Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20pininemorale_20[genbank_20GCA_5F002165215.1_202017-06-02]
153 sequences; 47,778,485 total letters
Query= NC_014649.1
Length=1181549
Score E
Sequences producing significant alignments: (Bits) Value
seq1 104 2e-16
>seq1
Length=6144005
Score = 104 bits (114), Expect = 2e-16
Identities = 197/290 (68%), Gaps = 0/290 (0%)
Strand=Plus/Plus
Query 518015 ACAAGACGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACT 518074
|| ||||| || || || || ||||| ||||| | ||| | || | |||| | ||
Sbjct 3800618 ACCAGACGGTTGTCGAAGTCCTCACCACCCAAGTGAGTGTCACCGGCGGTAGACTTGACC 3800677
Query 518075 TGGAAAAGTCCATCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCA 518134
| ||| | || || |||| | | |||| ||||| ||| |||||||| | |||
Sbjct 3800678 TCGAAGATACCCTCCTCAATGGTAAGGAGAGACACATCGAAGGTACCACCACCAAGATCG 3800737
Query 518135 AAAATAAGTACATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCA 518194
|| || || || || || || || || |||||||| || |||| ||||||
Sbjct 3800738 AAGATCAGGACGTTGCGCTCGCCCTCAACCTTCTTGTCAAGACCGTAGGCAATGGCAGCA 3800797
Query 518195 GCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTA 518254
||||| || || || || |||| | ||| |||||||| || || || ||||| ||
Sbjct 3800798 GCAGTAGGCTCGTTGATGATTCGGAGAACGTTAAGACCGGCGATGAGACCAGCATCCTTG 3800857
Query 518255 GTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGC 518304
|||||||| | || || ||||| || || ||||| ||||| | ||| ||
Sbjct 3800858 GTGGCTTGACGCTGAGAGTCGTTGAAGTAGGCAGGGACAGTCACAACAGC 3800907
Score = 95.1 bits (104), Expect = 9e-14
Identities = 94/122 (77%), Gaps = 0/122 (0%)
Strand=Plus/Minus
Query 668855 GGTAAAGAAGGTCGTATTAGAGGAAATTTGATGGGAAAACGTGTCGATATGTCTGCACGT 668914
||||| || |||||| || |||| || |||||||| || |||||||| | || || |||
Sbjct 3939513 GGTAAGGAGGGTCGTCTTCGAGGTAACTTGATGGGTAAGCGTGTCGACTTTTCGGCTCGT 3939454
Query 668915 ACAGTTATTACTTCTGATCCCAATATTGCTCTCAATGAAGTTGGTGTTCCTCTTATTATT 668974
|| || |||||| |||| |||| || |||| | || ||||||||||||| | ||||
Sbjct 3939453 ACTGTCATTACTGGTGATGCCAACCTTTCTCTACACGAGGTTGGTGTTCCTCGCAGTATT 3939394
Query 668975 GC 668976
||
Sbjct 3939393 GC 3939392
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3780814807636018
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |