Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20pininemorale_20[genbank_20GCA_5F002165215.1_202017-06-02]
153 sequences; 47,778,485 total letters
Query= NC_014766.1
Length=194022
Score E
Sequences producing significant alignments: (Bits) Value
seq7 154 2e-32
seq1 105 8e-18
>seq7
Length=1585612
Score = 154 bits (170), Expect = 2e-32
Identities = 354/522 (68%), Gaps = 11/522 (2%)
Strand=Plus/Plus
Query 101817 TGGACTGCTGAAGAGGTAGATCTCTCAAAGGATTTGGACGATTGGAAGACTC---TAAAT 101873
||||||||||| ||| | |||||||| |||||| | |||| ||||| | | ||| |
Sbjct 1400629 TGGACTGCTGAGGAGATTGATCTCTCCAAGGATCTCCACGACTGGAACAACCGCCTAACT 1400688
Query 101874 GAAAATGAAAAGAAATTCATAAAATACATCCTGGCATTCTTTGCTGGGTCCGATGGAATT 101933
| |||| || || | ||||||| || ||||| |||| || ||||| ||
Sbjct 1400689 GCTGATGAGCAGTTCTTTGTCTCTCACATCCTTGCTTTCTTCGCTGCCTCTGATGGTATC 1400748
Query 101934 GTTTTTGAGAATATCAATAACAACTTTGCTGATGAGGTGCA-ATCCTCTGAAGCGAGATC 101992
|| ||||| || | || || |||||| || |||| |||| || | |
Sbjct 1400749 GTCAACGAGAACCTCGTCGAGCGATTCAGTGGTGAGGTCCAGATCC-CTGAGGCTCGTTG 1400807
Query 101993 TTTCTATGCGTATCAATGTCATAATGAA-ATGGTGCATGGGGAGACATACAGTAAACTCA 102051
||||| | | || | |||| ||| | | | ||| ||||| ||| || |
Sbjct 1400808 CTTCTACGGCT-TCCAGATCATGATGGAGAACATTCATTCCGAGACCTACTCCCTCCTTA 1400866
Query 102052 TAGACAAGTATATTAAGGATGGTGCTGAGAAGAAGC-AGCTCTTTGAAGCCATCCAAACA 102110
| |||| || || ||||| || || ||| | | ||||| | ||||| | ||
Sbjct 1400867 TCGACACATACATCAAGGAGCCCGCCCAGC-GAACCTATCTCTTCAACGCCATTGAGACC 1400925
Query 102111 GTTCCATGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGAT-ACAAAGTCGCG 102169
|||| || || | |||||| || || ||||| || ||| | | | || | | |
Sbjct 1400926 ATTCCCTGCATCCGAAAGAAGGCTGACTGGGCCATCCGATGGATCCAGGATAAGGACTCC 1400985
Query 102170 TTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTC 102229
| ||||||| |||| ||| | || ||||| ||||||||||||||||||| |||| |
Sbjct 1400986 T-CCTTTGCCCAGCGTCTCGTTGCCTTTGCTGCTGTTGAGGGTATCTTCTTCAGTGGTGC 1401044
Query 102230 CTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAA 102289
|||| | |||| | |||||||||||||| ||||||||||| ||||| ||||||||
Sbjct 1401045 CTTCGCCTCTATCTTCTGGCTCAAGAAGCGTGGTCTCATGCCTGGTCTGACTTTCTCCAA 1401104
Query 102290 CGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 102331
|||||| ||||||||||||||||| || ||| || |||||
Sbjct 1401105 CGAGCTCATCTCTCGTGACGAGGGTCTTCACACTGACTTTGC 1401146
>seq1
Length=6144005
Score = 105 bits (116), Expect = 8e-18
Identities = 244/359 (68%), Gaps = 13/359 (4%)
Strand=Plus/Plus
Query 16058 TCCCACGGCATCAATCTCATCAATGAAGACGATG-CATGG---TTGATTTTCGCGAGCGA 16113
||| | |||||||| || || ||||| || ||| || || ||| |||| || || |
Sbjct 755780 TCCAATGGCATCAAGTTCGTCGATGAAAACAATGGCAGGGGACTTGCTTTTGGCC-GC-A 755837
Query 16114 CTTCAAAGAGATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTG 16173
| ||||| || || || |||||||| || ||||||||||| ||||| |||| | |
Sbjct 755838 GTG--AAGAGGTCACGGACTCGCTTGGCACCAACACCAACAAAGATCTCGTCAAA-CTCG 755894
Query 16174 CGGCGGAACAT-TGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGA 16232
| | |||| | || ||||||||| || ||| || |||| ||||| || |||||
Sbjct 755895 CTACCAGACATGTAGAAAAAGGGGACACCAGCTTCGCCAGCAACAGCTCGAGCAAGAAGC 755954
Query 16233 GTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCCACTT 16292
|||||||| ||||| || ||| | |||||| |||| || | || || |||
Sbjct 755955 GTCTTACCAGTACCAGGAGGACCGACTAGGAGGACACCCTTGGGCAGTTTAGCACCAAGA 756014
Query 16293 CCAAAGTATCTCTCAGGTTGCTTAAGAAAATCCACAATCTCTTCCAATTCATCTTTGGCG 16352
| | | | || || | ||| ||||| || |||| |||| | || ||||||||
Sbjct 756015 TCGCTGAACTTTTCGGGATTCTTCAGAAACTCGACAACTTCTTGGAGCTCCTCTTTGGCT 756074
Query 16353 GCGTCAATCCCCTCAACATCGGTAAACCGAGTTTCAATTTCTTGTTCGGCATTGAACTC 16411
| ||| || | ||||||| | |||||||| | ||| | ||| || |||| |||
Sbjct 756075 TCATCACAGCCATGAACATCGTTGAACCGAGT---ATTTTGCTTTTCCGCCTTGACCTC 756130
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 620741212830160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |