Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20pininemorale_20[genbank_20GCA_5F002165215.1_202017-06-02]
153 sequences; 47,778,485 total letters
Query= NC_007921.1
Length=147544
Score E
Sequences producing significant alignments: (Bits) Value
seq7 122 8e-23
seq15 120 3e-22
>seq7
Length=1585612
Score = 122 bits (134), Expect = 8e-23
Identities = 163/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| || | || || || | || | ||| |||||||| || |||||||| ||||||
Sbjct 344087 CCACCACGGAGGCGGAGGACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGCTC 344028
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| |||||| ||||| ||||||||||| || |||| | ||||||||||| || |||
Sbjct 344027 AGGGTGCGGCCATCCTCGAGCTGCTTGCCAGCAAAGATGAGGCGCTGCTGGTCGGGGGGG 343968
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| || || ||||| ||| || ||||| | || | || |||| ||||| |
Sbjct 343967 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACC 343908
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|| | ||| | || || || || || || || ||||||||||||||
Sbjct 343907 TCAAGGGTGATCGTCTTCCCCGTGAGGGTCTTGACGAAAATCTGCAT 343861
>seq15
Length=769536
Score = 120 bits (132), Expect = 3e-22
Identities = 164/229 (72%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| || | || || || | ||| | || |||||||| ||||||||||||||
Sbjct 350810 CCACCACGGAGGCGGAGAACAAGATGAAGAGTGGACTCCTTCTGAATGTTGTAATCAGAG 350751
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| ||||| |||||| ||||||||||| ||| | || || || |||||||| || |||
Sbjct 350750 AGAGTGCGGCCGTCCTCAAGCTGCTTGCCGGCGAAAATCAAGCGTTGCTGGTCGGGGGGG 350691
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| || || ||||| || || ||||| | || | ||| |||| ||||| |
Sbjct 350690 ATGCCCTCCTTGTCCTGAATCTTGGACTTGACGTTGTCAATAGTGTCGGAAGACTCAACC 350631
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATGA 131236
|||| ||| | ||| || ||||| | || || ||||| ||||||||||
Sbjct 350630 TCGAGGGTGATGGTCTTGCCGGTCAAGGTCTTGACGAAGATCTGCATGA 350582
Score = 86.0 bits (94), Expect = 6e-12
Identities = 149/217 (69%), Gaps = 0/217 (0%)
Strand=Plus/Minus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| || | || || || | ||| | || || ||||||||||||||||| |||
Sbjct 351092 CCACCACGGAGGCGGAGGACGAGATGGAGAGTGGATTCCTTTTGAATGTTGTAGTCGGCA 351033
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| ||| || ||| || || ||||| || || |||| | ||||| ||||| ||||||
Sbjct 351032 AGGGTTCGGCCGTCTTCAAGTTGCTTTCCAGCAAAGATCAGGCGCTGTTGGTCAGGAGGG 350973
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| || || ||||| || ||| ||| | | || | ||||||| ||||| |
Sbjct 350972 ATGCCCTCCTTGTCCTGAATCTTCGACTTAACATTGTCGATGGTATCGGACGACTCAACC 350913
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGA 131224
|| | ||| | ||| || || || || || || ||||
Sbjct 350912 TCAAGGGTGATGGTCTTGCCAGTGAGGGTCTTGACGA 350876
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 472011897275520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |