Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20pininemorale_20[genbank_20GCA_5F002165215.1_202017-06-02]
153 sequences; 47,778,485 total letters
Query= NC_019491.1
Length=291144
Score E
Sequences producing significant alignments: (Bits) Value
seq5 354 2e-92
seq7 176 8e-39
>seq5
Length=2590615
Score = 354 bits (392), Expect = 2e-92
Identities = 1232/1886 (65%), Gaps = 96/1886 (5%)
Strand=Plus/Plus
Query 212553 ACCGTAAACTGTACTGGATCAGCAGCAGCCTTGGTGCGTAGATAGTACATGCCGGTCTTT 212612
|| || ||||| | ||| |||||||||||| || || || |||||||||||||||||
Sbjct 1617687 ACAGTGAACTGAATAGGAGCAGCAGCAGCCTGTGTACGAAGGTAGTACATGCCGGTCTTG 1617746
Query 212613 AGGCCCTTGCCCCAGCCGTGCAT-GTGCATTGCTG-TGAGTTTCTTCAGCTTAATATTCT 212670
||||| |||||| |||| |||||| |||| ||| |||| | || |
Sbjct 1617747 AGGCCAAGTTTCCAGCC-TGCAAAGTGCAT-GCTGGTGA---TCTTGCCC---ATCGTGG 1617798
Query 212671 GGTCATCCTCGTGGCCCAGATGTAGGTTCAGGGACTGACTCTGGTCTATGAATGGGGCCC 212730
|||| | | |||| | |||||| ||||| ||| || ||||| | | |
Sbjct 1617799 GGTCCTTCATGTGG---------ATGTTCAGTGACTGGGACTGATCAATGAAGGCACCTC 1617849
Query 212731 TGTCAGCGGCCATGTCTATGATATCTCTCTGGGAGAGCTCCCACACGGTCTTGAAGATTT 212790
||||| ||||| | | || | | ||| |||| |||||| || |||||| | |
Sbjct 1617850 GATCAGCAGCCATCTGAACGACCTGGCGCTGAGAGATCTCCCAGACAGTCTTGTACAGAG 1617909
Query 212791 CTTTGAGGTCCTCTGGGAAGCCGGGGATGTTCTGCACAGACCCCCTGTGTATGGTCAGC- 212849
| |||| ||| | |||| | ||| |||||||| | || || || |||||
Sbjct 1617910 CCTTGACGTCGGCAGGGATGTTGGGAATGTTCTGAATGGAACC-------ATTCTCAGCA 1617962
Query 212850 -TGCAGGCG------CATGTCCTCGTTCCAGAGGCCCCTGGTCTCCAGGCACTTGACCAG 212902
|| | ||| ||| | ||| ||| || ||| || | ||| ||||| |||
Sbjct 1617963 ATG-ATGCGGTTCTTCATAGCATCGGACCACAGACCCATGTCGACAAGGTCCTTGAGCAG 1618021
Query 212903 GTGAGGGTTGACTATCTGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGT 212962
|||||||| | |||||| ||||| | ||| || | | ||||| | || || ||
Sbjct 1618022 CCAGGGGTTGACAACCTGGAACTCACCAGCGAGAACACGGCGTTGGTAGATATTGGAGGT 1618081
Query 212963 GTAGGGCTCGATGCTCTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGG 213022
||||||||||| || ||||||||| ||||||||||| | || ||||| || ||||| ||
Sbjct 1618082 GTAGGGCTCGAAGCACTCGTTGTTACCCAGAATCTGGGAGGTACTGGCAGTAGGCATAGG 1618141
Query 213023 AGCCACCAGGAGACTGTTCCTCACTCCGTGCTCGCCGATGAGGCGC---CGAAGC-TCTG 213078
||| | || |||||||| | | ||||| | | ||| | ||||| |||
Sbjct 1618142 AGCAAGGAGCAGACTGTTACGGATGCCGTGT--GTCT-TGACTTCCTCTCGAAGAGTCT- 1618197
Query 213079 CCCAGTCCCATCTGCCAGACAGGTCCTCGTCCTTCACGTTCCACATGTCAAACTGCAAGA 213138
|||||||||| | |||| ||| || |||||||||||||||||||| | ||
Sbjct 1618198 CCCAGTCCCAGAGGTCAGAG-GGT--------TTGACGTTCCACATGTCAAACTGGAGGA 1618248
