Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20pininemorale_20[genbank_20GCA_5F002165215.1_202017-06-02] 153 sequences; 47,778,485 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq5 219 4e-52 >seq5 Length=2590615 Score = 219 bits (242), Expect = 4e-52 Identities = 1058/1667 (63%), Gaps = 34/1667 (2%) Strand=Plus/Minus Query 93718 TACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGCAGG 93777 ||| | ||||||| |||||| ||| ||||| || |||||||||||||| || || | | Sbjct 1619518 TACCAATACTTTGGCTTCAAGACTTTGGAGCGATCATACCTCCTCAAGATTGACGGTAAG 1619459 Query 93778 GTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCACGAC 93837 || |||||| || || || || | ||||| || | | || || || | || Sbjct 1619458 ATTGTCGAGCGCCCTCAGCACATGATCATGCGTGTGTCTGTTGGTATCTGGGGTGATGAT 1619399 Query 93838 ATGCCGAATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATAC-CATGGCCAC 93896 || | || ||| | | | || ||| |||| | || |||| | | Sbjct 1619398 ATCGAGCGAGTCTTGGAGACATACAATCTGATGTCTAGCAAGTTCTTCACGCATG-CTTC 1619340 Query 93897 CCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGATGAC 93956 ||| || || ||||| || || ||||| ||| || |||| || || ||| || | Sbjct 1619339 CCCCACGCTCTTCAATGCCGGCACCCCTCAGCCCCAATTGTCATCTTGCTTCTTGGTTGA 1619280 Query 93957 GAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATCTC 94016 | |||| |||| || ||||| | ||| | |||||| |||||| | ||||| Sbjct 1619279 TATGAAGGACGACAGTATTGAGGGAATCTACGATACTCTCAAGACCTGTGCCATGATCTC 1619220 Query 94017 AAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTA--CGTGCCAGGGGTTCCTAC 94074 || || || || || || | | ||| ||| |||| ||||| | || || ||| Sbjct 1619219 CAAGATGGCTGGTGGTATTGGTCTAAATGTGCAC--CGTATTCGTGCTACTGGCTCATAC 1619162 Query 94075 ATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAAC 94134 ||| ||||||||| || || || || || | || |||||||| || |||||||||||| Sbjct 1619161 ATCGCCGGTACCAACGGTACATCGAATGGTGTTGTTCCTATGCTTCGTGTCTTCAACAAC 1619102 Query 94135 GCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTC 94194 | || || || || ||||||||||| | | | ||| |||| || |||| ||| Sbjct 1619101 ACTGCTCGGTATGTCGACCAGGGTGGCAACAAGCGACCCGGTGCTTTTGCCATCTACCTC 1619042 Query 94195 GAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGAT 94254 ||||| |||||| | || || | |||| | || || || ||||||||||| || || Sbjct 1619041 GAGCCTTGGCACTCTGATGTCTTCGATTTCCTTGATCTCCGTAAGAACCACGGTAAGGAG 1618982 Query 94255 CTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGC 94314 || | ||| | || || ||| ||| || ||| | || || ||||| ||||| || Sbjct 1618981 GAGGTCCGTGCCCGTGATCTTTTCCTCGCCCTTTGGATCCCTGATCTTTTCATGAAGCGT 1618922 Query 94315 GTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCGAC 94374 || || || ||| | ||||| || | |||||||| || || || || || ||||| Sbjct 1618921 GTTGAAAAGAACGGTGACTGGACACTGATGTGTCCCAACGAGTGCCCTGGCCTCGCCGAC 1618862 Query 94375 GTTTGTGGATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGGCAAGGCCAGG 94434 | ||| | || || | |||| | ||||| | ||||||||| | Sbjct 1618861 TGCTACGGAGAGGAGTTCGAGGCTCTGTACGAAAAGTACGAGAAGGAGGGCAAGGGTCGC 1618802 Query 94435 AAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGACGGGT 94494 ||| || | ||| |||||| ||| | || | || | ||| ||||| || Sbjct 1618801 AAGACAATCAAGGCTCAGAAGCTTTGGTACGCCATTCTCGAGGCCCAGACTGAGACCGGA 1618742 Query 94495 ACGCCCTACATCTTGTTCAAGGA-CTCTGTCAACGCCAAGTCCAACCAGCAGCACCTCGG 94553 | || | ||| | | |||||| |||| ||| |||| |||||| || ||||||| Sbjct 1618741 AACCCATTCATGCTCTACAAGGATGCCTGT-AACCGCAAGAGCAACCAAAAGAACCTCGG 1618683 Query 94554 GGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACGAGAT 94613 ||| ||||| || || ||||| || ||| ||||||| | |||| |||||| | Sbjct 1618682 TACCATCCGAAGCTCCAACCTTTGCACTGAAATTATCGAGTACTGTGCTCCTGACGAGGT 1618623 Query 94614 TGCTGTGTGTAACCTGGGCTCCATCAACCTGTCCACTTTCGTGCGAGATGCCTACACGTC 94673 ||||| || ||||| | ||| | ||| || | ||| | | | |||| Sbjct 1618622 CGCTGTCTGCAACCTTGCCTCTCTGTCTCTGCCCTCCTTCAT-CAA-----CTAC---GA 1618572 Query 94674 TACTGCTTCGTTCGATCTGGAGGAGCTTGTGAACTTCGCGGGAAGGATGGTCTT--GAAC 94731 | |||| | ||| | || || | || | | | ||| || | || ||| Sbjct 1618571 TGAAGCTTGCTACGACTTCAAGAAGTTGCACAAGGT--CAGTCAGGTTGTTATTCGCAAC 1618514 Query 94732 CTGAACAGGGTAATCGACAAGAACTTCTACCCCGTCCCGGAGGCGGAGAACTCAAACCTG 94791 |||||| | | ||||| |||| |||||| |||| |||||| ||| ||| || Sbjct 1618513 TTGAACAAGATCATCGATGTGAACCACTACCCTGTCCAGGAGGCTCGCAACAGTAACATG 1618454 Query 94792 AAGCATCGGCCCATCGGCATCGGCGTCCAGGGTTTCGCGGACGCGCTGGTGATGATGCGT 94851 || || ||||| || | || || ||||| |||| || || | | ||||| Sbjct 1618453 CGCCACCGACCCATTGGTCTGGGTGTTCAGGGCCTCGCCGATGCTTTCCTTGCTCTGCGT 1618394 Query 94852 CTGCCCTACGACTCTGTCGACGCGGCGGGTTTGAATTTGAACATATTCGAAAGCATTTAT 94911 |||||| ||| || ||| || | | || | | || ||||| | ||||||| Sbjct 1618393 ATGCCCTTCGAGTCACCCGAGGCTCGTGAGCTCAACAAGCAGATCTTCGAGACCATTTAT 1618334 Query 94912 TACGGGGCCATGAAACAATCCGTCCACTTGGCCAGATCGGACGGCGGGCCACACGAATCG 94971 ||| ||| | | ||||| || |||| | ||| | || || || | Sbjct 1618333 CACGCTGCCCTCACTGCCTCCGTGCAGCTGGCTA---AGGAGGAGGGTCCCTACTCCACC 1618277 Query 94972 TTCCGCGGATCGCCCTTGGAACAGGGCATTTTTCAGTTCGACCTCTGGGGTGTGAAGCCC 95031 ||| || || ||| |||| || | ||||| ||| | ||| || || ||| Sbjct 1618276 TTCAAGGGTTCCCCCGCCTCTGAGGGTATCCTCCAGTTTGACATGTGGAACGTCAAACCC 1618217 Query 95032 TCGGGTCTGTACGACTGGGAAGCTCTACGCGCTGATGTTATCAAACACGGTGTGAAAAAC 95091 || | || | |||||||| |||| || | || || | | |||||| | ||| Sbjct 1618216 TCTGACCTCTGGGACTGGGAGACTCTTCGAGAGGAAGTCAAGACACACGGCATCCGTAAC 1618157 Query 95092 GCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATCCTTGGCAACAACGAG 95151 ||||| | || || ||||| || ||| || | ||||| || || ||||||||| Sbjct 1618156 AGTCTGCTCCTTGCTCCTATGCCTACTGCCAGTACCTCCCAGATTCTGGGTAACAACGAG 1618097 Query 95152 TCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTCGCCGGGGAATTCCCC 95211 | ||||| |||| ||||||||| | ||| | | || || ||||| || || |||| Sbjct 1618096 TGCTTCGAGCCCTACACCTCCAATATCTACCAACGCCGTGTTCTCGCTGGTGAGTTCCAG 1618037 Query 95212 GTCATCAACAAGCACCTCCTACGGGACC-TGACGTCTCTGGGTGTGTGGGGTGACAAGGT 95270 || ||||| || || ||||| || || | ||||| ||||| || | Sbjct 1618036 GTTGTCAACCCCTGGCTGCTCAAGGACCTTGTCGAC-ATGGGTCTGTGGTCCGATGCTAT 1617978 Query 95271 CAAGAACC----AACTGCTACGCGCCAACGGCTCCGTCCAGAACATCCCGCAAATACCGG 95326 ||||||| | |||| | || || ||| | |||||||| || | || || | Sbjct 1617977 GAAGAACCGCATCATTGCT----GAGAATGGTTCCATTCAGAACATTCCCAACATCCCTG 1617922 Query 95327 AGGACATCAAGGCGCTCTACAAGACCGTGTGGGAGATCCCGCAGCGC 95373 ||| ||||||| || |||||||| || ||||||||| | |||||| Sbjct 1617921 CCGACGTCAAGGCTCTGTACAAGACTGTCTGGGAGATCTCTCAGCGC 1617875 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494722253841880