Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20pininemorale_20[genbank_20GCA_5F002165215.1_202017-06-02] 153 sequences; 47,778,485 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq1 104 2e-16 >seq1 Length=6144005 Score = 104 bits (114), Expect = 2e-16 Identities = 197/290 (68%), Gaps = 0/290 (0%) Strand=Plus/Plus Query 518015 ACAAGACGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACT 518074 || ||||| || || || || ||||| ||||| | ||| | || | |||| | || Sbjct 3800618 ACCAGACGGTTGTCGAAGTCCTCACCACCCAAGTGAGTGTCACCGGCGGTAGACTTGACC 3800677 Query 518075 TGGAAAAGTCCATCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCA 518134 | ||| | || || |||| | | |||| ||||| ||| |||||||| | ||| Sbjct 3800678 TCGAAGATACCCTCCTCAATGGTAAGGAGAGACACATCGAAGGTACCACCACCAAGATCG 3800737 Query 518135 AAAATAAGTACATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCA 518194 || || || || || || || || || |||||||| || |||| |||||| Sbjct 3800738 AAGATCAGGACGTTGCGCTCGCCCTCAACCTTCTTGTCAAGACCGTAGGCAATGGCAGCA 3800797 Query 518195 GCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTA 518254 ||||| || || || || |||| | ||| |||||||| || || || ||||| || Sbjct 3800798 GCAGTAGGCTCGTTGATGATTCGGAGAACGTTAAGACCGGCGATGAGACCAGCATCCTTG 3800857 Query 518255 GTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGC 518304 |||||||| | || || ||||| || || ||||| ||||| | ||| || Sbjct 3800858 GTGGCTTGACGCTGAGAGTCGTTGAAGTAGGCAGGGACAGTCACAACAGC 3800907 Score = 95.1 bits (104), Expect = 9e-14 Identities = 94/122 (77%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 668855 GGTAAAGAAGGTCGTATTAGAGGAAATTTGATGGGAAAACGTGTCGATATGTCTGCACGT 668914 ||||| || |||||| || |||| || |||||||| || |||||||| | || || ||| Sbjct 3939513 GGTAAGGAGGGTCGTCTTCGAGGTAACTTGATGGGTAAGCGTGTCGACTTTTCGGCTCGT 3939454 Query 668915 ACAGTTATTACTTCTGATCCCAATATTGCTCTCAATGAAGTTGGTGTTCCTCTTATTATT 668974 || || |||||| |||| |||| || |||| | || ||||||||||||| | |||| Sbjct 3939453 ACTGTCATTACTGGTGATGCCAACCTTTCTCTACACGAGGTTGGTGTTCCTCGCAGTATT 3939394 Query 668975 GC 668976 || Sbjct 3939393 GC 3939392 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3780814807636018