Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20pininemorale_20[genbank_20GCA_5F002165215.1_202017-06-02]
153 sequences; 47,778,485 total letters
Query= NC_008291.1
Length=198050
Score E
Sequences producing significant alignments: (Bits) Value
seq5 219 5e-52
seq7 123 3e-23
>seq5
Length=2590615
Score = 219 bits (242), Expect = 5e-52
Identities = 629/957 (66%), Gaps = 14/957 (1%)
Strand=Plus/Plus
Query 62752 AGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCA 62811
||| || || || || || || ||||| | || | | || | || || ||||||||
Sbjct 1618601 AGAGGCAAGGTTGCAGACAGCGACCTCGTCAGGAGCACAGTACTCGATAATTTCAGTGCA 1618660
Query 62812 AAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATC 62871
||| || | |||||| || | || | ||| || ||||| |||||| |||||
Sbjct 1618661 AAGGTTGGAGCTTCGGATGGTACCGAGGTTCTTTTGGTTGCTCTTGCGGTTACAGGCATC 1618720
Query 62872 CTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGAC 62931
||| || || |||||||| | || || ||| |||| | || | ||| || | ||| |
Sbjct 1618721 CTTGTAGAGCATGAATGGGTTTCCGGTCTCAGTCTGGGCCTCGAGAATGGCGTACCAAA- 1618779
Query 62932 GACTC-GAGCCTTTATTATAGATTTGTATCTCTTTTCT--CTT-TCGTATAGTGTATACA 62987
| || ||||||| ||| | ||| | ||| | ||| ||||| | ||||
Sbjct 1618780 GCTTCTGAGCCTTGATTGTC---TTGCGACCCTTGCCCTCCTTCTCGTACTTTTCGTACA 1618836
Query 62988 ATCGTTCGAACTCGTCTCCCCAAACATTGTCCAGTCCAGGACATTCATCCGGACACATCA 63047
|||||||| ||||| | | | | || ||||| || || | ||||||||||
Sbjct 1618837 GAGCCTCGAACTCCTCTCCGTAGCAGTCGGCGAGGCCAGGGCACTCGTTGGGACACATCA 1618896
Query 63048 ACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTA 63107
| ||| || |||| | | || || ||||| || |||||||| |||||||| || |
Sbjct 1618897 GTGTCCAGTCACCGTTCTTTTCAACACGCTTCATGAAAAGATCAGGGATCCAAAGGGCGA 1618956
Query 63108 TAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACG 63167
|| ||||| | || | ||||| || || ||||| ||||| |||||
Sbjct 1618957 GGAAAAGATCACGGGCACGGACCTCCTCCTTACCGTGGTTCTTACGGAGATCAAGGAAAT 1619016
Query 63168 CCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTC 63227
| | | |||||| ||||| || || | ||| ||||| | | | || || || ||||| |
Sbjct 1619017 CGAAGACATCAGAGTGCCAAGGCTCGAGGTAGATGGCAAAAGCACCGGGTCGCTTGTTGC 1619076
Query 63228 CTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCAT 63287
| ||||| || | || | ||| ||||| || | || | | ||| |||| || |||||
Sbjct 1619077 CACCCTGGTCGACATACCGAGCAGTGTTGTTGAAGACACGAAGCATAGGAACAACACCAT 1619136
Query 63288 TGGATGTACCATTGGTCCCTGAGATATAGCTTCCACTGGCACGAATAT--TACTAATTGA 63345
| |||||||| ||||| || | ||| || ||| | ||||||||| | | |||
Sbjct 1619137 TCGATGTACCGTTGGTACCGGCGATGTATGAGCCAGTAGCACGAATACGGTGCACATT-- 1619194
Query 63346 TAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGAT 63405
|||||| || || || ||||| || ||||| | || || || | ||||| |||||
Sbjct 1619195 TAGACCAATACCACCAGCCATCTTGGAGATCATGGCACAGGTCTTGAGAGTATCGTAGAT 1619254
Query 63406 GCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACT 63465
||||| ||||| || ||| |||| | || | || || |||| |||| | ||
Sbjct 1619255 TCCCTCAATACTGTCGTCCTTCATATCAACCAAGAAGCAAGATGACAATTGGGGCTGAGG 1619314
Query 63466 AGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGAGTAAACCATTTTTCAGAAAGTAGATT 63525
|| || ||||| || | || || ||||| || || || | || ||| | |||||
Sbjct 1619315 GGTGCCGGCATTGAAGAGCGTGGGGGAAGCATGCGTGAAGAACTTGCTAGACATCAGATT 1619374
Query 63526 GTACGTCTCAATAGCTGAGTCTATATCC-CATTGATGAATTCCTACTGCGACACGCATTA 63584
||| ||||| | || || ||||| || || | || || | |||||||| |
Sbjct 1619375 GTATGTCTCCAAGACTCGCTCGATATCATCACCCCAGA-TACCAACAGACACACGCATGA 1619433
Query 63585 ACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCA 63644
|||||||||||| | || || ||||| || || || | | ||| ||| ||||
Sbjct 1619434 TCATGTGCTGAGGGCGCTCGACAATCTTACCGTCAATCTTGAGGAGGTATGATCGCTCCA 1619493
Query 63645 AAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGT 63701
|||| || || ||||| || | |||| || || || || || | ||| | ||||
Sbjct 1619494 AAGTCTTGAAGCCAAAGTATTGGTATTGGAAATCGCGGTCATAGACAATGGCAGAGT 1619550
>seq7
Length=1585612
Score = 123 bits (136), Expect = 3e-23
Identities = 370/566 (65%), Gaps = 9/566 (2%)
Strand=Plus/Minus
Query 32661 CATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGT 32720
||||| || || ||| ||||||||||| | | || | |||||||| || || ||
Sbjct 1401149 CATGCAAAGTCAGTGTGAAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAAGTCAGA 1401090
Query 32721 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAA 32780
|| ||||| || |||||||| || ||||| || || || || || | ||| |||||
Sbjct 1401089 CCAGGCATGAGACCACGCTTCTTGAGCCAGAAGATAGAGGCGAAGGCACCACTGAAGAAG 1401030
Query 32781 ATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGG---CGCTGTCATGT 32837
|| || || || || |||||||||| || | || || | || | | || ||
Sbjct 1401029 ATACCCTCAACAGCAGCAAAGGCAACGAGACGCTGGGCAAAGGAGGAGTCCTTATCCTGG 1400970
Query 32838 ATCCA-CTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATT 32896
||||| | || ||||| || ||||||||| | || || || ||||| || || ||
Sbjct 1400969 ATCCATCGGATG-GCCCAGTCAGCCTTCTTTCGGATGCAGGGAATGGTCTCAATGGCGTT 1400911
Query 32897 AAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACAT 32956
||||||||| || | || || | ||||| || || | || || |
Sbjct 1400910 GAAGAGATAGGTTCGCTGGGCGGGCTCCTTGATGTATGTGTCGATAAGGAGGGAGTAGGT 1400851
Query 32957 TTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAGCATCTAGCCTCGGTAAT 33016
|| ||||||||||| || || || || || ||||||||||| | |||||| | ||
Sbjct 1400850 CTCGGAATGAATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCAACGAGCCTCAGGGAT 1400791
Query 33017 CTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGC 33076
||| || || || ||||| || | | || || || || || || ||| ||| ||
Sbjct 1400790 CTGGACCTCACCACTGAATCGCTCGACGAGGTTCTCGTTGACGATACCATCAGAGGCAGC 1400731
Query 33077 AAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTA---GTTTATTCCA 33133
|| || || | | || | ||| | | || || | |||| | || |||||
Sbjct 1400730 GAAGAAAGCAAGGATGTGAGAGACAAAGAACTGCTCATCAGCAGTTAGGCGGTTGTTCCA 1400671
Query 33134 ATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTT 33193
|| | || ||| || || | ||| | || || | ||||| || || ||||| |||||
Sbjct 1400670 GTCGTGGAGATCCTTGGAGAGATCAATCTCCTCAGCAGTCCAGAAGGAAGCCTCAGCCTT 1400611
Query 33194 TTTATACATATTCCAGATGTCATGAT 33219
|| ||||| | ||| || | |||||
Sbjct 1400610 CTTGTACATTTGCCAAATCT-ATGAT 1400586
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 633630788178800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |