Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20pininemorale_20[genbank_20GCA_5F002165215.1_202017-06-02] 153 sequences; 47,778,485 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq5 223 6e-53 seq7 190 4e-43 >seq5 Length=2590615 Score = 223 bits (246), Expect = 6e-53 Identities = 802/1228 (65%), Gaps = 55/1228 (4%) Strand=Plus/Plus Query 221417 GTCAGGGCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTG-GCCTCGGG 221475 || ||||||||||| || |||||||| |||||| ||||||||| ||| | |||||||| Sbjct 1618320 GTGAGGGCAGCGTGATAAATGGTCTCGAAGATCTGCTTGTTGAG-CTCACGAGCCTCGGG 1618378 Query 221476 AGAAGTGAAGGGCATACGCAGCATCT--GAAAGACGTCGGCCAGTCCCTGTACTCCGATA 221533 || ||||||||||||||| | | ||||| | ||||| || ||||| || || | | Sbjct 1618379 TGACTCGAAGGGCATACGCAG-AGCAAGGAAAG-CATCGGCGAGGCCCTGAACACCCAGA 1618436 Query 221534 CCGATGGGCCTGTGTCTCCTGTTG--GAAGCGGCCGCTTCTGGCACGGGATAAAAGTTGA 221591 || ||||| | ||| | | |||| | ||| | || |||| || || || ||| | Sbjct 1618437 CCAATGGGTCGGTGGCGCATGTTACTGTTGCGAGC-CTCCTGG-ACAGGGTAGTGGTTCA 1618494 Query 221592 CGTCGATCAGATTGTTGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCTGGT 221651 | ||||| | ||||| | ||| || | | || | | |||| | || ||||| | Sbjct 1618495 CATCGATGATCTTGTTCAAGTTGCGAATAACAACCTGACTGACCTTGTGCAACTTCTTGA 1618554 Query 221652 GATTGAACACCAACTCGCCGCCGTCGTGGAGGGGTTCCACAAAAGCGTTTAGGGCAACGC 221711 | | | ||| | | ||| || || | || | | || | | Sbjct 1618555 AGTCGTAG--CAAG-CTTCATCGTAGTTGATG---------AAGGAGGGCAGAGACAGAG 1618602 Query 221712 TGGCCAGGTTACACACGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTACAGA 221771 ||| ||||| || || || |||||||| |||| || || || || || | Sbjct 1618603 AGGCAAGGTTGCAGACAGCGACCTCGTCAGGAGCACAGTACTCGATAATTTCAGTGCAAA 1618662 Query 221772 GGTTGCTGCACTTGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCGTCCT 221831 ||||| || |||||| || |||| || || || |||||| || || |||| Sbjct 1618663 GGTTGGAGCTTCGGATGGTACCGAGGTTCTTTTGGTTGCTCTTGCGGTTACAGGCATCCT 1618722 Query 221832 TGTAGAGCATAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCCAGAGTT 221891 |||||||||| || || || ||||| ||| ||| | ||||| || ||| || | Sbjct 1618723 TGTAGAGCATGAATGGGTTTCCGGTCTCAGTCTGGGCCTCGAGAATGGCGTACCAAAGCT 1618782 Query 221892 CTCTG-GCGCTCACCGTCCT------CTTGACTGCACCCTCGGTCTTTTCATACCCGGTA 221944 |||| || | | ||| | |||| | | |||| |||||| ||| Sbjct 1618783 -TCTGAGCCTTGATTGTCTTGCGACCCTTGCCCTCCTTCTCGTACTTTTCGTAC------ 1618835 Query 221945 TAGAGCATGTCAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGACAC 222004 ||||| | | |||| || ||||| ||| | ||||| || ||| | ||||||| Sbjct 1618836 -AGAGCCT--CGAACTCCTCTCCGTAGCAGTCGGCGAGGCCAGGGCACTCGTTGGGACAC 1618892 Query 222005 ATCAGACTCCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAGC 222064 ||||| |||||| ||| | || || | || |||||| || || |||||||| || Sbjct 1618893 ATCAGTGTCCAGTCACCGTTCTTTTCAACACGCTTCATGAAAAGATCAGGGATCCAAAGG 1618952 Query 222065 GCCTGAAAGAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAA 222124 || | || ||||| | || || ||||||| |||| ||| || | ||||| | Sbjct 1618953 GCGAGGAAAAGATCACGGGCACGGACCTCCTCCTTACCGTGGTTCTTACGGAGATCAAGG 1619012 Query 222125 AACTCAAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCTTG 222184 || || || | |||| |||||| ||||| || |||| ||| | ||| |||||||||||| Sbjct 1619013 AAATCGAAGACATCAGAGTGCCAAGGCTCGAGGTAGATGGCAAAAGCACCGGGTCGCTTG 1619072 Query 222185 TTGCCACCCTGATCCACCATCCTCTCCAGAG-CGTTGAAGATGCGAAGGGTCGGTACCAG 222243 ||||||||||| || | ||| | ||| | |||||||| ||||| | || || | Sbjct 1619073 TTGCCACCCTGGTCGA-CATACCGAGCAGTGTTGTTGAAGACACGAAGCATAGGAACAAC 1619131 Query 222244 TCCGTTGGATCGACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGTTACTG-G 222302 || || ||| ||||||||| || ||||| | || || | | ||| | | Sbjct 1619132 ACCATTCGATGTACCGTTGGTACCGGCGATGTATGAGCCAGTAGCAC---GAATACGGTG 1619188 Query 222303 CAGA--CATGCCGATACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTGTC 222360 || | | || |||||||| || || ||||||||||| ||| |||||||||| || Sbjct 1619189 CACATTTAGACCAATACCACCAGCCATCTTGGAGATCATGGCACAGGTCTTGAGAGTATC 1619248 Query 222361 CATGATGCCCTCCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCTGAGA 222420 ||| ||||| ||| ||| ||||| | | | || || ||||| |||| || | Sbjct 1619249 GTAGATTCCCTCAATACTGTCGTCCTTCATATCAACCAAGAAGCAAGATGACAATTGGGG 1619308 Query 222421 TTTGGTGGAACAGGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGCCCCTAGACAT 222480 | | || | ||| || || |||||||| || || || ||| | |||||||| Sbjct 1619309 CTGAGGGGTGCCGGCATTGAAGAGCGTGGGGGAAGCATGCGTGAAGAACTTGCTAGACAT 1619368 Query 222481 CAGATCGTACGTCTCTACGACTCTGGCGATGTTGTC-CCCGTGA-ATCTGCATGGCGCAT 222538 ||||| ||| ||||| | ||||| |||| | || ||| || | | || | | || Sbjct 1619369 CAGATTGTATGTCTCCAAGACTCGCTCGATATCATCACCCCAGATACCAACA-GACACA- 1619426 Query 222539 CTCATGTACATGTACTGGGGCCTCTCCACA--GGACCCTTGGAGCTGGAGAGCAGGTACG 222596 | |||| ||||| ||| || | ||| ||| || | | || ||| ||||| | Sbjct 1619427 CGCATGATCATGTGCTGAGGGCGCTCGACAATCTTACCGTCAATCT--TGAGGAGGTATG 1619484 Query 222597 ATTTTTCCAGAGTCTTGAACCCAAAGTA 222624 || |||| ||||||||| |||||||| Sbjct 1619485 ATCGCTCCAAAGTCTTGAAGCCAAAGTA 1619512 >seq7 Length=1585612 Score = 190 bits (210), Expect = 4e-43 Identities = 386/569 (68%), Gaps = 7/569 (1%) Strand=Plus/Plus Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536 || ||| | ||||||||||||||| | || |||||| || || ||||||||||| Sbjct 1400593 ATTTGGCAAATGTACAAGAAGGCTGAGGCTTCCTTCTGGACTGCTGAGGAGATTGATCTC 1400652 Query 25537 GCCAAGGACATGGACGGCTGGTAC----GCTCTATCCAAAGACGAGCAGCATTTTCTCAA 25592 ||||||| | ||| |||| || || ||| | || |||||| ||| || Sbjct 1400653 TCCAAGGATCTCCACGACTGGAACAACCGC-CTAACTGCTGATGAGCAGTTCTTTGTCTC 1400711 Query 25593 GTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAG 25652 || | | || ||||| || |||||||||||||| || |||||||| || |||| | Sbjct 1400712 TCACATCCTTGCTTTCTTCGCTGCCTCTGATGGTATCGTCAACGAGAACCTCGTCGAGCG 1400771 Query 25653 ATTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGCCAT 25712 ||||| | || || ||| | ||||| || |||||||| |||||||| || Sbjct 1400772 ATTCAGTGGTGAGGTCCAGATCCCTGAGGCTCGTTGCTTCTACGGCTTCCAGATCATGAT 1400831 Query 25713 CGAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGATGACGTACATTACAGACGTCGC 25772 || || | || || ||| || || ||| | || ||||| | || ||| Sbjct 1400832 GGAGAACATTCATTCCGAGACCTACTCCCTCCTTATCGACACATACATCAAGGAGCCCGC 1400891 Query 25773 CGAGAGAGATCGGCTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGAAGGCGCG 25832 | || || || || ||||| ||| ||| ||| ||||| | |||||| Sbjct 1400892 CCAGCGAACCTATCTCTTCAACGCCATTGAGACCATTCCCTGCATCCGAAAGAAGGCTGA 1400951 Query 25833 GTGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACGTTTGGCGAGCGGCTGGTAGCCTT 25892 |||||||| |||||| | || | | | |||| | |||| || || ||||| Sbjct 1400952 CTGGGCCATCCGATGGATCCAGGATAAGGACTCCTCCTTTGCCCAGCGTCTCGTTGCCTT 1401011 Query 25893 TGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGCTCAAGCA 25952 ||||||||| ||||| ||||| ||||| ||| | || || | ||||||||||||||| | Sbjct 1401012 TGCTGCTGTTGAGGGTATCTTCTTCAGTGGTGCCTTCGCCTCTATCTTCTGGCTCAAGAA 1401071 Query 25953 GAAGGGGACCATGCCCGGGCTGTACTTT-TCCAACGAGCTCATCAGCAGGGACGAGGGTC 26011 | || |||||| || ||| ||||| ||||||||||||||| | |||||||||| Sbjct 1401072 GCGTGGTCTCATGCCTGGTCTG-ACTTTCTCCAACGAGCTCATCTCTCGTGACGAGGGTC 1401130 Query 26012 TCCACAGAGATTTTGCCTGCCTGCTCTAC 26040 | |||| || ||||| ||||| ||| || Sbjct 1401131 TTCACACTGACTTTGCATGCCTCCTCCAC 1401159 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928843023584320