Query 213139 TGCCTTTGCTCA----CGGGGCTGCCCTGGTAAGAGGAGTAGGGGCCATGCTCCTTGGCC 213194
| || |||| ||||| |||| | | | ||||||||| || | |||||| |||
Sbjct 1618249 TACC----CTCAGAGGCGGGGGAACCCTTGAAGGTGGAGTAGGGACCCTCCTCCTTAGCC 1618304
Query 213195 AGCTCGCA-GGACGCCTGCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTGAG 213253
|||| ||| ||| || |||||||||| || ||||| || || |||| | |||||||
Sbjct 1618305 AGCT-GCACGGAGGCAGTGAGGGCAGCGTGATAAATGGTCTCGAAGATCTGCTTGTTGAG 1618363
Query 213254 CTTCTTGGCCTCTGGGGACGTGAAGGGCATCATCATGCGTTGGAACACATCAGCCAGCCC 213313
|| ||||| || ||| ||||||||| || |||| |||| || || ||
Sbjct 1618364 CTCACGAGCCTCGGGTGACTCGAAGGGCATACGCAGAGCAAGGAAAGCATCGGCGAGGCC 1618423
Query 213314 CTGGACCCCGATGCCGATGGGTCTGTGTCTCAGGTTAGACTTG-GAGCACTCCTCCAAGG 213372
||| || || | || ||||||| ||| | || |||| ||| |||| ||||| | |
Sbjct 1618424 CTGAACACCCAGACCAATGGGTCGGTGGCGCATGTTACTGTTGCGAGC-CTCCTGGACAG 1618482
Query 213373 GGTAAAAGTTGCAGTCGATGATCTTGTTGAGGTTGCGGGTGGCCACTTTGGTGACATGGG 213432
|||| ||| |||||||||||||| | |||||| | | || | |||| | |
Sbjct 1618483 GGTAGTGGTTCACATCGATGATCTTGTTCAAGTTGCGAATAACAACCTGACTGACCTTGT 1618542
Query 213433 CCAGGTACTCGTGATTGAACACGTAGCCCCCGTCCT-GCACAAACTCAGGCAGGGC-GAT 213490
|| | || |||| |||||| | || | | | | | | ||||| ||
Sbjct 1618543 GCAACTTCT------TGAAGTCGTAGCAAGCTTCATCGTAGTTGATGAAGGAGGGCAGAG 1618596
Query 213491 GCTG----GCCAGGTTGCAAACGGCCACCTCCTGAGAGTCTGTGTACTCCATGATCTCGG 213546
| | || |||||||| || || ||||| | || | |||||| || || || |
Sbjct 1618597 ACAGAGAGGCAAGGTTGCAGACAGCGACCTCGTCAGGAGCACAGTACTCGATAATTTCAG 1618656
Query 213547 TGCACAGGTTGCTGCATCGGATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCGTTGGCAG 213606
|||| |||||| || ||||||||| || ||||||| ||||| ||| ||| | |||
Sbjct 1618657 TGCAAAGGTTGGAGCTTCGGATGGTACCGAGGTTCTTTTGGTTGCTCTT-GCGGTTACAG 1618715
Query 213607 A-ATCCTTGTAGAGCATGTAGGGGGACCCGGTCTCTAGCTGGGACACCAGTATCTGGCTC 213665
|||||||||||||||| | ||| |||||||| ||||| | | || || | |
Sbjct 1618716 GCATCCTTGTAGAGCATGAATGGGTTTCCGGTCTCAGTCTGGGCCTCGAGAATGGCGTAC 1618775
Query 213666 CAGAGGTACCTGGCCTTGACCACCCGCCTGACAGCTCCGGGCGTAGCCTCGTACTGTTCG 213725
|| || | | ||||||| | | ||| | | | | |||||||| ||||
Sbjct 1618776 CAAAGCTTCTGAGCCTTGATTGTCTTGC-GACCCTTGCCCTCCTT--CTCGTACTTTTCG 1618832
Query 213726 TAGAGCTCGTTGAATTCGTGGCCCCAGACCCTGTCCAGTCCCGGACAGGATGCGGGACAC 213785
|| || | | ||| || | || || | | || || || || |||||||
Sbjct 1618833 TACAGAGCCTCGAACTCCTCTCCGTAGCAGTCGGCGAGGCCAGGGCACTCGTTGGGACAC 1618892
Query 213786 ATGAGGCTCCAGTCCCCGTCATCTCTGACTCTCTGCATGAACAGGTCCGGGACCCACAGC 213845
|| || ||||||| |||| | | || | || |||||| || || |||| ||| ||
