Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20pininemorale_20[genbank_20GCA_5F002165215.1_202017-06-02]
153 sequences; 47,778,485 total letters
Query= NC_011183.1
Length=154641
Score E
Sequences producing significant alignments: (Bits) Value
seq5 219 4e-52
>seq5
Length=2590615
Score = 219 bits (242), Expect = 4e-52
Identities = 1058/1667 (63%), Gaps = 34/1667 (2%)
Strand=Plus/Minus
Query 93718 TACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGCAGG 93777
||| | ||||||| |||||| ||| ||||| || |||||||||||||| || || | |
Sbjct 1619518 TACCAATACTTTGGCTTCAAGACTTTGGAGCGATCATACCTCCTCAAGATTGACGGTAAG 1619459
Query 93778 GTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCACGAC 93837
|| |||||| || || || || | ||||| || | | || || || | ||
Sbjct 1619458 ATTGTCGAGCGCCCTCAGCACATGATCATGCGTGTGTCTGTTGGTATCTGGGGTGATGAT 1619399
Query 93838 ATGCCGAATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATAC-CATGGCCAC 93896
|| | || ||| | | | || ||| |||| | || |||| | |
Sbjct 1619398 ATCGAGCGAGTCTTGGAGACATACAATCTGATGTCTAGCAAGTTCTTCACGCATG-CTTC 1619340
Query 93897 CCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGATGAC 93956
||| || || ||||| || || ||||| ||| || |||| || || ||| || |
Sbjct 1619339 CCCCACGCTCTTCAATGCCGGCACCCCTCAGCCCCAATTGTCATCTTGCTTCTTGGTTGA 1619280
Query 93957 GAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATCTC 94016
| |||| |||| || ||||| | ||| | |||||| |||||| | |||||
Sbjct 1619279 TATGAAGGACGACAGTATTGAGGGAATCTACGATACTCTCAAGACCTGTGCCATGATCTC 1619220
Query 94017 AAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTA--CGTGCCAGGGGTTCCTAC 94074
|| || || || || || | | ||| ||| |||| ||||| | || || |||
Sbjct 1619219 CAAGATGGCTGGTGGTATTGGTCTAAATGTGCAC--CGTATTCGTGCTACTGGCTCATAC 1619162
Query 94075 ATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAAC 94134
||| ||||||||| || || || || || | || |||||||| || ||||||||||||
Sbjct 1619161 ATCGCCGGTACCAACGGTACATCGAATGGTGTTGTTCCTATGCTTCGTGTCTTCAACAAC 1619102
Query 94135 GCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTC 94194
| || || || || ||||||||||| | | | ||| |||| || |||| |||
Sbjct 1619101 ACTGCTCGGTATGTCGACCAGGGTGGCAACAAGCGACCCGGTGCTTTTGCCATCTACCTC 1619042
Query 94195 GAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGAT 94254
||||| |||||| | || || | |||| | || || || ||||||||||| || ||
Sbjct 1619041 GAGCCTTGGCACTCTGATGTCTTCGATTTCCTTGATCTCCGTAAGAACCACGGTAAGGAG 1618982
Query 94255 CTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGC 94314
|| | ||| | || || ||| ||| || ||| | || || ||||| ||||| ||
Sbjct 1618981 GAGGTCCGTGCCCGTGATCTTTTCCTCGCCCTTTGGATCCCTGATCTTTTCATGAAGCGT 1618922
Query 94315 GTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCGAC 94374
|| || || ||| | ||||| || | |||||||| || || || || || |||||
Sbjct 1618921 GTTGAAAAGAACGGTGACTGGACACTGATGTGTCCCAACGAGTGCCCTGGCCTCGCCGAC 1618862
Query 94375 GTTTGTGGATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGGCAAGGCCAGG 94434
| ||| | || || | |||| | ||||| | ||||||||| |
Sbjct 1618861 TGCTACGGAGAGGAGTTCGAGGCTCTGTACGAAAAGTACGAGAAGGAGGGCAAGGGTCGC 1618802
Query 94435 AAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGACGGGT 94494
||| || | ||| |||||| ||| | || | || | ||| ||||| ||
Sbjct 1618801 AAGACAATCAAGGCTCAGAAGCTTTGGTACGCCATTCTCGAGGCCCAGACTGAGACCGGA 1618742
Query 94495 ACGCCCTACATCTTGTTCAAGGA-CTCTGTCAACGCCAAGTCCAACCAGCAGCACCTCGG 94553
| || | ||| | | |||||| |||| ||| |||| |||||| || |||||||
Sbjct 1618741 AACCCATTCATGCTCTACAAGGATGCCTGT-AACCGCAAGAGCAACCAAAAGAACCTCGG 1618683
Query 94554 GGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACGAGAT 94613
||| ||||| || || ||||| || ||| ||||||| | |||| |||||| |
Sbjct 1618682 TACCATCCGAAGCTCCAACCTTTGCACTGAAATTATCGAGTACTGTGCTCCTGACGAGGT 1618623
Query 94614 TGCTGTGTGTAACCTGGGCTCCATCAACCTGTCCACTTTCGTGCGAGATGCCTACACGTC 94673
||||| || ||||| | ||| | ||| || | ||| | | | ||||
Sbjct 1618622 CGCTGTCTGCAACCTTGCCTCTCTGTCTCTGCCCTCCTTCAT-CAA-----CTAC---GA 1618572
Query 94674 TACTGCTTCGTTCGATCTGGAGGAGCTTGTGAACTTCGCGGGAAGGATGGTCTT--GAAC 94731
| |||| | ||| | || || | || | | | ||| || | || |||
Sbjct 1618571 TGAAGCTTGCTACGACTTCAAGAAGTTGCACAAGGT--CAGTCAGGTTGTTATTCGCAAC 1618514
Query 94732 CTGAACAGGGTAATCGACAAGAACTTCTACCCCGTCCCGGAGGCGGAGAACTCAAACCTG 94791
|||||| | | ||||| |||| |||||| |||| |||||| ||| ||| ||
Sbjct 1618513 TTGAACAAGATCATCGATGTGAACCACTACCCTGTCCAGGAGGCTCGCAACAGTAACATG 1618454
Query 94792 AAGCATCGGCCCATCGGCATCGGCGTCCAGGGTTTCGCGGACGCGCTGGTGATGATGCGT 94851
|| || ||||| || | || || ||||| |||| || || | | |||||
Sbjct 1618453 CGCCACCGACCCATTGGTCTGGGTGTTCAGGGCCTCGCCGATGCTTTCCTTGCTCTGCGT 1618394
Query 94852 CTGCCCTACGACTCTGTCGACGCGGCGGGTTTGAATTTGAACATATTCGAAAGCATTTAT 94911
|||||| ||| || ||| || | | || | | || ||||| | |||||||
Sbjct 1618393 ATGCCCTTCGAGTCACCCGAGGCTCGTGAGCTCAACAAGCAGATCTTCGAGACCATTTAT 1618334
Query 94912 TACGGGGCCATGAAACAATCCGTCCACTTGGCCAGATCGGACGGCGGGCCACACGAATCG 94971
||| ||| | | ||||| || |||| | ||| | || || || |
Sbjct 1618333 CACGCTGCCCTCACTGCCTCCGTGCAGCTGGCTA---AGGAGGAGGGTCCCTACTCCACC 1618277
Query 94972 TTCCGCGGATCGCCCTTGGAACAGGGCATTTTTCAGTTCGACCTCTGGGGTGTGAAGCCC 95031
||| || || ||| |||| || | ||||| ||| | ||| || || |||
Sbjct 1618276 TTCAAGGGTTCCCCCGCCTCTGAGGGTATCCTCCAGTTTGACATGTGGAACGTCAAACCC 1618217
Query 95032 TCGGGTCTGTACGACTGGGAAGCTCTACGCGCTGATGTTATCAAACACGGTGTGAAAAAC 95091
|| | || | |||||||| |||| || | || || | | |||||| | |||
Sbjct 1618216 TCTGACCTCTGGGACTGGGAGACTCTTCGAGAGGAAGTCAAGACACACGGCATCCGTAAC 1618157
Query 95092 GCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATCCTTGGCAACAACGAG 95151
||||| | || || ||||| || ||| || | ||||| || || |||||||||
Sbjct 1618156 AGTCTGCTCCTTGCTCCTATGCCTACTGCCAGTACCTCCCAGATTCTGGGTAACAACGAG 1618097
Query 95152 TCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTCGCCGGGGAATTCCCC 95211
| ||||| |||| ||||||||| | ||| | | || || ||||| || || ||||
Sbjct 1618096 TGCTTCGAGCCCTACACCTCCAATATCTACCAACGCCGTGTTCTCGCTGGTGAGTTCCAG 1618037
Query 95212 GTCATCAACAAGCACCTCCTACGGGACC-TGACGTCTCTGGGTGTGTGGGGTGACAAGGT 95270
|| ||||| || || ||||| || || | ||||| ||||| || |
Sbjct 1618036 GTTGTCAACCCCTGGCTGCTCAAGGACCTTGTCGAC-ATGGGTCTGTGGTCCGATGCTAT 1617978
Query 95271 CAAGAACC----AACTGCTACGCGCCAACGGCTCCGTCCAGAACATCCCGCAAATACCGG 95326
||||||| | |||| | || || ||| | |||||||| || | || || |
Sbjct 1617977 GAAGAACCGCATCATTGCT----GAGAATGGTTCCATTCAGAACATTCCCAACATCCCTG 1617922
Query 95327 AGGACATCAAGGCGCTCTACAAGACCGTGTGGGAGATCCCGCAGCGC 95373
||| ||||||| || |||||||| || ||||||||| | ||||||
Sbjct 1617921 CCGACGTCAAGGCTCTGTACAAGACTGTCTGGGAGATCTCTCAGCGC 1617875
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 494722253841880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |