Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20pininemorale_20[genbank_20GCA_5F002165215.1_202017-06-02] 153 sequences; 47,778,485 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq5 354 2e-92 seq7 176 8e-39 >seq5 Length=2590615 Score = 354 bits (392), Expect = 2e-92 Identities = 1232/1886 (65%), Gaps = 96/1886 (5%) Strand=Plus/Plus Query 212553 ACCGTAAACTGTACTGGATCAGCAGCAGCCTTGGTGCGTAGATAGTACATGCCGGTCTTT 212612 || || ||||| | ||| |||||||||||| || || || ||||||||||||||||| Sbjct 1617687 ACAGTGAACTGAATAGGAGCAGCAGCAGCCTGTGTACGAAGGTAGTACATGCCGGTCTTG 1617746 Query 212613 AGGCCCTTGCCCCAGCCGTGCAT-GTGCATTGCTG-TGAGTTTCTTCAGCTTAATATTCT 212670 ||||| |||||| |||| |||||| |||| ||| |||| | || | Sbjct 1617747 AGGCCAAGTTTCCAGCC-TGCAAAGTGCAT-GCTGGTGA---TCTTGCCC---ATCGTGG 1617798 Query 212671 GGTCATCCTCGTGGCCCAGATGTAGGTTCAGGGACTGACTCTGGTCTATGAATGGGGCCC 212730 |||| | | |||| | |||||| ||||| ||| || ||||| | | | Sbjct 1617799 GGTCCTTCATGTGG---------ATGTTCAGTGACTGGGACTGATCAATGAAGGCACCTC 1617849 Query 212731 TGTCAGCGGCCATGTCTATGATATCTCTCTGGGAGAGCTCCCACACGGTCTTGAAGATTT 212790 ||||| ||||| | | || | | ||| |||| |||||| || |||||| | | Sbjct 1617850 GATCAGCAGCCATCTGAACGACCTGGCGCTGAGAGATCTCCCAGACAGTCTTGTACAGAG 1617909 Query 212791 CTTTGAGGTCCTCTGGGAAGCCGGGGATGTTCTGCACAGACCCCCTGTGTATGGTCAGC- 212849 | |||| ||| | |||| | ||| |||||||| | || || || ||||| Sbjct 1617910 CCTTGACGTCGGCAGGGATGTTGGGAATGTTCTGAATGGAACC-------ATTCTCAGCA 1617962 Query 212850 -TGCAGGCG------CATGTCCTCGTTCCAGAGGCCCCTGGTCTCCAGGCACTTGACCAG 212902 || | ||| ||| | ||| ||| || ||| || | ||| ||||| ||| Sbjct 1617963 ATG-ATGCGGTTCTTCATAGCATCGGACCACAGACCCATGTCGACAAGGTCCTTGAGCAG 1618021 Query 212903 GTGAGGGTTGACTATCTGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGT 212962 |||||||| | |||||| ||||| | ||| || | | ||||| | || || || Sbjct 1618022 CCAGGGGTTGACAACCTGGAACTCACCAGCGAGAACACGGCGTTGGTAGATATTGGAGGT 1618081 Query 212963 GTAGGGCTCGATGCTCTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGG 213022 ||||||||||| || ||||||||| ||||||||||| | || ||||| || ||||| || Sbjct 1618082 GTAGGGCTCGAAGCACTCGTTGTTACCCAGAATCTGGGAGGTACTGGCAGTAGGCATAGG 1618141 Query 213023 AGCCACCAGGAGACTGTTCCTCACTCCGTGCTCGCCGATGAGGCGC---CGAAGC-TCTG 213078 ||| | || |||||||| | | ||||| | | ||| | ||||| ||| Sbjct 1618142 AGCAAGGAGCAGACTGTTACGGATGCCGTGT--GTCT-TGACTTCCTCTCGAAGAGTCT- 1618197 Query 213079 CCCAGTCCCATCTGCCAGACAGGTCCTCGTCCTTCACGTTCCACATGTCAAACTGCAAGA 213138 |||||||||| | |||| ||| || |||||||||||||||||||| | || Sbjct 1618198 CCCAGTCCCAGAGGTCAGAG-GGT--------TTGACGTTCCACATGTCAAACTGGAGGA 1618248 