTTGTTCCTATGCTTCGTGTCTTCAACAACACTGCTCG 1619094
Query 363807 GTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCCTCA 363866
||| |||||||||||||| ||||| || || ||||| || || |||||||||
Sbjct 1619093 GTATGTCGACCAGGGTGGCAACAAGCGACCCGGTGCTTTTGCCATCTACCTCGAGCCTTG 1619034
Query 363867 TCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGGAATTGCG 363926
|| | ||| | || || || ||||| ||||| || ||| || || ||||| | ||
Sbjct 1619033 GCACTCTGATGTCTTCGATTTCCTTGATCTCCGTAAGAACCACGGTAAGGAGGAGGTCCG 1618974
Query 363927 TGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTGGAGGC 363986
||| |||||||| ||| || |||||| | |||| | ||| |||||||| || ||
Sbjct 1618973 TGCCCGTGATCTTTTCCTCGCCCTTTGGATCCCTGATCTTTTCATGAAGCGTGTTGA--A 1618916
Query 363987 AGGTAAG--AATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGATGTATGG 364044
| | | | | ||| |||| | || || |||| || || || || |||| |
Sbjct 1618915 AAGAACGGTGACTGGACACTGATGTGTCCCAACGAGTGCCCTGGCCTCGCCGACTGCTAC 1618856
Query 364045 GGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCTCGTAAGACA 364104
|| || || | | ||||| ||||||||||| || |||||| |||| ||| ||||||
Sbjct 1618855 GGAGAGGAGTTCGAGGCTCTGTACGAAAAGTACGAGAAGGAGGGCAAGGGTCGCAAGACA 1618796
Query 364105 ATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACACCC 364164
|| || |||||||| |||| ||||| | || | |||| |||||| |||| ||
Sbjct 1618795 ATCAAGGCTCAGAAGCTTTGGTACGCCATTCTCGAGGCCCAGACTGAGACCGGAAACCCA 1618736
Query 364165 TATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACAATT 364224
| ||| | ||||| ||| | || ||||||||| |||||| || |||| ||||| | |
Sbjct 1618735 TTCATGCTCTACAAGGATGCCTGTAACCGCAAGAGCAACCAAAAGAACCTCGGTACCA-T 1618677
Query 364225 CAGCAG-AGCAACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGACTGCCGT 364283
| | || |||||| || || || ||||| || ||| ||||| |||||| || ||
Sbjct 1618676 CCGAAGCTCCAACCTTTGCACTGAAATTATCGAGTACTGTGCTCCTGACGAGGTCGCTGT 1618617
Query 364284 ATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGTAA---AAGATGGTACT---TTTGA 364337
|| |||||||| || | | || || | || | | | |||| || | ||
Sbjct 1618616 CTGCAACCTTGCCTCTCTGTCTCTGCCCTCCTTCATCAACTACGATGAAGCTTGCTACGA 1618557
Query 364338 CCACCAGCATCTTTATGACGTAACCTATCATGCTACTTGCAATCTCGACAAGGTTATCGA 364397
| | || | | | | || | | || || | |||| | ||||| | |||||
Sbjct 1618556 CTTCAAGAAGTTGCACAAGGTCAGTCAGGTTGTTATTCGCAACTTGAACAAGATCATCGA 1618497
Query 364398 CAAGAATTATTATCCAATTCCTGAAGCCGAGC-GTTCTAATATGCGTCATCGCCCGATTG 364456
||| | || || ||| | || | || ||| ||||| || || || ||||
Sbjct 1618496 TGTGAACCACTA-CCCTGTCCAGGAGGCTCGCAACAGTAACATGCGCCACCGACCCATTG 1618438
Query 364457 GTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGATGCTC--AAGATGGCATTTGATTC 364514
|||| ||||| ||||||||||| || | ||| | ||||| ||| | || || ||
Sbjct 1618437 GTCTGGGTGTTCAGGGCCTCGCCGATGCTTTCCT--TGCTCTGCGTATGCCCTTCGAGTC 1618380
Query 364515 GCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAATGTATTTTGCCGCAATGAC 364574
|| || ||||||| || || ||| ||||||| || || || ||| || || | ||
Sbjct 1618379 ACCCGAGGCTCGTGAGCTCAACAAGCAGATCTTCGAGACCATTTATCACGCTGCCCTCAC 1618320
Query 364575 TG-CTTCGTGTGATTTGGCAAAAACCAAGGGAAAGTACTCTACTTATGAGGGGTCCCCTC 364633
|| || |||| | |||| || |||| ||||| || | |||| |||||
Sbjct 1618319 TGCCTCCGTG-CAGCTGGCTAAGGAGGAGGGTCCCTACTCCACCTTCAAGGGTTCCCCCG 1618261
Query 364634 TTTCGCAGGGAAAATTCCAGTTTGATCTATGGAATGTCACGCCATCTGTCCGATGGAACT 364693
|| |||| | |||||||||| | ||||| |||| || |||| || ||| |||
Sbjct 1618260 CCTCTGAGGGTATCCTCCAGTTTGACATGTGGAACGTCAAACCCTCTGACCTCTGGGACT 1618201
Query 364694 GGGATACGCTACGTTCCAACGTTAAGAAGCATGGTACTCGCAAC--TC-CCTCGTTACAG 364750
|||| || || || | || |||| || || | || ||| || ||| || |
Sbjct 1618200 GGGAGACTCTTCGAGAGGAAGTCAAGACACACGGCATCCGTAACAGTCTGCTCCTT---G 1618144
Query 364751 CGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACGAGTGCTTCGAACCGT 364810
| || ||||| || || ||| | ||||| || || ||||||||||||||||| || |
Sbjct 1618143 CTCCTATGCCTACTGCCAGTACCTCCCAGATTCTGGGTAACAACGAGTGCTTCGAGCCCT 1618084
Query 364811 TTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTCCGGTAGTTAATAAGT 364870
|| |||| | || |||||| ||||| | || || || | ||| || || |
Sbjct 1618083 ACACCTCCAATATCTACCAACGCCGTGTTCTCGCTGGTGAGTTCCAGGTTGTCAACCCCT 1618024
Query 364871 ACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGCATGAAGAACTATATCA 364930
|| ||||||| ||| |||| || |||||| || ||||||||| ||||
Sbjct 1618023 GGCTGCTCAAGGACCTTGTCGACATGGGTCTGTGGTCCGATGCTATGAAGAACCGCATCA 1617964
Query 364931 TCGCCGCTAATGGTTCTGTGCAGAACATTCCAGGATTTCCAGAAGATCTGAAGCCTATTT 364990
| || | |||||||| | ||||||||||| | || | || | ||| || | |
Sbjct 1617963 TTGCTGAGAATGGTTCCATTCAGAACATTCCCAACATCCCTGCCGACGTCAAGGCTCTGT 1617904
Query 364991 ACAAAACCGTATGGGAAATTTCCATGCGAACTCTCATTGATATGGCGGCCGATCGCGGTG 365050
|||| || || ||||| || || ||| || || | ||||| || ||||| ||||
Sbjct 1617903 ACAAGACTGTCTGGGAGATCTCTCAGCGCCAGGTCGTTCAGATGGCTGCTGATCGAGGTG 1617844
Query 365051 CTTTTATCTGTCAGAGCCAGTC 365072
| || || |||| ||||||
Sbjct 1617843 CCTTCATTGATCAGTCCCAGTC 1617822
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1303351045019646
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |