Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20pininemorale_20[genbank_20GCA_5F002165215.1_202017-06-02]
153 sequences; 47,778,485 total letters
Query= NC_009127.1
Length=295146
Score E
Sequences producing significant alignments: (Bits) Value
seq7 379 4e-100
seq5 313 5e-80
>seq7
Length=1585612
Score = 379 bits (420), Expect = 4e-100
Identities = 599/846 (71%), Gaps = 18/846 (2%)
Strand=Plus/Plus
Query 42309 ATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGAGGAGATTGACCTGGCCAAGGAC 42368
|||||||||||||| || ||| |||||| || ||||||||||| || |||||||
Sbjct 1400602 ATGTACAAGAAGGCTGAGGCTTCCTTCTGGACTGCTGAGGAGATTGATCTCTCCAAGGAT 1400661
Query 42369 ACGGCCGGCTGGGAGTCA-----CTGTCTGAGAACGAAAAGTTTTTCCTCAAAAACATAC 42423
|| |||| | || || ||| | || |||| || || |||| |
Sbjct 1400662 CTCCACGACTGGAA--CAACCGCCTAACTGCTGATGAGCAGTTCTTTGTCTCTCACATCC 1400719
Query 42424 TGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAGGTTCATGA 42483
| || |||||||| |||||||| || || ||||| |||||||| | | | ||||
Sbjct 1400720 TTGCTTTCTTCGCTGCCTCTGATGGTATCGTCAACGAGAACCTCGTCGAGCGATTCAGTG 1400779
Query 42484 AAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCATAGAGAACG 42543
||||| ||| | |||||| || |||||||||||||||||||| || ||||||
Sbjct 1400780 GTGAGGTCCAGATCCCTGAGGCTCGTTGCTTCTACGGCTTCCAGATCATGATGGAGAACA 1400839
Query 42544 TGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGATCCCGTCGAGCGTA 42603
| || || ||| ||| || || || |||| |||||| ||| |||| | |||| |
Sbjct 1400840 TTCATTCCGAGACCTACTCCCTCCTTATCGACACATACATCAAGGAGCCCGCCCAGCGAA 1400899
Query 42604 ACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGACTGGGCGC 42663
| || ||||| ||||| ||||| || ||||||||| |||||||| ||||||||
Sbjct 1400900 CCTATCTCTTCAACGCCATTGAGACCATTCCCTGCATCCGAAAGAAGGCTGACTGGGCCA 1400959
Query 42664 TCAACTGGATCGAGAGTCCCGACGCAACGTTCGGCGAGAGGCTGGTAGCCTTTACCGCCG 42723
|| |||||| || | ||| | | || | | || | || || |||||| | || |
Sbjct 1400960 TCCGATGGATCCAGGATAAGGACTCCTCCTTTGCCCAGCGTCTCGTTGCCTTTGCTGCTG 1401019
Query 42724 TCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAG-AAGGTG 42782
| ||||| ||||||||| || ||||||||||| ||||||||||||||| || |||
Sbjct 1401020 TTGAGGGTATCTTCTTCAGTGGTGCCTTCGCCTCTATCTTCTGGCTCAAGAAGCGTGGTC 1401079
Query 42783 TCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGCTGCATAGG 42842
|| ||||| || || || ||||| ||||| |||||| | |||||||| || || |
Sbjct 1401080 TC-ATGCCTGGTCTGACTTTCTCCAACGAGCTCATCTCTCGTGACGAGGGTCTTCACACT 1401138
Query 42843 GACTTTGCCTGCCTCCTGTTCTCGAGCCACCTC-AGGCACAAGCCCTCGAAGGAGCGGGT 42901
|||||||| |||||||| ||| |||||| ||| | | || ||| || | |
Sbjct 1401139 GACTTTGCATGCCTCCTCCACTC---TCACCTCAAGGGTCGTG-CCAGTAAGCAGATGAT 1401194
Query 42902 CCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCCTCACGCAGTCGCTGCC 42961
|| || |||||||| || ||||| || ||| ||||||||||||| | | || ||
Sbjct 1401195 CCAGGATATCATCACTGATGCCGTCACCATTGAGCAGGAGTTCCTCACCGAAGCTCTTCC 1401254
Query 42962 C-GTGTCCCTGGTCGGCATGAACCACGACCTCATGTGCAAGTACATCCAGTACGTCGCCG 43020
| ||| |||| ||||||||||| ||||||||| ||||||| ||| |||||| |
Sbjct 1401255 CTGTG-CCCTCCTCGGCATGAACTCTGACCTCATGAAGCAGTACATTGAGTTCGTCGCTG 1401313
Query 43021 ACCATCTCC-TGTGCCAGATGGGTCTCAGCCGCCTCTACAACACGCCGTGCCCCTTCGAC 43079
| | ||||| ||| | ||| || | ||||||| | | ||||||||||
Sbjct 1401314 ATCGTCTCCTTGTCGCTCTTGGCAACGAGAAG-GTCTACAAGGCCACCAACCCCTTCGAC 1401372
Query 43080 TTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTTTTCGAGAAGCGCGTCGCCGAC 43139
||||||||||||||||| | | |||||||||||||| ||||||||||| || ||||||
Sbjct 1401373 TTTATGGAGAACATCTCCCTTGGTGGCAAGACCAACTTCTTCGAGAAGCGTGTTGCCGAC 1401432
Query 43140 TACCAG 43145
||||||
Sbjct 1401433 TACCAG 1401438
>seq5
Length=2590615
Score = 313 bits (346), Expect = 5e-80
Identities = 1104/1698 (65%), Gaps = 65/1698 (4%)
Strand=Plus/Plus
Query 243741 TGAACTGGACGGGTGCGACGGCGGCCTTGGTCCTCAGGTAGTACATGCCGGTCTTGAGTC 243800
||||||| | || || | || |||| || | ||||||||||||||||||||||| |
Sbjct 1617691 TGAACTGAATAGGAGCAGCAGCAGCCTGTGTACGAAGGTAGTACATGCCGGTCTTGAGGC 1617750
Query 243801 CACTGGACCAGGCGTGGAGGTGCATGGCCGTCAGCTTCTTCATCTTGAGCTTTGGGTCGT 243860
|| |||| | | ||||||| || | ||| |||| || | ||
Sbjct 1617751 CAAGTTTCCAGCCTGCAAAGTGCATGCTGGTGATCTTGCCCATCGTGGG---------GT 1617801
Query 243861 CCTCGCACAGAAAGAGGTTGAGGGACTGGCTCTGGTCGACGAAGGGCGCCCGCTCTGCGG 243920
||| || || ||| || |||||| ||| || | ||||| | || || || |
Sbjct 1617802 CCTT---CATGTGGATGTTCAGTGACTGGGACTGATCAATGAAGGCACCTCGATCAGCAG 1617858
Query 243921 CCATGGTGATGAGGTCCTT---CTGAGATATCTCATACGCCGTCTTGTAGATGGGCTTGA 243977
|||| ||| | | ||| |||||| ||||| | | |||||||| | | |||||
Sbjct 1617859 CCATC-TGA--ACGACCTGGCGCTGAGAGATCTCCCAGACAGTCTTGTACAGAGCCTTGA 1617915
Query 243978 GGTGCTCGGGGAACCCTTCG--ATGTTCTGCACCGAGCCCTTGTGGACGATGAGCTGGGT 244035
|| | |||| || | |||||||| | || || || | | |||| || |
Sbjct 1617916 CGTCGGCAGGGATG--TTGGGAATGTTCTGAATGGAACCATTCTCAGCAATGATGCGGTT 1617973
Query 244036 GCGCATGTTATCGTTCCACAGGCCCAAGCGCTCCAGCGCCTCGACCAGGTGCCTGTTCAC 244095
||| |||| |||||| |||| | | || ||| || ||| ||| ||
Sbjct 1617974 CTTCATAGCATCGGACCACAGACCCATGTCGACAAGGTCCTTGAGCAGCCAGGGGTTGAC 1618033
Query 244096 CACCTGAAACTCTCCCGACAGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGCGGCTCGAT 244155
||||| ||||| || | || || ||||| ||||||| ||| | || |||||||
Sbjct 1618034 AACCTGGAACTCACCAGCGAGAACACGGCGTTGGTAGATATTGGAGGTGTAGGGCTCGAA 1618093
Query 244156 GCTCTCCGTGTTGCCCAGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGACACCAGCAG 244215
|| ||| |||| ||||| ||||| | || || ||||| ||||| || | | |||||
Sbjct 1618094 GCACTCGTTGTTACCCAGAATCTGGGAGGTACTGGCAGTAGGCATAGGAGCAAGGAGCAG 1618153
Query 244216 ACTGTTCCTCACGCCGTGCCTCTGGA-TGCGGAGTCTGAGCTCGTTCCAGTCCCACATGC 244274
|||||| | | |||||| ||| || | | || |||| |||| | || |
Sbjct 1618154 ACTGTTACGGATGCCGTGTGTCTTGACTTC-----CT---CTCGAAG-AGTCTCCCAGTC 1618204
Query 244275 CCGAGAGGTCCTCGCGTTTGAGGCCCCACATGTCAAACTGCAGCAGCCCCTTGCTGACGG 244334
|| ||||||| | |||||| | ||||||||||||||| || | |||| | |||
Sbjct 1618205 CC-AGAGGTCAGAGGGTTTGACGTTCCACATGTCAAACTGGAGGATACCCTCAGAGGCGG 1618263
Query 244335 GGCTGCCCTCGTAGGTCGGGTAGGGACCGTCGCGCTGGGCCAGCTT-ACAGCTCTCGTCG 244393
|| |||| | |||| | ||||||||| || || ||||||| || | || |
Sbjct 1618264 GGGAACCCTTGAAGGTGGAGTAGGGACCCTCCTCCTTAGCCAGCTGCACGGAGGCAGT-G 1618322
Query 244394 AGGGCGGCGTAGTAGATGGTCTCGAAGATCATCTTGTTCATGTCGCGGGCCTTGCCGCAG 244453
||||| |||| || ||||||||||||||| |||||| | || || |||| | |
Sbjct 1618323 AGGGCAGCGTGATAAATGGTCTCGAAGATCTGCTTGTTGAGCTCACGAGCCTCGGGTGAC 1618382
Query 244454 GTGAAGGGGATGCCCATCATCATGAAGACGTCGGCCAGTCCCTGCACGCCGATGCCGATG 244513
|||||| || | || | ||| | ||||| || ||||| || || | || |||
Sbjct 1618383 TCGAAGGGCATACGCAGAGCAAGGAAAGCATCGGCGAGGCCCTGAACACCCAGACCAATG 1618442
Query 244514 GGTCTGTGTCGCTTGTTGGAGC-GCATGGCTTCGGGCACGGGGTAAAAGTTGCCGTCGAT 244572
|||| ||| ||| |||| | || | || | || || ||||| ||| | |||||
Sbjct 1618443 GGTCGGTGGCGCATGTTACTGTTGCGAGCCTCCTGG-ACAGGGTAGTGGTTCACATCGAT 1618501
Query 244573 CACCTTGTTGAGGTTGCGGGTGATCATGCGGAC-GACGTCGGCCAGCAGCTGAAAGTCGT 244631
| |||||| | |||||| | | || | ||| ||| | | || | || |||||||
Sbjct 1618502 GATCTTGTTCAAGTTGCGAATAA-CAACCTGACTGACCTTGTGCAACTTCTTGAAGTCGT 1618560
Query 244632 ACTCGTAGGGATCCTCGGCGATGGTGATCCTCACAAACTCGTTGAGGGCGACGCTGGCCA 244691
| | | | || ||| | || ||| | | | || | || ||| |
Sbjct 1618561 A---GCAAGCTTCATCGTAGTTGATGA-----AGGAGGGCAGAGACAGAGA----GGCAA 1618608
Query 244692 GGTTGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGAGGTTAC 244751
|||||||||| || ||||| || | ||||| || ||| || ||||| |||||
Sbjct 1618609 GGTTGCAGACAGCGACCTCGTCAGGAGCACAGTACTCGATAATTTCAGTGCAAAGGTTGG 1618668
Query 244752 TGCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTTGTAGA 244811
|| |||||| || |||| || || ||| |||| ||| ||||| ||||||||||
