Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20pininemorale_20[genbank_20GCA_5F002165215.1_202017-06-02]
153 sequences; 47,778,485 total letters
Query= NC_009899.1
Length=344691
Score E
Sequences producing significant alignments: (Bits) Value
seq7 118 2e-21
seq31 104 5e-17
>seq7
Length=1585612
Score = 118 bits (130), Expect = 2e-21
Identities = 299/445 (67%), Gaps = 10/445 (2%)
Strand=Plus/Plus
Query 243286 TCATTTGCTGAGCGTCTCGTCGCCTGGGTGTGC-GTTGAAGGTATTCTGTTTTCCGGGAG 243344
|| ||||| |||||||||| |||| | ||| ||||| ||||| || | ||| | | |
Sbjct 1400986 TCCTTTGCCCAGCGTCTCGTTGCCTTTGC-TGCTGTTGAGGGTAT-CT-TCTTCAGTG-G 1401041
Query 243345 TTTCTGCGCC---ATCTTTTGGCTGCGGAACAAAGGTGTGATGCCTGGCCTCGGTCTGTC 243401
| || |||| ||||| ||||| ||| ||| | |||||||| || | | ||
Sbjct 1401042 TGCCTTCGCCTCTATCTTCTGGCTCAAGAAGCGTGGTCTCATGCCTGGTCTGACTTTCTC 1401101
Query 243402 TAACGAGTTCATCAGTCGCGACGAGGGCCTTCACCAACAGTTCGGTGAGCTTATGTATTC 243461
|||||| ||||| ||| |||||||| |||||| | || | || | | ||
Sbjct 1401102 CAACGAGCTCATCTCTCGTGACGAGGGTCTTCACACTGACTTTGCATGCCTCCTCCACTC 1401161
Query 243462 AAAGCTCCAGAA-CAAGCTACCATTCGAAACGGTCAAACAAATCATCACAGAAGCAGTTG 243520
| ||| || | || | | | | | | || | | |||||||| || || ||
Sbjct 1401162 TCACCTCAAGGGTCGTGCCAGTAAGC-AGATGATCCAGGATATCATCACTGATGCCGTCA 1401220
Query 243521 AAAACGAAAAGGAATTCATTTGCGACGCTATTCCATGCCGGCTTATTGGCATGAACTCTG 243580
| || |||| ||| | ||| ||| |||| || || | |||||||||||||
Sbjct 1401221 CCATTGAGCAGGAGTTCCTCACCGAAGCTCTTCCCTGTGCCCTCCTCGGCATGAACTCTG 1401280
Query 243581 AACTCATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTCATCGCGCTTGGTTATG 243640
| |||||| |||||||| || ||||| || || || | | |||| ||||| | |
Sbjct 1401281 ACCTCATGAAGCAGTACATTGAGTTCGTCGCTGATCGTCTCCTTGTCGCTCTTGGCAACG 1401340
Query 243641 AGAAAGTGTACAACTCCAAGAACCCCTTTGCCTTTATGGAGCTCATTTCGCTTCAAGGGA 243700
|||| || ||||| ||| |||||||| | |||||||||| ||| || ||| || |
Sbjct 1401341 AGAAGGTCTACAAGGCCACCAACCCCTTCGACTTTATGGAGAACATCTCCCTTGGTGGCA 1401400
Query 243701 AAACTAACTTCTTCGAAAAGCGTGT 243725
| || ||||||||||| ||||||||
Sbjct 1401401 AGACCAACTTCTTCGAGAAGCGTGT 1401425
>seq31
Length=392470
Score = 104 bits (114), Expect = 5e-17
Identities = 175/251 (70%), Gaps = 2/251 (1%)
Strand=Plus/Plus
Query 334105 AGTCAATGATAGCCATGTTAGAATCGGACCCGTCGAGATCGTGTTCCACGTAAGCAGTTT 334164
|||||||| | | ||| | || ||| | ||| || ||||| || ||| | |||| |
Sbjct 97746 AGTCAATGGTGGTCATCTCAGTATCAGCGGAGTCAAGGTCGTGCTCGACGAAGACAGTCT 97805
Query 334165 TCAAAACA-TCCGCAGAGGGGAACCCTTCAAGCTGACCGTTCACAATAGCGCGCATCAGA 334223
| | | || || |||| |||||| ||| ||| |||| ||||||||||| |||
Sbjct 97806 TGACCTCGCTCTGCTTAGGGAAACCCT-CAACCTGCTCGTTGTTGATAGCGCGCATGAGA 97864
Query 334224 GTTGATTTACCCGCCCCGTTTGGCCCACACAGACCGTAGCGGTTTCCACGCTTCAGATTG 334283
|| || || || | ||||| || || || |||||||| || | |||||||| ||| |
Sbjct 97865 GTGGACTTTCCGGAACCGTTGGGACCGCAAAGACCGTAACGCTGACCACGCTTGAGACGG 97924
Query 334284 AACCGCGTATTGTTCAGAAGAATTTTTCCACCATATGCCAGAGAAAATTCACAATCACAC 334343
| | || | ||| |||||||| || |||| || || ||||| || ||| | ||
Sbjct 97925 AGATGGGTCTGGTTGAGAAGAATCTTGGCACCGTAGGCAAGAGAGAAGGTACAGTTGCAA 97984
Query 334344 AGATCCTCACC 334354
|||||||||||
Sbjct 97985 AGATCCTCACC 97995
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1102877838010550
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |