Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20pininemorale_20[genbank_20GCA_5F002165215.1_202017-06-02] 153 sequences; 47,778,485 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq5 201 1e-46 seq7 158 1e-33 >seq5 Length=2590615 Score = 201 bits (222), Expect = 1e-46 Identities = 1094/1723 (63%), Gaps = 51/1723 (3%) Strand=Plus/Plus Query 113565 TGAACTGAATGGGTCTCGCCTTGGCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCC 113624 |||||||||| || || |||| || || ||||||||||| || |||||||| | Sbjct 1617691 TGAACTGAATAGGAGCAGCAGCAGCCTGTGTACGAAGGTAGTACATGCCGGTCTTGAGGC 1617750 Query 113625 CCTGCTTCCAGGCATACATA-TGCATCGAGGACAACTTGGAGAGTGTTGGACTTTCCATG 113683 | | |||||| | | || | ||||| || | |||| | || || | |||| Sbjct 1617751 CAAGTTTCCAGCC-TGCAAAGTGCATGCTGGTGATCTTGCCCATCGTGGGGTCCTTCATG 1617809 Query 113684 AAGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCACGATCCGCCGCCATATCAATC 113743 || ||||| ||||| ||||| |||||| || ||||| || ||||| | || Sbjct 1617810 TGGATGTTCAGTGACTGGGACTGATCAATGAAGGCACCTCGATCAGCAGCCATCTGAACG 1617869 Query 113744 ACATCCTTCATCTTGATTTCCCACACAGTTCTGTAGAGGTTCTTAATATCATCTGGGATA 113803 || | | ||| ||||| ||||| |||| || ||| | || | ||||| Sbjct 1617870 ACCTGGCGCTGAGAGATCTCCCAGACAGTCTTGTACAGAGCCTTGACGTCGGCAGGGATG 1617929 Query 113804 TCCACGATATTTTGGATGGAGCCACCCGCCTTGACCATGAGATCCTTCATATCCTTTGAC 113863 | || || || ||||| ||| | | | ||| | | ||||||| | | ||| Sbjct 1617930 TTGGGAATGTTCTGAATGGAACCATTCTCAGCAATGATGCGGTTCTTCATAGCATCGGAC 1617989 Query 113864 CAGAGACCAATCTTTTTGAGATCCTCCACGAGATGCTTATTGACAACAACAAACTCACCC 113923 || ||||| || | || |||| | || |||||||| |||||||| Sbjct 1617990 CACAGACCCATGTCGACAAGGTCCTTGAGCAGCCAGGGGTTGACAACCTGGAACTCACCA 1618049 Query 113924 GCGAGGGTGCGTCTCAGATAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCC 113983 ||||| || | | |||||||||| ||||| ||||| |||||||| ||||||||| Sbjct 1618050 GCGAGAACACGGCGTTGGTAGATATTGGAGGTGTAGGGCTCGAAGCACTCGTTGTTACCC 1618109 Query 113984 AAGATTTGGGCGGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCC 114043 | || |||| ||| ||| || ||||| || || | ||| || |||||||||| || Sbjct 1618110 AGAATCTGGGAGGTACTGGCAGTAGGCATAGGAGCAAGGAGCAGACTGTTACGGATGCCG 1618169 Query 114044 TTTTCCCTAATGCGTTC-CTTGAGG-GCGTCCCAGTCGTAGTTGAGCTTTGTCTCCCCCT 114101 | | | | | | | | || || | | |||||||| || | | | | | Sbjct 1618170 TGTGTCTTGA--CTTCCTCTCGAAGAGTCTCCCAGTCCCAGAGGTCAGAGGGTTTGACGT 1618227 Query 114102 GCCACATATCAAACTGGAGGATACCTTGGGAGGCTGGCGATCCCTCAAATGTCTCGTATG 114161 |||||| ||||||||||||||||| | ||||| || || |||| || || ||| | Sbjct 1618228 TCCACATGTCAAACTGGAGGATACCCTCAGAGGCGGGGGAACCCTTGAAGGTGGAGTAGG 1618287 Query 114162 GGCCCTCAACCTCCGCCAATT---CGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCT 114218 | ||||| ||| |||| | ||||| || |||||| |||||||| || |||| Sbjct 1618288 GACCCTCCTCCTTAGCCAGCTGCACGGAG---GCAGTGAGGGCAGCGTGATAAATGGTCT 1618344 Query 114219 CAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAA-A 114277 | || || | || | | |||||| || || || | | || || | | Sbjct 1618345 CGAAGATCTGCTTGTTGAGCTCACGAGCCTCGGGTGACTCGAAGGGCATACG-CAGAGCA 1618403 Query 114278 ATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGAC 114337 | || |||| ||||| || || ||||| || ||||| || || || | ||| ||| Sbjct 1618404 AGGAAAGCATCGGCGAGGCCCTGAACACCCAGACCAATGGGTCGGTGGCGCATGTTACTG 1618463 Query 114338 TTTCGAGCGGTCTCCACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTG 114397 || ||||| || || || || ||| |||||| | | | || | || | Sbjct 1618464 TTGCGAGCCTCCTGGACAGGGTAGTGGTTCACATCGATGATCTTGTTCAAGTTGCGAATA 1618523 Query 114398 ACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTG-AC 114456 ||||||| ||| | || | ||| | | | || | || || |||||| | | Sbjct 1618524 ACAACCTGACTGACCTTGTGCAACTTCTTGAAGTCGTA---GCAAG---CTTCATCGTAG 1618577 Query 114457 ATACTTAGGAAGGGCG-----ATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCA 114511 | | | | ||||| | || || || || || |||| | ||| || | || Sbjct 1618578 TTGATGAAGGAGGGCAGAGACAGAGAGGCAAGGTTGCAGACAGCGACCTCGTCAGGAGCA 1618637 Query 114512 GTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGA 114571 |||||| |||||||| || || | || || || ||||| || | ||||||||| Sbjct 1618638 CAGTACTCGATAATTTCAGTGCAAAGGTTGGAGCTTCGGATGGTACCGAGGTTCTTTTGG 1618697 Query 114572 TTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGG 114631 || ||| |||||| ||||||||||| |||||| |||| | || ||||| || ||| Sbjct 1618698 TTGCTCTTGCGGTTACAGGCATCCTTGTAGAGCATGAATGGGTTTCCGGTCTCAGTCTGG 1618757 Query 114632 GACTTGAGAATAGCCTTCCAGA-CATCGGCGGCTGGCACAGTGGCGTTGG---CTCGCCC 114687 | || |||||| || | ||| | | || | | || | | || | | | || | || Sbjct 1618758 GCCTCGAGAATGGCGTACCAAAGCTTCTGAGCCTTG---ATTGTCTTGCGACCCTTG-CC 1618813 Query 114688 CTCCTCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCC 114747 ||||| |||||||||| ||| || || || ||||| || || | || | ||| || Sbjct 1618814 CTCCTTCTCGTACTTTTCGTACAGAGCCTCGAACTCCTCTCCGTAGCAGTCGGCGAGGCC 1618873 Query 114748 TGGTGCCTTATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACACGCTTCATGAA 114807 || || | || || | || | ||| | ||| || ||||||||||||||||| Sbjct 1618874 AGGGCACTCGTTGGGACACATCAGTGTCCAGTCACCGTTCTTTTCAACACGCTTCATGAA 1618933 Query 114808 GAGGTCTGGGATCCAGAGAGCTGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTG 114867 || || |||||||| || || ||| ||||| || || | || || | || || Sbjct 1618934 AAGATCAGGGATCCAAAGGGCGAGGAAAAGATCACGGGCACGGACCTCCTCCTTACCGTG 1618993 Query 114868 ATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGC 114927 || ||| | || | || || | || ||| | |||||| || || ||||| | || Sbjct 1618994 GTTCTTACGGAGATCAAGGAAATCGAAGACATCAGAGTGCCAAGGCTCGAGGTAGATGGC 1619053 Query 114928 GATTG-AC-----CCCTTACGACGACCAGCCTGGTTTACATACCTCGCTGTGGCATTAAA 114981 | | || | ||| | | ||| |||||| ||||||| || ||| || || Sbjct 1619054 AAAAGCACCGGGTCGCTT--GTTG-CCACCCTGGTCGACATACCGAGCAGTGTTGTTGAA 1619110 Query 114982 TACGCGAAGCATTGGAATGATACCATCAGATTGGCCATTTGT-CCCCCGA-ATACGAGAC 115039 || |||||||| |||| | ||||| ||| || || || || ||| || ||| | Sbjct 1619111 GACACGAAGCATAGGAACAACACCATTCGATGTACCGTTGGTACCGGCGATGTATGAGCC 1619170 Query 115040 TTATTGGCTCTGACATCATGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGC 115099 | | || | | | || | | | ||||||||| || ||| ||| ||||| Sbjct 1619171 --AGTAGCACGAATACGGTGCACATTTAGACCAATACCACCAGCCATCTTGGAGATCATG 1619228 Query 115100 GCGCACTCCGTGAGACTGCCGTAGATCCCGTCGATCGAGTCACCCTTATTTGCGATAAGG 115159 || || | ||||| | ||||||| || || || ||| |||| | | | | | Sbjct 1619229 GCACAGGTCTTGAGAGTATCGTAGATTCCCTCAATACTGTCGTCCTTCATATCAACCAAG 1619288 Query 115160 AAGCAGCTCGACATTTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGG 115219 ||||| |||| ||| ||| || || || || |||||||| || || | || || Sbjct 1619289 AAGCAAGATGACAATTGGGGCTGAGGGGTGCCGGCATTGAAGAGCGTGGGGGAAGCATGC 1619348 Query 115220 ATGAACATACCTTG--GGACATCTTATCGTAGGTCTCCAAGAC 115260 ||| | | |||| |||||| || ||| ||||||||||| Sbjct 1619349 GTGA--AGAACTTGCTAGACATCAGATTGTATGTCTCCAAGAC 1619389 >seq7 Length=1585612 Score = 158 bits (174), Expect = 1e-33 Identities = 312/459 (68%), Gaps = 16/459 (3%) Strand=Plus/Minus Query 125758 GTAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCAT 125817 |||||| |||| ||||||||||||||||| ||||| || | | | ||| |||||||| Sbjct 1401435 GTAGTCGGCAACACGCTTCTCGAAGAAGTTGGTCTTGCCACCAAGGGAGATGTTCTCCAT 1401376 Query 125818 AAAATCAAATGGGTTCTTTGAGTTCCAAA-----TTGTTGGCACCCCAATCTGTTTGAGG 125872 ||| || || ||||| | | || | | | |||| |||| ||| Sbjct 1401375 AAAGTCGAAGGGGTTGGTGGCCTTGTAGACCTTCTCGTTG-----CCAAGAGCGACAAGG 1401321 Query 125873 AGACGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAGG 125932 |||||||| | |||| |||||||||||| ||| ||||||||||| |||| |||| Sbjct 1401320 AGACGATCAGCGACGAACTCAATGTACTGCTTCATGAGGTCAGAGTTCATGCCGAGGAGG 1401261 Query 125933 TTACATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATTTCCACGGCTTCCCGCACGATG 125992 ||| || || || || || |||| ||| |||||| ||||| || | ||| Sbjct 1401260 GCACAGGGAAGAGCTTCGGTGAGGAACTCCTGCTCAATGGTGACGGCATCAGTGATGATA 1401201 Query 125993 GCGTGAATGGTGTCCACCC---CAGGTCTATTGCGCAAAGTCTTGAAGAGTTCCACGGCA 126049 | || || | | | | || | | ||| | || | || ||| || | || Sbjct 1401200 TCCTGGATCATCTGCTTACTGGCACGACCCTTGAGGTGAGAGTGGAGGAGG--CATG-CA 1401144 Query 126050 AACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGC 126109 || || ||| |||||||||||||| |||||||| || || ||||| ||| || ||| Sbjct 1401143 AAGTCAGTGTGAAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAAGTCAGACCAGGC 1401084 Query 126110 ATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCC 126169 |||||||| |||||||| | |||||| || | || | ||| ||||||||| ||| Sbjct 1401083 ATGAGACCACGCTTCTTGAGCCAGAAGATAGAGGCGAAGGCACCACTGAAGAAGATACCC 1401024 Query 126170 TCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAG 126208 || ||| || || |||| |||||||| ||||||||| Sbjct 1401023 TCAACAGCAGCAAAGGCAACGAGACGCTGGGCAAAGGAG 1400985 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597352457561240