Query 213139 TGCCTTTGCTCA----CGGGGCTGCCCTGGTAAGAGGAGTAGGGGCCATGCTCCTTGGCC 213194 | || |||| ||||| |||| | | | ||||||||| || | |||||| ||| Sbjct 1618249 TACC----CTCAGAGGCGGGGGAACCCTTGAAGGTGGAGTAGGGACCCTCCTCCTTAGCC 1618304 Query 213195 AGCTCGCA-GGACGCCTGCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTGAG 213253 |||| ||| ||| || |||||||||| || ||||| || || |||| | ||||||| Sbjct 1618305 AGCT-GCACGGAGGCAGTGAGGGCAGCGTGATAAATGGTCTCGAAGATCTGCTTGTTGAG 1618363 Query 213254 CTTCTTGGCCTCTGGGGACGTGAAGGGCATCATCATGCGTTGGAACACATCAGCCAGCCC 213313 || ||||| || ||| ||||||||| || |||| |||| || || || Sbjct 1618364 CTCACGAGCCTCGGGTGACTCGAAGGGCATACGCAGAGCAAGGAAAGCATCGGCGAGGCC 1618423 Query 213314 CTGGACCCCGATGCCGATGGGTCTGTGTCTCAGGTTAGACTTG-GAGCACTCCTCCAAGG 213372 ||| || || | || ||||||| ||| | || |||| ||| |||| ||||| | | Sbjct 1618424 CTGAACACCCAGACCAATGGGTCGGTGGCGCATGTTACTGTTGCGAGC-CTCCTGGACAG 1618482 Query 213373 GGTAAAAGTTGCAGTCGATGATCTTGTTGAGGTTGCGGGTGGCCACTTTGGTGACATGGG 213432 |||| ||| |||||||||||||| | |||||| | | || | |||| | | Sbjct 1618483 GGTAGTGGTTCACATCGATGATCTTGTTCAAGTTGCGAATAACAACCTGACTGACCTTGT 1618542 Query 213433 CCAGGTACTCGTGATTGAACACGTAGCCCCCGTCCT-GCACAAACTCAGGCAGGGC-GAT 213490 || | || |||| |||||| | || | | | | | | ||||| || Sbjct 1618543 GCAACTTCT------TGAAGTCGTAGCAAGCTTCATCGTAGTTGATGAAGGAGGGCAGAG 1618596 Query 213491 GCTG----GCCAGGTTGCAAACGGCCACCTCCTGAGAGTCTGTGTACTCCATGATCTCGG 213546 | | || |||||||| || || ||||| | || | |||||| || || || | Sbjct 1618597 ACAGAGAGGCAAGGTTGCAGACAGCGACCTCGTCAGGAGCACAGTACTCGATAATTTCAG 1618656 Query 213547 TGCACAGGTTGCTGCATCGGATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCGTTGGCAG 213606 |||| |||||| || ||||||||| || ||||||| ||||| ||| ||| | ||| Sbjct 1618657 TGCAAAGGTTGGAGCTTCGGATGGTACCGAGGTTCTTTTGGTTGCTCTT-GCGGTTACAG 1618715 Query 213607 A-ATCCTTGTAGAGCATGTAGGGGGACCCGGTCTCTAGCTGGGACACCAGTATCTGGCTC 213665 |||||||||||||||| | ||| |||||||| ||||| | | || || | | Sbjct 1618716 GCATCCTTGTAGAGCATGAATGGGTTTCCGGTCTCAGTCTGGGCCTCGAGAATGGCGTAC 1618775 Query 213666 CAGAGGTACCTGGCCTTGACCACCCGCCTGACAGCTCCGGGCGTAGCCTCGTACTGTTCG 213725 || || | | ||||||| | | ||| | | | | |||||||| |||| Sbjct 1618776 CAAAGCTTCTGAGCCTTGATTGTCTTGC-GACCCTTGCCCTCCTT--CTCGTACTTTTCG 1618832 Query 213726 TAGAGCTCGTTGAATTCGTGGCCCCAGACCCTGTCCAGTCCCGGACAGGATGCGGGACAC 213785 || || | | ||| || | || || | | || || || || ||||||| Sbjct 1618833 TACAGAGCCTCGAACTCCTCTCCGTAGCAGTCGGCGAGGCCAGGGCACTCGTTGGGACAC 1618892 Query 213786 ATGAGGCTCCAGTCCCCGTCATCTCTGACTCTCTGCATGAACAGGTCCGGGACCCACAGC 213845 || || ||||||| |||| | | || | || |||||| || || |||| ||| || Sbjct 1618893 ATCAGTGTCCAGTCACCGTTCTTTTCAACACGCTTCATGAAAAGATCAGGGATCCAAAGG 1618952 Query 213846 GCGGTGAACAGGTCCCTGGTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGATCTAGA 213905 ||| ||| || || | || | ||| ||| || ||| || || ||||| || Sbjct 1618953 GCGAGGAAAAGATCACGGGCACGGACCTCCTCCTTACCGTGGTTCTTACGGAGATCAAGG 1619012 Query 213906 AAGTCAAAGATGTCCGCGTGCCACGGCTCCATGTAGATGGCAAAGGCGCCCG---GCCTC 213962 || || |||| || | |||||| ||||| | |||||||||||| || || | || | Sbjct 1619013 AAATCGAAGACATCAGAGTGCCAAGGCTCGAGGTAGATGGCAAAAGCACCGGGTCGCTTG 1619072 Query 213963 TTGCCGCCCTGGTCCACCAGCCTGGCCACCATGTTGAAGATGCGCAGGACGGGTACCAGC 214022 ||||| |||||||| || || || ||||||||| || || | || || | Sbjct 1619073 TTGCCACCCTGGTCGACATACCGAGCAGTGTTGTTGAAGACACGAAGCATAGGAACAACA 1619132 Query 214023 CCGTTGGACTGT-CCGTTGGTTCCCGCTATATACGAGCCGGAGGCCC--TCAGGTTGCTC 214079 || || || ||| |||||||| || || || || ||||| | || | | | ||| | Sbjct 1619133 CCATTCGA-TGTACCGTTGGTACCGGCGATGTATGAGCCAGTAGCACGAATACGGTGCAC 1619191 Query 214080 ATGGAGAGCCCTATGCCACCGGCGTACTTGGAGATCATGGCGCAGCGCCTCACAGTCTCC 214139 || ||| || || ||||| || ||||||||||||||| ||| | | | ||| || Sbjct 1619192 ATTTAGA--CCAATACCACCAGCCATCTTGGAGATCATGGCACAGGTCTTGAGAGTATCG 1619249 Query 214140 ATGATGCCGGCCATGCTGTCATCTGTGAGGTTCAGCAAGAAGCAGCTCGAGAGCTGGGGC 214199 ||| || | || ||||| || | | | | ||||||||| || | |||||| Sbjct 1619250 TAGATTCCCTCAATACTGTCGTCCTTCATATCAACCAAGAAGCAAGATGACAATTGGGGC 1619309 Query 214200 CTGGACGAGCCAGAGTTGAAAAGCGTGGGGCTGGCATGGATCATAAACTTGTTAGAGAGG 214259 | | ||| | ||||| ||||||||| ||||| | | |||||| |||| | Sbjct 1619310 TGAGGGGTGCCGGCATTGAAGAGCGTGGGGGAAGCATGCGTGAAGAACTTGCTAGACATC 1619369 Query 214260 AGCCTGTAGGTCTCCAGGACTGAGGGGATGTCGTGCTTGTGGATCTGTAGAG-CGCACCT 214318 || |||| ||||||| |||| ||| || | ||| | || | || | Sbjct 1619370 AGATTGTATGTCTCCAAGACTCGCTCGATATCATCACCCCAGATACCAACAGACACA-CG 1619428 Query 214319 CATCAGCATGTGCTGGGGCCTCTCTATGGGTCCTTTGGGGC--CCTTGAGCAGGTAGGAG 214376 ||| | ||||||||| || | ||| | ||| | | |||||| ||||| || Sbjct 1619429 CATGATCATGTGCTGAGGGCGCTCGA--CAATCTTACCGTCAATCTTGAGGAGGTATGAT 1619486 Query 214377 CGCTCCAGAGTCTTGAACCCAAAGTA 214402 ||||||| ||||||||| |||||||| Sbjct 1619487 CGCTCCAAAGTCTTGAAGCCAAAGTA 1619512 >seq7 Length=1585612 Score = 176 bits (194), Expect = 8e-39 Identities = 483/733 (66%), Gaps = 19/733 (3%) Strand=Plus/Minus Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898 ||||||||| | || | ||||| |||||||| ||||| || | | ||||||||||| Sbjct 1401438 CTGGTAGTCGGCAACACGCTTCTCGAAGAAGTTGGTCTTGCCACCAAGGGAGATGTTCTC 1401379 Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTATACACCCGTGTCAGGCCCATCTGTTCCA-GCA 47957 ||| ||| ||||||||||| | || || ||| | || ||| | || | | Sbjct 1401378 CATAAAGTCGAAGGGGTTGGTGGCCTTGTAGACCT-TCTCGTTGCCAAGAGCGACAAGGA 1401320 Query 47958 GGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGGG 48017 | |||| |||||| |||| ||||| | ||||||| ||||||||| | ||||| Sbjct 1401319 GACGATCAGCGACGAACTCAATGTACTGCTTCATGAGGTCAGAGTTCATGCCGAGGAGGG 1401260 Query 48018 ACACGGGCAA-AGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATC 48076 ||| || || ||| | ||||| ||||||| ||| || ||||| || | || Sbjct 1401259 -CACAGGGAAGAGCTTCGGTGAGGAACTCCTGCTCAATGGTGACGGCATCAGTGATGATA 1401201 Query 48077 TGCTTAACGCGGGACTCTGAGGGTTTGTTGCGCAGGTGCTTG------GCATAGAGCATG 48130 | || ||| || | || | || | | |||| | | ||| | | Sbjct 1401200 TCCT-------GGA-TCATCTGCTTACTGGCAC-GACCCTTGAGGTGAGAGTGGAGGAGG 1401150 Query 48131 CAGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGA 48190 || |||||||| |||| | || ||||| || ||||||| |||||||||| ||| Sbjct 1401149 CATGCAAAGTCAGTGTGAAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAAGTCAGA 1401090 Query 48191 CCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAG 48250 |||||||||| || | || ||||||||||| || | ||||| | ||| ||||||| Sbjct 1401089 CCAGGCATGAGACCACGCTTCTTGAGCCAGAAGATAGAGGCGAAGGCACCACTGAAGAAG 1401030 Query 48251 ATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAG 48310 || ||||| || || || || || ||| | || | || || | || ||| || | Sbjct 1401029 ATACCCTCAACAGCAGCAAAGGCAACGAGACGCTGGGCAAAGGAGGAGTCCTTATCCTGG 1400970 Query 48311 ATCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGG 48370 ||||| | |||||||| |||||||| |||||| || || ||||| ||||| | Sbjct 1400969 ATCCATCGGATGGCCCAGTCAGCCTTCTTTCGGATGCAGGGAATGGTCTCAATGGCGTTG 1400910 Query 48371 AAGAGCTTCTTGCACTCACCTGCGTCCGCAACATAGGTAGTGAGCAGCTTTGCGTACATC 48430 ||||| | | | || | | ||| | || || || || | ||| || Sbjct 1400909 AAGAGATAGGTTCGCTGGGCGGGCTCCTTGATGTATGTGTCGATAAGGAGGGAGTAGGTC 1400850 Query 48431 TCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACACC 48490 || || || | ||||| || ||||||||| ||||||||| | |||||| | | Sbjct 1400849 TCGGAATGAATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCAACGAGCCTCAGGGATC 1400790 Query 48491 TGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCAGCA 48550 || || || ||||| ||| | || ||||| ||||| || ||||| || ||||| Sbjct 1400789 TGGACCTCACCACTGAATCGCTCGACGAGGTTCTCGTTGACGATACCATCAGAGGCAGCG 1400730 Query 48551 AAGAAGGCAAGGA 48563 ||||| ||||||| Sbjct 1400729 AAGAAAGCAAGGA 1400717 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931531018443520