Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20pininemorale_20[genbank_20GCA_5F002165215.1_202017-06-02] 153 sequences; 47,778,485 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq6 129 7e-25 >seq6 Length=2559796 Score = 129 bits (142), Expect = 7e-25 Identities = 322/482 (67%), Gaps = 9/482 (2%) Strand=Plus/Minus Query 159304 CAACCTAACGCAGGATCACAGGGTGAGTATGCAGGACTGTTAGCA--ATCCAAGCATACC 159361 || || ||| | || | |||||||||| || || || | || ||| | || |||| Sbjct 1534499 CAGCCCAACTCTGGTGCTCAGGGTGAGTTCGCTGGTCT--TCGCTGTATCAAGGCTTACC 1534442 Query 159362 ATCAAGGATCAGGA-GATGATAAAAGAAATGTATGTTTGATACCAGAGTCAGCACATGGA 159420 | | ||| || || | ||||| |||| || ||| | || || | || || || || Sbjct 1534441 A-CGAGGCTCGTGATGGCGATAAGCGAAAGGTCTGTCTTATCCCGGTTTCTGCTCACGGT 1534383 Query 159421 ACTAATCCTGCATCAGCAGTGATGGCAGGGATGAAAGTTGTAGGTGTCAAGTGTGATG-- 159478 || || ||||| || || | ||||| || ||||| ||||| |||||||||||| | Sbjct 1534382 ACCAACCCTGCTTCTGCTGCCATGGCTGGTATGAAGGTTGTTACTGTCAAGTGTGACGGC 1534323 Query 159479 ATGA-TGGCAACATAGACATCAAAGATCTAGAGAAGAAAGCAATCATGAATACATTTGAA 159537 | || ||| ||| | || ||| | ||||| || || ||| | | | ||| Sbjct 1534322 AAGACTGGTAACTTGGATATCGAGGATCTCAAGGCCAAGTGCGTCAAGCACGCTGATGAG 1534263 Query 159538 CTGTCATGTATTATGATTACATATCCATCTACACATGGTGTATTTGAAACAAACATCAGA 159597 || | ||| ||| |||| ||||| ||||| ||||| || || | | |||| Sbjct 1534262 CTTGCTGCTATCATGGTTACTTATCCCTCTACTTTCGGTGTCTTCGAGCCTGAGATCAAG 1534203 Query 159598 CAGATATGTAAGATTGTTCATGAGAATGGTGGTCAGGTATATCTTGATGGTGCAAATCTA 159657 || | ||| | |||| || ||| |||| |||| || || | || || || || | Sbjct 1534202 CAAGTCTGTGATCTTGTCCACGAGCATGGCGGTCTTGTCTACATGGACGGCGCCAACATG 1534143 Query 159658 AATGCACAGGTAGGTCTAGCAAAACCATGTGACTATGGTGCAGATGTATGTCATCTAAAC 159717 || || ||| | ||||| | || ||||| |||||| ||||| || ||||| ||| Sbjct 1534142 AACGCTCAGATTGGTCTCTGCAGCCCCGGTGACATTGGTGCCGATGTCTGCCATCTCAAC 1534083 Query 159718 TTACATAAGACATTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATTGGT 159777 | || ||||| ||||||||||| || || ||||| ||||| || || || ||||| | | Sbjct 1534082 CTCCACAAGACCTTCTGTATTCCTCACGGCGGTGGTGGTCCCGGTGTTGGCCCTATCGCT 1534023 Query 159778 GT 159779 || Sbjct 1534022 GT 1534021 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588050075352080