Sbjct 1618669 AGCTTCGGATGGTACCGAGGTTCTTTTGGTTGCTCTTGCGGTTACAGGCATCCTTGTAGA 1618728
Query 244812 GCATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGAGGTCCCTAG 244871
||||||| || |||||||| |||||| |||| | | || ||| || | | ||
Sbjct 1618729 GCATGAATGGGTTTCCGGTCTCAGTCTGGGCCTCGAGAATGGCGTACCAAAGCTTCTGAG 1618788
Query 244872 CCTTGACCGTCCTGCGAGCCTTGCCCTCTGCCTCGTAGCGGGTGTACAGGGCCTCGAACT 244931
|||||| ||| ||||| |||||||||| |||||| |||||| ||||||||||
Sbjct 1618789 CCTTGATTGTCTTGCGACCCTTGCCCTCCTTCTCGTACTTTTCGTACAGAGCCTCGAACT 1618848
Query 244932 CGGGGCCCCAGACCTCGTCTAGGCCGGGGCACGACGCCGGG-CACATGAGACTCCACTCG 244990
| || || ||| | ||||| |||||| || ||| ||||| || |||| ||
Sbjct 1618849 CCTCTCCGTAGCAGTCGGCGAGGCCAGGGCAC-TCGTTGGGACACATCAGTGTCCAGTCA 1618907
Query 244991 CCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGAGGTCC 245050
||| | | || | || |||||| || || |||||||| ||||| |||| || ||
Sbjct 1618908 CCGTTCTTTTCAACACGCTTCATGAAAAGATCAGGGATCCAAAGGGCGAGGAAAAGATCA 1618967
Query 245051 CTGGTCCTCTGCTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGACGTCG 245110
| || | ||| ||| || |||||| | || || | || || ||||| ||
Sbjct 1618968 CGGGCACGGACCTCCTCCTTACCGTGGTTCTTACGGAGATCAAGGAAATCGAAGACATCA 1619027
Query 245111 ACGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCCCTGGTCC 245170
|||||| ||||| | ||||| || | || ||||| ||||||||||| ||||||||
Sbjct 1619028 GAGTGCCAAGGCTCGAGGTAGATGGCAAAAGCACCGGGTCGCTTGTTGCCACCCTGGTCG 1619087
Query 245171 ACCATCCTCTCGAGC----GCGTTGAAGATGCGCAGGGTAGGCACTATGCCGTTAGAGTG 245226
| ||| | ||||| |||||||| || || |||| || | || || ||
Sbjct 1619088 A-CATAC---CGAGCAGTGTTGTTGAAGACACGAAGCATAGGAACAACACCATTCGATGT 1619143
Query 245227 GCCGTTGGTGCCCTTGATGTAGGCGCC-CTTGC-CCCTGAGGTTGCTGATGGACATGCCT 245284
|||||||| || |||||| | ||| | || | | | ||| || | | ||
Sbjct 1619144 ACCGTTGGTACCGGCGATGTATGAGCCAGTAGCACGAATACGGTGCACATTTAGA--CCA 1619201
Query 245285 AGTCCGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTGCTATGCCCTCC 245344
| || || || ||||||||| | ||| ||| |||||| || || || |||||
Sbjct 1619202 ATACCACCAGCCATCTTGGAGATCATGGCACAGGTCTTGAGAGTATCGTAGATTCCCTCA 1619261
Query 245345 ATGCTGTCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTGGGGCTTGGGGCTGCAC 245404
|| ||||| |||||| | | || ||||| || |||| ||||||| ||| |||
Sbjct 1619262 ATACTGTCGTCCTTCATATCAACCAAGAAGCAAGATGACAATTGGGGCTGAGGGGTGCCG 1619321
Query 245405 GAGTTGAACAGAGTGGGG 245422
| ||||| || ||||||
Sbjct 1619322 GCATTGAAGAGCGTGGGG 1619339
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 944337393951280
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