Sbjct 1618893 ATCAGTGTCCAGTCACCGTTCTTTTCAACACGCTTCATGAAAAGATCAGGGATCCAAAGG 1618952
Query 213846 GCGGTGAACAGGTCCCTGGTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGATCTAGA 213905
||| ||| || || | || | ||| ||| || ||| || || ||||| ||
Sbjct 1618953 GCGAGGAAAAGATCACGGGCACGGACCTCCTCCTTACCGTGGTTCTTACGGAGATCAAGG 1619012
Query 213906 AAGTCAAAGATGTCCGCGTGCCACGGCTCCATGTAGATGGCAAAGGCGCCCG---GCCTC 213962
|| || |||| || | |||||| ||||| | |||||||||||| || || | || |
Sbjct 1619013 AAATCGAAGACATCAGAGTGCCAAGGCTCGAGGTAGATGGCAAAAGCACCGGGTCGCTTG 1619072
Query 213963 TTGCCGCCCTGGTCCACCAGCCTGGCCACCATGTTGAAGATGCGCAGGACGGGTACCAGC 214022
||||| |||||||| || || || ||||||||| || || | || || |
Sbjct 1619073 TTGCCACCCTGGTCGACATACCGAGCAGTGTTGTTGAAGACACGAAGCATAGGAACAACA 1619132
Query 214023 CCGTTGGACTGT-CCGTTGGTTCCCGCTATATACGAGCCGGAGGCCC--TCAGGTTGCTC 214079
|| || || ||| |||||||| || || || || ||||| | || | | | ||| |
Sbjct 1619133 CCATTCGA-TGTACCGTTGGTACCGGCGATGTATGAGCCAGTAGCACGAATACGGTGCAC 1619191
Query 214080 ATGGAGAGCCCTATGCCACCGGCGTACTTGGAGATCATGGCGCAGCGCCTCACAGTCTCC 214139
|| ||| || || ||||| || ||||||||||||||| ||| | | | ||| ||
Sbjct 1619192 ATTTAGA--CCAATACCACCAGCCATCTTGGAGATCATGGCACAGGTCTTGAGAGTATCG 1619249
Query 214140 ATGATGCCGGCCATGCTGTCATCTGTGAGGTTCAGCAAGAAGCAGCTCGAGAGCTGGGGC 214199
||| || | || ||||| || | | | | ||||||||| || | ||||||
Sbjct 1619250 TAGATTCCCTCAATACTGTCGTCCTTCATATCAACCAAGAAGCAAGATGACAATTGGGGC 1619309
Query 214200 CTGGACGAGCCAGAGTTGAAAAGCGTGGGGCTGGCATGGATCATAAACTTGTTAGAGAGG 214259
| | ||| | ||||| ||||||||| ||||| | | |||||| |||| |
Sbjct 1619310 TGAGGGGTGCCGGCATTGAAGAGCGTGGGGGAAGCATGCGTGAAGAACTTGCTAGACATC 1619369
Query 214260 AGCCTGTAGGTCTCCAGGACTGAGGGGATGTCGTGCTTGTGGATCTGTAGAG-CGCACCT 214318
|| |||| ||||||| |||| ||| || | ||| | || | || |
Sbjct 1619370 AGATTGTATGTCTCCAAGACTCGCTCGATATCATCACCCCAGATACCAACAGACACA-CG 1619428
Query 214319 CATCAGCATGTGCTGGGGCCTCTCTATGGGTCCTTTGGGGC--CCTTGAGCAGGTAGGAG 214376
||| | ||||||||| || | ||| | ||| | | |||||| ||||| ||
Sbjct 1619429 CATGATCATGTGCTGAGGGCGCTCGA--CAATCTTACCGTCAATCTTGAGGAGGTATGAT 1619486
Query 214377 CGCTCCAGAGTCTTGAACCCAAAGTA 214402
||||||| ||||||||| ||||||||
Sbjct 1619487 CGCTCCAAAGTCTTGAAGCCAAAGTA 1619512
>seq7
Length=1585612
Score = 176 bits (194), Expect = 8e-39
Identities = 483/733 (66%), Gaps = 19/733 (3%)
Strand=Plus/Minus
Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898
||||||||| | || | ||||| |||||||| ||||| || | | |||||||||||
Sbjct 1401438 CTGGTAGTCGGCAACACGCTTCTCGAAGAAGTTGGTCTTGCCACCAAGGGAGATGTTCTC 1401379
Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTATACACCCGTGTCAGGCCCATCTGTTCCA-GCA 47957
||| ||| ||||||||||| | || || ||| | || ||| | || | |
Sbjct 1401378 CATAAAGTCGAAGGGGTTGGTGGCCTTGTAGACCT-TCTCGTTGCCAAGAGCGACAAGGA 1401320
Query 47958 GGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGGG 48017
| |||| |||||| |||| ||||| | ||||||| ||||||||| | |||||
Sbjct 1401319 GACGATCAGCGACGAACTCAATGTACTGCTTCATGAGGTCAGAGTTCATGCCGAGGAGGG 1401260
Query 48018 ACACGGGCAA-AGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATC 48076
||| || || ||| | ||||| ||||||| ||| || ||||| || | ||
Sbjct 1401259 -CACAGGGAAGAGCTTCGGTGAGGAACTCCTGCTCAATGGTGACGGCATCAGTGATGATA 1401201
Query 48077 TGCTTAACGCGGGACTCTGAGGGTTTGTTGCGCAGGTGCTTG------GCATAGAGCATG 48130
| || ||| || | || | || | | |||| | | ||| | |
Sbjct 1401200 TCCT-------GGA-TCATCTGCTTACTGGCAC-GACCCTTGAGGTGAGAGTGGAGGAGG 1401150
Query 48131 CAGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGA 48190
|| |||||||| |||| | || ||||| || ||||||| |||||||||| |||
Sbjct 1401149 CATGCAAAGTCAGTGTGAAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAAGTCAGA 1401090
Query 48191 CCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAG 48250
|||||||||| || | || ||||||||||| || | ||||| | ||| |||||||
Sbjct 1401089 CCAGGCATGAGACCACGCTTCTTGAGCCAGAAGATAGAGGCGAAGGCACCACTGAAGAAG 1401030
Query 48251 ATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAG 48310
|| ||||| || || || || || ||| | || | || || | || ||| || |
Sbjct 1401029 ATACCCTCAACAGCAGCAAAGGCAACGAGACGCTGGGCAAAGGAGGAGTCCTTATCCTGG 1400970
Query 48311 ATCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGG 48370
||||| | |||||||| |||||||| |||||| || || ||||| ||||| |
Sbjct 1400969 ATCCATCGGATGGCCCAGTCAGCCTTCTTTCGGATGCAGGGAATGGTCTCAATGGCGTTG 1400910
Query 48371 AAGAGCTTCTTGCACTCACCTGCGTCCGCAACATAGGTAGTGAGCAGCTTTGCGTACATC 48430
||||| | | | || | | ||| | || || || || | ||| ||
Sbjct 1400909 AAGAGATAGGTTCGCTGGGCGGGCTCCTTGATGTATGTGTCGATAAGGAGGGAGTAGGTC 1400850
Query 48431 TCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACACC 48490
|| || || | ||||| || ||||||||| ||||||||| | |||||| | |
Sbjct 1400849 TCGGAATGAATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCAACGAGCCTCAGGGATC 1400790
Query 48491 TGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCAGCA 48550
|| || || ||||| ||| | || ||||| ||||| || ||||| || |||||
Sbjct 1400789 TGGACCTCACCACTGAATCGCTCGACGAGGTTCTCGTTGACGATACCATCAGAGGCAGCG 1400730
Query 48551 AAGAAGGCAAGGA 48563
||||| |||||||
Sbjct 1400729 AAGAAAGCAAGGA 1400717
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 931531018443520
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