Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20pininemorale_20[genbank_20GCA_5F002165215.1_202017-06-02] 153 sequences; 47,778,485 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq7 167 4e-36 >seq7 Length=1585612 Score = 167 bits (184), Expect = 4e-36 Identities = 364/539 (68%), Gaps = 7/539 (1%) Strand=Plus/Minus Query 159628 CTTCTTGTATTGCGACACATTCTTCTCGAAAAAGTTGGTCTTGCCCTCCATGGATATTGA 159687 ||||| ||| | | ||| ||||||||| |||||||||||||| | | ||| || Sbjct 1401441 CTTCTGGTAGTCGGCAACACGCTTCTCGAAGAAGTTGGTCTTGCCACCAAGGGAGATGTT 1401382 Query 159688 TTCCATGAACCCGAATGGGTTCTTCACGTGATAGCGCTTCGGAAATCCGAGAGCCGCCAG 159747 ||||| || |||| ||||| | | | ||| |||| || ||||| | || Sbjct 1401381 CTCCATAAAGTCGAAGGGGTTGGTGGCCTTGTAGACCTTCTCGTTGCCAAGAGCGACAAG 1401322 Query 159748 CAACCTGTCTGCCACAAATTCGATGTAGCTACA-CATCTGCTCACAGTTGATCCCCAGCA 159806 | | || || || || || ||||| || | ||| | ||| |||| || || || | Sbjct 1401321 GAGACGATCAGCGACGAACTCAATGTA-CTGCTTCATGAGGTCAGAGTTCATGCCGAGGA 1401263 Query 159807 GCCTAACGGGGAGCGCTTCCGACAGAAACTCCTTCTCAATCTCGACCGCTTCGGTCACAA 159866 | | ||| || ||||| | || ||||||| |||||| ||| || || || | | Sbjct 1401262 GGGCACAGGGAAGAGCTTCGGTGAGGAACTCCTGCTCAATGGTGACGGCATCAGTGATGA 1401203 Query 159867 TCTGCGAGA-CACGTTCGTACCCCGGCTTGCCCAAAATGTGGTCCTTAAACAGGAGGCAC 159925 | | | || || | | ||| ||| | || || ||| |||||||| Sbjct 1401202 TATCCTGGATCATCTGCTTACT--GGCACGACCCT--TGAGGTGAGAGTGGAGGAGGCAT 1401147 Query 159926 GCAAAGTCGCAGTGCAGTCCCTCGTCCCGAGAGATGAACTCGTTGGACATGATGAGGCCC 159985 |||||||| ||| || |||||||| |||||||||| ||||||||| | | || || Sbjct 1401146 GCAAAGTCAGTGTGAAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAAGTCAGACCA 1401087 Query 159986 GGCATGATCCCACGCGGTTTGAGCCAAAAAATGGCCGCAAAAGCACCGCTAAAAAAGATC 160045 ||||||| |||||| |||||||| || || | || || ||||| || || ||||| Sbjct 1401086 GGCATGAGACCACGCTTCTTGAGCCAGAAGATAGAGGCGAAGGCACCACTGAAGAAGATA 1401027 Query 160046 CCCTCCACGGCCGCAAACGCCACGAGCCTCTCACCAAAAGAGGCGTTGGTGTCATGGGTC 160105 ||||| || || ||||| || ||||| | || |||| |||| || | || ||| || Sbjct 1401026 CCCTCAACAGCAGCAAAGGCAACGAGACGCTGGGCAAAGGAGGAGTCCTTATCCTGGATC 1400967 Query 160106 CACCTTTTGGCCCATTCAGCCTTCTTTGCGATGCACGGCATGCGCTCGACGGCGTTAAA 160164 || | ||||||| |||||||||||| |||||| || ||| ||| | |||||| || Sbjct 1400966 CATCGGATGGCCCAGTCAGCCTTCTTTCGGATGCAGGGAATGGTCTCAATGGCGTTGAA 1400908 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795153679265680