Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20pininemorale_20[genbank_20GCA_5F002165215.1_202017-06-02]
153 sequences; 47,778,485 total letters
Query= NC_013668.3
Length=248526
Score E
Sequences producing significant alignments: (Bits) Value
seq7 167 4e-36
>seq7
Length=1585612
Score = 167 bits (184), Expect = 4e-36
Identities = 364/539 (68%), Gaps = 7/539 (1%)
Strand=Plus/Minus
Query 159628 CTTCTTGTATTGCGACACATTCTTCTCGAAAAAGTTGGTCTTGCCCTCCATGGATATTGA 159687
||||| ||| | | ||| ||||||||| |||||||||||||| | | ||| ||
Sbjct 1401441 CTTCTGGTAGTCGGCAACACGCTTCTCGAAGAAGTTGGTCTTGCCACCAAGGGAGATGTT 1401382
Query 159688 TTCCATGAACCCGAATGGGTTCTTCACGTGATAGCGCTTCGGAAATCCGAGAGCCGCCAG 159747
||||| || |||| ||||| | | | ||| |||| || ||||| | ||
Sbjct 1401381 CTCCATAAAGTCGAAGGGGTTGGTGGCCTTGTAGACCTTCTCGTTGCCAAGAGCGACAAG 1401322
Query 159748 CAACCTGTCTGCCACAAATTCGATGTAGCTACA-CATCTGCTCACAGTTGATCCCCAGCA 159806
| | || || || || || ||||| || | ||| | ||| |||| || || || |
Sbjct 1401321 GAGACGATCAGCGACGAACTCAATGTA-CTGCTTCATGAGGTCAGAGTTCATGCCGAGGA 1401263
Query 159807 GCCTAACGGGGAGCGCTTCCGACAGAAACTCCTTCTCAATCTCGACCGCTTCGGTCACAA 159866
| | ||| || ||||| | || ||||||| |||||| ||| || || || | |
Sbjct 1401262 GGGCACAGGGAAGAGCTTCGGTGAGGAACTCCTGCTCAATGGTGACGGCATCAGTGATGA 1401203
Query 159867 TCTGCGAGA-CACGTTCGTACCCCGGCTTGCCCAAAATGTGGTCCTTAAACAGGAGGCAC 159925
| | | || || | | ||| ||| | || || ||| ||||||||
Sbjct 1401202 TATCCTGGATCATCTGCTTACT--GGCACGACCCT--TGAGGTGAGAGTGGAGGAGGCAT 1401147
Query 159926 GCAAAGTCGCAGTGCAGTCCCTCGTCCCGAGAGATGAACTCGTTGGACATGATGAGGCCC 159985
|||||||| ||| || |||||||| |||||||||| ||||||||| | | || ||
Sbjct 1401146 GCAAAGTCAGTGTGAAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAAGTCAGACCA 1401087
Query 159986 GGCATGATCCCACGCGGTTTGAGCCAAAAAATGGCCGCAAAAGCACCGCTAAAAAAGATC 160045
||||||| |||||| |||||||| || || | || || ||||| || || |||||
Sbjct 1401086 GGCATGAGACCACGCTTCTTGAGCCAGAAGATAGAGGCGAAGGCACCACTGAAGAAGATA 1401027
Query 160046 CCCTCCACGGCCGCAAACGCCACGAGCCTCTCACCAAAAGAGGCGTTGGTGTCATGGGTC 160105
||||| || || ||||| || ||||| | || |||| |||| || | || ||| ||
Sbjct 1401026 CCCTCAACAGCAGCAAAGGCAACGAGACGCTGGGCAAAGGAGGAGTCCTTATCCTGGATC 1400967
Query 160106 CACCTTTTGGCCCATTCAGCCTTCTTTGCGATGCACGGCATGCGCTCGACGGCGTTAAA 160164
|| | ||||||| |||||||||||| |||||| || ||| ||| | |||||| ||
Sbjct 1400966 CATCGGATGGCCCAGTCAGCCTTCTTTCGGATGCAGGGAATGGTCTCAATGGCGTTGAA 1400908
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 795153679265680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |