Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20pininemorale_20[genbank_20GCA_5F002165215.1_202017-06-02] 153 sequences; 47,778,485 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq5 224 1e-53 seq7 131 2e-25 seq1 96.9 4e-15 >seq5 Length=2590615 Score = 224 bits (248), Expect = 1e-53 Identities = 1140/1783 (64%), Gaps = 57/1783 (3%) Strand=Plus/Plus Query 105551 TCAAGACTGAACTGAATTGGGCGCGCCTTTGCCTTAGATCGGAGATAGTACATCCCGGTC 105610 |||| | |||||||||| || || |||| | || || |||||||| |||||| Sbjct 1617684 TCAACAGTGAACTGAATAGGAGCAGCAGCAGCCTGTGTACGAAGGTAGTACATGCCGGTC 1617743 Query 105611 TTGAGTCCTTGTTTCCACGCGTACATA-TGCATAGAAGAGAGCTTGGACATCGTTGGACT 105669 ||||| || ||||||| || | || | ||||| | || |||| |||||| || Sbjct 1617744 TTGAGGCCAAGTTTCCA-GCCTGCAAAGTGCATGCTGGTGATCTTGCCCATCGTGGGGTC 1617802 Query 105670 TTCCATGAAAAGATTCAT--ACTTTGACTCTGGTCAATGAAGCGACCACGTTGTGCCGCC 105727 | |||| | |||| ||| |||| | ||||||||| ||| || | || ||| Sbjct 1617803 CTTCATGTGGATGTTCAGTGACTGGGACT--GATCAATGAAGGCACCTCGATCAGCAGCC 1617860 Query 105728 ATATCAATGACATCCTTCATCTTGATTTCCCACACTGTGCGGTAGAGATTCTTGATATCA 105787 || | || ||| | | ||| ||||| || || ||| ||| ||||| || Sbjct 1617861 ATCTGAACGACCTGGCGCTGAGAGATCTCCCAGACAGTCTTGTACAGAGCCTTGACGTCG 1617920 Query 105788 TCTGGGATATCTGAGATATTTTGAATTGAACC---CCCCGCCTTGACCATGAGATCCTTC 105844 | ||||| | | || || ||||| ||||| | | || ||| || | | |||| Sbjct 1617921 GCAGGGATGTTGGGAATGTTCTGAATGGAACCATTCTCAGCAATGA---TGCGGTTCTTC 1617977 Query 105845 ATATCCTTGGACCAAAGACCAATCTTCTTGAGATCATTGACGAGATGCTTGTTGACAATC 105904 ||| | | |||||| ||||| || | || || |||| || |||||||| | Sbjct 1617978 ATAGCATCGGACCACAGACCCATGTCGACAAGGTCCTTGAGCAGCCAGGGGTTGACAACC 1618037 Query 105905 ACAAACTCTCCCGCGAGGGTTCTTCTCAGATAGATGTTCGTCGTGTAGGGTTCAAAGCAT 105964 ||||| || ||||| | | | ||||| || | |||||||| || ||||| Sbjct 1618038 TGGAACTCACCAGCGAGAACACGGCGTTGGTAGATATTGGAGGTGTAGGGCTCGAAGCAC 1618097 Query 105965 TCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCCATCAAAAGACTG 106024 || || ||||||| || || | ||| ||| || ||||| || || | | |||||| Sbjct 1618098 TCGTTGTTACCCAGAATCTGGGAGGTACTGGCAGTAGGCATAGGAGCAAGGAGCAGACTG 1618157 Query 106025 TTACGAAGACCCTTTTCCTTGATGCGTTCCTTGAGAACA---TCCCAGTCGTAGTTG--A 106079 ||||| | || | | ||||| ||||| ||| | |||||||| || | | Sbjct 1618158 TTACGGATGCCGTGTGTCTTGAC---TTCCTCTCGAAGAGTCTCCCAGTCCCAGAGGTCA 1618214 Query 106080 GCTTGGTTTCACCTTCCCACATATCAAATTGAAGCACCCCTTGGGACGTGGGAGAACCCT 106139 | ||||| || |||| |||| ||||| || || | || | || | ||| ||||||| Sbjct 1618215 GAG-GGTTTGACGTTCC-ACATGTCAAACTGGAGGATACCCTCAGAGGCGGGGGAACCCT 1618272 Query 106140 CAAATGTCTCATAGGAACCTTGGGCTTCAGCCAATT-CACAGCTCGCCTCCAGGGATGCG 106198 || || |||| ||| | | | ||||| | ||| | || |||| ||| Sbjct 1618273 TGAAGGTGGAGTAGGGACCCTCCTCCTTAGCCAGCTGCACGGAG-GCAGTGAGGGCAGCG 1618331 Query 106199 TGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTGAATCAAATGCG 106258 ||||| ||||| || ||||| | || | ||| || || ||| || || | | Sbjct 1618332 TGATAAATGGTCTCGAAGATCTGCTTGTTGAGCTCACGAGCCTCGGGTGACTCGAAGG-G 1618390 Query 106259 TAGCGGCACAA-AATAAATACATCCGCGAGACCTTGAACACCCAAACCAATAGGTCTGTG 106317 | ||| | || || |||| ||||| || |||||||||| |||||| |||| ||| Sbjct 1618391 CATACGCAGAGCAAGGAAAGCATCGGCGAGGCCCTGAACACCCAGACCAATGGGTCGGTG 1618450 Query 106318 TCGCATATTAGACTTTCGCGCAGTCTCAACGGGATAAAAATTTCTGTCAATGACTCGGTT 106377 ||||| ||| || || || || || || || || || |||| ||| Sbjct 1618451 GCGCATGTTACTGTTGCGAGCCTCCTGGACAGGGTAGTGGTTCACATCGATGATCTTGTT 1618510 Query 106378 TAGATTTTTGGTAACAATCTTTGTGATTTCATG-AAGTTTTTCATAATCAAAAGTGCGAG 106436 | || |||||| || ||| | || || || || | | || | || || Sbjct 1618511 CAAGTTGCGAATAACAACCTGACTGACCTTGTGCAACTTCTTGA-AGTCGTA---GCAAG 1618566 Query 106437 TCTCTTCAT---TGACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCT 106493 || || | ||| | || || | | || || | ||||| ||||| || Sbjct 1618567 CTTCATCGTAGTTGATGAAGGAGGGCAGAGACAGAGAGGCAAGGTTGCAGACAGCGACCT 1618626 Query 106494 CATCCTTATCTGTGTACTCTAAAATTTCTGTACACAAGTTGGAACTCTTAATCGTCCCCA 106553 | || | | |||||| | |||||| || || | |||||| || || || || | Sbjct 1618627 CGTCAGGAGCACAGTACTCGATAATTTCAGTGCAAAGGTTGGAGCTTCGGATGGTACCGA 1618686 Query 106554 AATTCTTTTGGTTACTCTTTTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCG 106613 ||||||||||| ||||| ||| || |||||||||||||||||| | || | || | Sbjct 1618687 GGTTCTTTTGGTTGCTCTTGCGGTTACAGGCATCCTTGTAGAGCATGAATGGGTTTCCGG 1618746 Query 106614 TCTCCGTCTGTGACTTGAGAATTGCCTTCCACA-CATCGGCGGCTGGTACAATGGCGTTG 106672 |||| ||||| | || |||||| || | ||| | | || | | || | | || | | Sbjct 1618747 TCTCAGTCTGGGCCTCGAGAATGGCGTACCAAAGCTTCTGAGCCTTG---ATTGTCTTGC 1618803 Query 106673 GCCCGT--CCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGT 106730 | || | |||||| |||||||||| ||| || || || |||||||| || || Sbjct 1618804 GACCCTTGCCCTCCTTCTCGTACTTTTCGTACAGAGCCTCGAACTCCTCTCCGTAGCAGT 1618863 Query 106731 CGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGACCATTGACCACCCTCCTCAACCC 106790 ||| ||| || || || || ||||| | || | ||| | ||| || ||||| | Sbjct 1618864 CGGCGAGGCCAGGGCACTCGTTGGGACACATCAGTGTCCAGTCACCGTTCTTTTCAACAC 1618923 Query 106791 GCTTCATGAAAAGGTCTGGAATCCACAGG--GATGAAAAGAGATCTC-TACACCGAGCCT 106847 ||||||||||||| || || ||||| ||| || |||| ||||| | ||| || ||| Sbjct 1618924 GCTTCATGAAAAGATCAGGGATCCAAAGGGCGAGGAAA--AGATCACGGGCACGGA-CCT 1618980 Query 106848 CTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCT 106907 | || | ||| ||||| || | |||||||| || | || ||| | |||||| |||| Sbjct 1618981 CCTCCTTACCGTGGTTCTTACGGAGATCAAGGAAATCGAAGACATCAGAGTGCCAAGGCT 1619040 Query 106908 CAAGATAGACTGCGATAGATCCCTTTCG---ACGCCCAGCTTGATTTACATAGCGCGCTG 106964 | || |||| || | || || ||| ||| | || | ||||| || || | Sbjct 1619041 CGAGGTAGATGGCAAAAGCACCGGGTCGCTTGTTGCCACCCTGGTCGACATACCGAGCAG 1619100 Query 106965 TGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGACCATTTGT-CCCCCGA 107023 || ||| || || |||||||| |||| || ||||| ||| ||| || || || ||| Sbjct 1619101 TGTTGTTGAAGACACGAAGCATAGGAACAACACCATTCGATGTACCGTTGGTACCGGCGA 1619160 Query 107024 -ATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAATACCCCCAGCCCACTT 107082 || ||| | | || | | | || | | | |||||||| |||||| ||| Sbjct 1619161 TGTATGAG--CCAGTAGCACGAATACGGTGCACATTTAGACCAATACCACCAGCCATCTT 1619218 Query 107083 TGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTT 107142 ||||| ||||| | | ||||| | ||||| || | || ||| ||||| | Sbjct 1619219 GGAGATCATGGCACAGGTCTTGAGAGTATCGTAGATTCCCTCAATACTGTCGTCCTTCAT 1619278 Query 107143 GGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGG 107202 | | | ||||||| |||| || || || || || ||||||||||| || || Sbjct 1619279 ATCAACCAAGAAGCAAGATGACAATTGGGGCTGAGGGGTGCCGGCATTGAAGAGCGTGGG 1619338 Query 107203 TGTTGCGTGAATGAACATACCTTG--GGACATCTTGTCGTATGTCTCCAAGACAGAATCA 107260 | || || ||| | | |||| |||||| | ||||||||||||||| || Sbjct 1619339 GGAAGCATGCGTGA--AGAACTTGCTAGACATCAGATTGTATGTCTCCAAGACTCGCTCG 1619396 Query 107261 ATGTCTTCCCCGTGGATGCCGATGGCCACACGCATAAACATGT 107303 || || || || ||| || | | ||||||||| | ||||| Sbjct 1619397 ATATCATCACCCCAGATACCAACAGACACACGCATGATCATGT 1619439 >seq7 Length=1585612 Score = 131 bits (144), Expect = 2e-25 Identities = 334/503 (66%), Gaps = 18/503 (4%) Strand=Plus/Minus Query 116986 TAGTCCCCAACTCGCTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCATA 117045 ||||| |||| |||||||| |||||||||||||| ||| ||||| ||||| |||||| Sbjct 1401434 TAGTCGGCAACACGCTTCTCGAAGAAGTTGGTCTTGCCACCAAGGGAGATGTTCTCCATA 1401375 Query 117046 AAGTCAAATGGATTCTTCGCGTTCCAAA-----TGGGTGGCACCCCAACTTGTTTGAGGA 117100 ||||| || || || | || || | | | | || |||| |||| Sbjct 1401374 AAGTCGAAGGGGTTGGTGGCCTTGTAGACCTTCTCGTTG-----CCAAGAGCGACAAGGA 1401320 Query 117101 GACGATCCGACACATACTCAATGTACTCGGACATCTTCTCAGAGTTCATACCGATGAGAT 117160 ||||||| | || |||||||||||| ||| ||||||||||| |||| ||| Sbjct 1401319 GACGATCAGCGACGAACTCAATGTACTGCTTCATGAGGTCAGAGTTCATGCCGAGGAGGG 1401260 Query 117161 TACATGGGAGTGCGTCCAAGATGAACCCTTTCTCAATCTCAACCGCCTCTTTCACGATGG 117220 ||| || || || || || |||| | | |||||| || || || | | ||| Sbjct 1401259 CACAGGGAAGAGCTTCGGTGAGGAACTCCTGCTCAATGGTGACGGCATCAGTGATGATAT 1401200 Query 117221 CGTGGATAGTTTCGGTAGTGGGTCTA---TTACGCAAAGTCTTGAAGAGCTCCACGGCAA 117277 | ||||| | | || ||| | | || | || | || ||| || | ||| Sbjct 1401199 CCTGGATCATCTGCTTACTGGCACGACCCTTGAGGTGAGAGTGGAGGAGG--CATG-CAA 1401143 Query 117278 ACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCA 117337 | || ||| |||||||| || || || || || || || ||||| || || |||| Sbjct 1401142 AGTCAGTGTGAAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAAGTCAGACCAGGCA 1401083 Query 117338 TGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCT 117397 ||||||| |||||||| | ||| | |||| | ||| | || |||||||||||||| Sbjct 1401082 TGAGACCACGCTTCTTGAGCCAGAAGATAGAGGCGAAGGCACCACTGAAGAAGATACCCT 1401023 Query 117398 CCACACACGCAAACGCAAAAAGGCGCTCGGCGAAGGAGCGAGACTTTGT-GTCAAACCAT 117456 | ||| ||||| |||| || |||| ||| |||||| ||| | || | | | |||| Sbjct 1401022 CAACAGCAGCAAAGGCAACGAGACGCTGGGCAAAGGAG-GAGTCCTTATCCTGGATCCAT 1400964 Query 117457 TTCATTGCCCATTTCGCCTTCTT 117479 || ||||| | |||||||| Sbjct 1400963 CGGATGGCCCAGTCAGCCTTCTT 1400941 >seq1 Length=6144005 Score = 96.9 bits (106), Expect = 4e-15 Identities = 240/359 (67%), Gaps = 13/359 (4%) Strand=Plus/Plus Query 9365 TCCCACGGCATCAATCTCATCAATGAAGACAATA-CATGG---TTGATTTTCGCGGGCGA 9420 ||| | |||||||| || || ||||| ||||| || || ||| |||| || | | Sbjct 755780 TCCAATGGCATCAAGTTCGTCGATGAAAACAATGGCAGGGGACTTGCTTTTGGCCGCAGT 755839 Query 9421 TTTCAAAGAGATCGCGAACCCTTTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTG 9480 ||||| || || || | ||||| || ||||||||||| ||||| |||| | | Sbjct 755840 G----AAGAGGTCACGGACTCGCTTGGCACCAACACCAACAAAGATCTCGTCAAA-CTCG 755894 Query 9481 CGGCGGAACAT-TGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGA 9539 | | |||| | || ||||||||| || ||| || |||| ||||| || ||||| Sbjct 755895 CTACCAGACATGTAGAAAAAGGGGACACCAGCTTCGCCAGCAACAGCTCGAGCAAGAAGC 755954 Query 9540 GTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCCCGTGGAATCTTGGCGCCACTT 9599 |||||||| ||||| || ||| | |||||| ||||| || | || || ||| Sbjct 755955 GTCTTACCAGTACCAGGAGGACCGACTAGGAGGACACCCTTGGGCAGTTTAGCACCAAGA 756014 Query 9600 CCAAAGTATCTCTCAGGTTGCTTGAGAAAATCCACAATCTCTTCCAATTCATCTTTGGCG 9659 | | | | || || | ||| ||||| || |||| |||| | || |||||||| Sbjct 756015 TCGCTGAACTTTTCGGGATTCTTCAGAAACTCGACAACTTCTTGGAGCTCCTCTTTGGCT 756074 Query 9660 GCGTCAATCCCCTCAACATCGGTAAACCGGGTTTCAATTTCTTGTTCGGCATTGAACTC 9718 | ||| || | ||||||| | ||||| || | ||| | ||| || |||| ||| Sbjct 756075 TCATCACAGCCATGAACATCGTTGAACCGAGT---ATTTTGCTTTTCCGCCTTGACCTC 756130 Score = 91.5 bits (100), Expect = 2e-13 Identities = 124/173 (72%), Gaps = 0/173 (0%) Strand=Plus/Plus Query 155045 ATGGTCGTGTTGCACCACGATCCGGTCTCGCTGTGAAGCATGGTATTCAAGTTGGTGCGG 155104 |||| || |||| || ||||| ||||| ||| |||||| ||| | || || | Sbjct 2285681 ATGGACGCATTGCCCCTCGATCAGGTCTGGCTTCCAAGCATTTCATTGACACAGGCGCTG 2285740 Query 155105 GTGTTATTGATCCCGACTATACAGGTGAAGTCAAAGTCGTTCTCTTCAATCACGGAGACA 155164 |||| || ||| |||| || ||| ||||||| ||| | |||||||| || || Sbjct 2285741 GTGTCATCGATGCCGATTACCGTGGTCAAGTCAAGGTCCTGCTCTTCAACCATAACGAAT 2285800 Query 155165 AAGACTTTGAGGTAAAGAAAGGGGATCGCATCGCACAACTTGTCCTTGAGCGC 155217 ||||||||||| ||| |||| || ||||| || |||||||| || |||||| Sbjct 2285801 CCGACTTTGAGGTGAAGGAAGGCGACCGCATTGCTCAACTTGTTCTAGAGCGC 2285853 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589979671661720