Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20pininemorale_20[genbank_20GCA_5F002165215.1_202017-06-02]
153 sequences; 47,778,485 total letters
Query= NC_013288.1
Length=191761
Score E
Sequences producing significant alignments: (Bits) Value
seq5 172 7e-38
seq7 167 3e-36
seq2 82.4 9e-11
>seq5
Length=2590615
Score = 172 bits (190), Expect = 7e-38
Identities = 1095/1729 (63%), Gaps = 63/1729 (4%)
Strand=Plus/Plus
Query 115526 TGAACTGAATGGGTCTCGCCTTGGCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCC 115585
|||||||||| || || |||| || || ||||||||||| || |||||||| |
Sbjct 1617691 TGAACTGAATAGGAGCAGCAGCAGCCTGTGTACGAAGGTAGTACATGCCGGTCTTGAGGC 1617750
Query 115586 CCTGCTTCCAGGCATACATA-TGCATTGAGGACAACTTGGAGAGTGTTGGACTTTCCATG 115644
| | |||||| | | || | ||||| || | |||| | || || | ||||
Sbjct 1617751 CAAGTTTCCAGCC-TGCAAAGTGCATGCTGGTGATCTTGCCCATCGTGGGGTCCTTCATG 1617809
Query 115645 AAGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCCCGATCCGCCGCCATATCAATC 115704
|| ||||| ||||| ||||| |||||| || ||||| || ||||| | ||
Sbjct 1617810 TGGATGTTCAGTGACTGGGACTGATCAATGAAGGCACCTCGATCAGCAGCCATCTGAACG 1617869
Query 115705 ACATCCTTCATCTTGATTTCCCACACAGTTCTGTAGAGGTTCTTAATATCATCTGGGATA 115764
|| | | ||| ||||| ||||| |||| || ||| | || | |||||
Sbjct 1617870 ACCTGGCGCTGAGAGATCTCCCAGACAGTCTTGTACAGAGCCTTGACGTCGGCAGGGATG 1617929
Query 115765 TCCACGATATTTTGGATAGAGCCAC---CTGCCTTGACCATGAGATCCTTCATATCCTTT 115821
| || || || || || ||| | || ||| || | | ||||||| | |
Sbjct 1617930 TTGGGAATGTTCTGAATGGAACCATTCTCAGCAATGA---TGCGGTTCTTCATAGCATCG 1617986
Query 115822 GACCAGAGACCAATCTTCTTGAGATCCTCCA----CGAGGTGCTTATTGACAACAACAAA 115877
||||| ||||| || | || |||| | | ||| | |||||||| ||
Sbjct 1617987 GACCACAGACCCATGTCGACAAGGTCCTTGAGCAGCCAGGGG----TTGACAACCTGGAA 1618042
Query 115878 CTCACCCGCGAGGGTGCGTCTCAGATAGATGTTGGTCGTGTATGGCTCAAAGCACTCATT 115937
|||||| ||||| || | | ||||| |||| ||||| ||||| |||||||| ||
Sbjct 1618043 CTCACCAGCGAGAACACGGCGTTGGTAGATATTGGAGGTGTAGGGCTCGAAGCACTCGTT 1618102
Query 115938 GTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTGCG 115997
|||||||| || |||| || ||| || ||||| || || | ||| || ||||| ||
Sbjct 1618103 GTTACCCAGAATCTGGGAGGTACTGGCAGTAGGCATAGGAGCAAGGAGCAGACTGTTACG 1618162
Query 115998 GAGACCCACCCCCCTAATGCGTTC-CTTGAGG-GCGTCCCAGTCGTAGTTGAGCTTTGTC 116055
|| || | | | | | | || || | | |||||||| || | |
Sbjct 1618163 GATGCCGTGTGTCTTGA--CTTCCTCTCGAAGAGTCTCCCAGTCCCAGAGGTCAGAGGGT 1618220
Query 116056 TCCCCCTCCCACATATCAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTC 116115
| | | |||||| ||||||||||||||||| | || || || || |||| || ||
Sbjct 1618221 TTGACGTTCCACATGTCAAACTGGAGGATACCCTCAGAGGCGGGGGAACCCTTGAAGGTG 1618280
Query 116116 TCATATGGGCCCTCAACCTCCGCCAATT---CGGAGCTCGCCTCGAGGGCTGCGTGATAC 116172
|| || ||||| ||| |||| | ||||| || |||||| ||||||||
Sbjct 1618281 GAGTAGGGACCCTCCTCCTTAGCCAGCTGCACGGAG---GCAGTGAGGGCAGCGTGATAA 1618337
Query 116173 ATTGTCTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGACGG 116232
|| ||||| || || | || | | |||||| || || || | | |||
Sbjct 1618338 ATGGTCTCGAAGATCTGCTTGTTGAGCTCACGAGCCTCGGGTGACTCGAAGGGCATACG- 1618396
Query 116233 CACAA-AATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCAT 116291
|| | || || |||| ||||| || || ||||| || ||||| || || || | |||
Sbjct 1618397 CAGAGCAAGGAAAGCATCGGCGAGGCCCTGAACACCCAGACCAATGGGTCGGTGGCGCAT 1618456
Query 116292 ATTAGACTTTCGAGCGGTCTCCACGGGATAAAAATTCCTATCGATAACCCTATTTAGATT 116351
||| || ||||| || || || || ||| |||||| | | | || | ||
Sbjct 1618457 GTTACTGTTGCGAGCCTCCTGGACAGGGTAGTGGTTCACATCGATGATCTTGTTCAAGTT 1618516
Query 116352 TTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTC 116411
| ||||||| ||| | || | ||| | | | || | || || ||||
Sbjct 1618517 GCGAATAACAACCTGACTGACCTTGTGCAACTTCTTGAAGTCGTA---GCAAG---CTTC 1618570
Query 116412 ATTG-ACATACTTAGGAAGGGCG-----ATTGACGCCAGATTACACACAGAGGTCTCATC 116465
|| | | | | | | ||||| | || || || || || |||| | ||| ||
Sbjct 1618571 ATCGTAGTTGATGAAGGAGGGCAGAGACAGAGAGGCAAGGTTGCAGACAGCGACCTCGTC 1618630
Query 116466 CTTATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTT 116525
| || |||||| |||||||| || || | || || || ||||| || | |||
Sbjct 1618631 AGGAGCACAGTACTCGATAATTTCAGTGCAAAGGTTGGAGCTTCGGATGGTACCGAGGTT 1618690
Query 116526 CTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAGAGCATATATGGCGTCCCCGTCTC 116585
|||||| || ||| |||||| ||||||||||||||||| |||| | || |||||
Sbjct 1618691 CTTTTGGTTGCTCTTGCGGTTACAGGCATCCTTGTAGAGCATGAATGGGTTTCCGGTCTC 1618750
Query 116586 CGTTTGGGACTTGAGAATAGCCTTCCATA-CATCGGCGGCTGGCACAGTGGCGTTGG--- 116641
|| |||| || |||||| || | ||| | | || | | || | | || | | |
Sbjct 1618751 AGTCTGGGCCTCGAGAATGGCGTACCAAAGCTTCTGAGCCTTG---ATTGTCTTGCGACC 1618807
Query 116642 CTCGCCCCTCCTCCTCGTACTTTGTGTAGAGGGCCTCAAACTCTTCACCCACAGC-CTCT 116700
|| | ||||||| |||||||||| ||| || ||||| ||||| || || ||| ||
Sbjct 1618808 CTTG-CCCTCCTTCTCGTACTTTTCGTACAGAGCCTCGAACTCCTC-TCCGTAGCAGTCG 1618865
Query 116701 GAGAGCCCTGGTGCCTTATCTGGACAGAAGAGAGACCATTGACCACCCTCCTCAACCCGC 116760
| ||| || || || | ||||| | || | ||| | ||| || ||||| |||
Sbjct 1618866 GCGAGGCCAGGGCACTCGTTGGGACACATCAGTGTCCAGTCACCGTTCTTTTCAACACGC 1618925
Query 116761 TTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCA 116820
|||||||| || || |||||||| || || ||| ||||| || || | || ||
Sbjct 1618926 TTCATGAAAAGATCAGGGATCCAAAGGGCGAGGAAAAGATCACGGGCACGGACCTCCTCC 1618985
Query 116821 TCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGG 116880
| || || || ||| | || | || || | || ||| | |||||| || || |||
Sbjct 1618986 TTACCGTGGTTCTTACGGAGATCAAGGAAATCGAAGACATCAGAGTGCCAAGGCTCGAGG 1619045
Query 116881 TACACCGCGATTG-ACC-CCTTGC--GACGACCAGCCTGGTTTACATACCTCGCCGTTGC 116936
|| | || | | ||| | || | | ||| |||||| ||||||| || ||
Sbjct 1619046 TAGATGGCAAAAGCACCGGGTCGCTTGTTG-CCACCCTGGTCGACATACCGAGCAGTGTT 1619104
Query 116937 GTTAAATACGCGAAGCATTGGAATGATACCATCAGATTGGCCATTTGT-CCCCCGA-ATA 116994
||| || || |||||||| |||| | ||||| ||| || || || || ||| ||
Sbjct 1619105 GTTGAAGACACGAAGCATAGGAACAACACCATTCGATGTACCGTTGGTACCGGCGATGTA 1619164
Query 116995 CGAGACTTGTTGGCTCTGACATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAG 117054
||| | | || | | | ||| | | | ||||||||| || ||| ||| |||
Sbjct 1619165 TGAGCC--AGTAGCACGAATACGGTGCACATTTAGACCAATACCACCAGCCATCTTGGAG 1619222
Query 117055 ATTTGTGCGCACTCCGTGAGACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCG 117114
|| || || | ||||| | ||||||| || || || ||| |||| | |
Sbjct 1619223 ATCATGGCACAGGTCTTGAGAGTATCGTAGATTCCCTCAATACTGTCGTCCTTCATATCA 1619282
Query 117115 ATGAGGAAGCAGCTCGACATTTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTC 117174
| | |||||| |||| ||| ||| || || || || |||||||| || || |
Sbjct 1619283 ACCAAGAAGCAAGATGACAATTGGGGCTGAGGGGTGCCGGCATTGAAGAGCGTGGGGGAA 1619342
Query 117175 GCGTGGATGAACATACCTTG--GGACATCTTATCGTAGGTCTCCAAGAC 117221
|| || ||| | | |||| |||||| || ||| |||||||||||
Sbjct 1619343 GCATGCGTGA--AGAACTTGCTAGACATCAGATTGTATGTCTCCAAGAC 1619389
>seq7
Length=1585612
Score = 167 bits (184), Expect = 3e-36
Identities = 314/459 (68%), Gaps = 16/459 (3%)
Strand=Plus/Minus
Query 127231 GTAGTCCCCGACCCGCTTCTCGAAGAAGTTTGTCTTCCCATCGAGGCTGATATTCTCCAT 127290
|||||| | || ||||||||||||||||| ||||| ||| | ||| ||| ||||||||
Sbjct 1401435 GTAGTCGGCAACACGCTTCTCGAAGAAGTTGGTCTTGCCACCAAGGGAGATGTTCTCCAT 1401376
Query 127291 AAAATCAAATGGGTTCTTTGAGTTCCAAA-----TTGTTGGCACCCCAATCTGTTTGAGG 127345
||| || || ||||| | | || | | | |||| |||| |||
Sbjct 1401375 AAAGTCGAAGGGGTTGGTGGCCTTGTAGACCTTCTCGTTG-----CCAAGAGCGACAAGG 1401321
Query 127346 AGACGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAGG 127405
|||||||| | |||| |||||||||||| ||| ||||||||||| |||| ||||
Sbjct 1401320 AGACGATCAGCGACGAACTCAATGTACTGCTTCATGAGGTCAGAGTTCATGCCGAGGAGG 1401261
Query 127406 TTACATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGTACGATG 127465
||| || || || || || |||| ||| ||||||| || || || | |||
Sbjct 1401260 GCACAGGGAAGAGCTTCGGTGAGGAACTCCTGCTCAATGGTGACGGCATCAGTGATGATA 1401201
Query 127466 GCGTGAATAGTGTCCACCC---CAGGTCTATTGCGTAAAGTCTTGAAGAGTTCCACAGCA 127522
| || || | | | | || | | ||| | || | || ||| || |||
Sbjct 1401200 TCCTGGATCATCTGCTTACTGGCACGACCCTTGAGGTGAGAGTGGAGGAGG--CAT-GCA 1401144
Query 127523 AACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGC 127582
|| || ||| |||||||||||||| |||||||| || || ||||| |||||| |||
Sbjct 1401143 AAGTCAGTGTGAAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAAGTCAGACCAGGC 1401084
Query 127583 ATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCC 127642
|||||||| |||||||| | |||||| || | || | ||| ||||||||| |||
Sbjct 1401083 ATGAGACCACGCTTCTTGAGCCAGAAGATAGAGGCGAAGGCACCACTGAAGAAGATACCC 1401024
Query 127643 TCCACACACGCGAACGCAAATAGACGCTCGGCAAAGGAG 127681
|| ||| || || |||| ||||||| ||||||||||
Sbjct 1401023 TCAACAGCAGCAAAGGCAACGAGACGCTGGGCAAAGGAG 1400985
>seq2
Length=4950538
Score = 82.4 bits (90), Expect = 9e-11
Identities = 90/120 (75%), Gaps = 0/120 (0%)
Strand=Plus/Minus
Query 177742 CAACTTGGCACCGTAGCCATTGCGTCCACCAACAATTCTCTTCTTGTTGTCATCGTAGTT 177801
|| |||||||||||| || ||||| |||||||| || |||||| || ||| ||| ||||
Sbjct 3137822 CAGCTTGGCACCGTAACCGTTGCGACCACCAACGGTTTTCTTCTCGTCGTCGTCGAAGTT 3137763
Query 177802 TGTACTCGTGAGAAGGTGACCAAAGGTAAGTTCTGGATTCCAAATACCCTCCTTTTCGTG 177861
| || || | || || |||||| |||| || ||| | | || ||||||||||||
Sbjct 3137762 GGAACCCGCCAACAGATGTCCAAAGATAAGCTCGGGAATGTAGATCTTCTCCTTTTCGTG 3137703
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 613506026667480
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