Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20pininemorale_20[genbank_20GCA_5F002165215.1_202017-06-02]
153 sequences; 47,778,485 total letters
Query= NC_019495.1
Length=290304
Score E
Sequences producing significant alignments: (Bits) Value
seq5 223 6e-53
seq7 190 4e-43
>seq5
Length=2590615
Score = 223 bits (246), Expect = 6e-53
Identities = 802/1228 (65%), Gaps = 55/1228 (4%)
Strand=Plus/Plus
Query 221417 GTCAGGGCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTG-GCCTCGGG 221475
|| ||||||||||| || |||||||| |||||| ||||||||| ||| | ||||||||
Sbjct 1618320 GTGAGGGCAGCGTGATAAATGGTCTCGAAGATCTGCTTGTTGAG-CTCACGAGCCTCGGG 1618378
Query 221476 AGAAGTGAAGGGCATACGCAGCATCT--GAAAGACGTCGGCCAGTCCCTGTACTCCGATA 221533
|| ||||||||||||||| | | ||||| | ||||| || ||||| || || | |
Sbjct 1618379 TGACTCGAAGGGCATACGCAG-AGCAAGGAAAG-CATCGGCGAGGCCCTGAACACCCAGA 1618436
Query 221534 CCGATGGGCCTGTGTCTCCTGTTG--GAAGCGGCCGCTTCTGGCACGGGATAAAAGTTGA 221591
|| ||||| | ||| | | |||| | ||| | || |||| || || || ||| |
Sbjct 1618437 CCAATGGGTCGGTGGCGCATGTTACTGTTGCGAGC-CTCCTGG-ACAGGGTAGTGGTTCA 1618494
Query 221592 CGTCGATCAGATTGTTGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCTGGT 221651
| ||||| | ||||| | ||| || | | || | | |||| | || ||||| |
Sbjct 1618495 CATCGATGATCTTGTTCAAGTTGCGAATAACAACCTGACTGACCTTGTGCAACTTCTTGA 1618554
Query 221652 GATTGAACACCAACTCGCCGCCGTCGTGGAGGGGTTCCACAAAAGCGTTTAGGGCAACGC 221711
| | | ||| | | ||| || || | || | | || | |
Sbjct 1618555 AGTCGTAG--CAAG-CTTCATCGTAGTTGATG---------AAGGAGGGCAGAGACAGAG 1618602
Query 221712 TGGCCAGGTTACACACGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTACAGA 221771
||| ||||| || || || |||||||| |||| || || || || || |
Sbjct 1618603 AGGCAAGGTTGCAGACAGCGACCTCGTCAGGAGCACAGTACTCGATAATTTCAGTGCAAA 1618662
Query 221772 GGTTGCTGCACTTGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCGTCCT 221831
||||| || |||||| || |||| || || || |||||| || || ||||
Sbjct 1618663 GGTTGGAGCTTCGGATGGTACCGAGGTTCTTTTGGTTGCTCTTGCGGTTACAGGCATCCT 1618722
Query 221832 TGTAGAGCATAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCCAGAGTT 221891
|||||||||| || || || ||||| ||| ||| | ||||| || ||| || |
Sbjct 1618723 TGTAGAGCATGAATGGGTTTCCGGTCTCAGTCTGGGCCTCGAGAATGGCGTACCAAAGCT 1618782
Query 221892 CTCTG-GCGCTCACCGTCCT------CTTGACTGCACCCTCGGTCTTTTCATACCCGGTA 221944
|||| || | | ||| | |||| | | |||| |||||| |||
Sbjct 1618783 -TCTGAGCCTTGATTGTCTTGCGACCCTTGCCCTCCTTCTCGTACTTTTCGTAC------ 1618835
Query 221945 TAGAGCATGTCAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGACAC 222004
||||| | | |||| || ||||| ||| | ||||| || ||| | |||||||
Sbjct 1618836 -AGAGCCT--CGAACTCCTCTCCGTAGCAGTCGGCGAGGCCAGGGCACTCGTTGGGACAC 1618892
Query 222005 ATCAGACTCCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAGC 222064
||||| |||||| ||| | || || | || |||||| || || |||||||| ||
Sbjct 1618893 ATCAGTGTCCAGTCACCGTTCTTTTCAACACGCTTCATGAAAAGATCAGGGATCCAAAGG 1618952
Query 222065 GCCTGAAAGAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAA 222124
|| | || ||||| | || || ||||||| |||| ||| || | ||||| |
Sbjct 1618953 GCGAGGAAAAGATCACGGGCACGGACCTCCTCCTTACCGTGGTTCTTACGGAGATCAAGG 1619012
Query 222125 AACTCAAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCTTG 222184
|| || || | |||| |||||| ||||| || |||| ||| | ||| ||||||||||||
Sbjct 1619013 AAATCGAAGACATCAGAGTGCCAAGGCTCGAGGTAGATGGCAAAAGCACCGGGTCGCTTG 1619072
Query 222185 TTGCCACCCTGATCCACCATCCTCTCCAGAG-CGTTGAAGATGCGAAGGGTCGGTACCAG 222243
||||||||||| || | ||| | ||| | |||||||| ||||| | || || |
Sbjct 1619073 TTGCCACCCTGGTCGA-CATACCGAGCAGTGTTGTTGAAGACACGAAGCATAGGAACAAC 1619131
Query 222244 TCCGTTGGATCGACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGTTACTG-G 222302
|| || ||| ||||||||| || ||||| | || || | | ||| | |
Sbjct 1619132 ACCATTCGATGTACCGTTGGTACCGGCGATGTATGAGCCAGTAGCAC---GAATACGGTG 1619188
Query 222303 CAGA--CATGCCGATACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTGTC 222360
|| | | || |||||||| || || ||||||||||| ||| |||||||||| ||
Sbjct 1619189 CACATTTAGACCAATACCACCAGCCATCTTGGAGATCATGGCACAGGTCTTGAGAGTATC 1619248
Query 222361 CATGATGCCCTCCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCTGAGA 222420
||| ||||| ||| ||| ||||| | | | || || ||||| |||| || |
Sbjct 1619249 GTAGATTCCCTCAATACTGTCGTCCTTCATATCAACCAAGAAGCAAGATGACAATTGGGG 1619308
Query 222421 TTTGGTGGAACAGGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGCCCCTAGACAT 222480
| | || | ||| || || |||||||| || || || ||| | ||||||||
Sbjct 1619309 CTGAGGGGTGCCGGCATTGAAGAGCGTGGGGGAAGCATGCGTGAAGAACTTGCTAGACAT 1619368
Query 222481 CAGATCGTACGTCTCTACGACTCTGGCGATGTTGTC-CCCGTGA-ATCTGCATGGCGCAT 222538
||||| ||| ||||| | ||||| |||| | || ||| || | | || | | ||
Sbjct 1619369 CAGATTGTATGTCTCCAAGACTCGCTCGATATCATCACCCCAGATACCAACA-GACACA- 1619426
Query 222539 CTCATGTACATGTACTGGGGCCTCTCCACA--GGACCCTTGGAGCTGGAGAGCAGGTACG 222596
| |||| ||||| ||| || | ||| ||| || | | || ||| ||||| |
Sbjct 1619427 CGCATGATCATGTGCTGAGGGCGCTCGACAATCTTACCGTCAATCT--TGAGGAGGTATG 1619484
Query 222597 ATTTTTCCAGAGTCTTGAACCCAAAGTA 222624
|| |||| ||||||||| ||||||||
Sbjct 1619485 ATCGCTCCAAAGTCTTGAAGCCAAAGTA 1619512
>seq7
Length=1585612
Score = 190 bits (210), Expect = 4e-43
Identities = 386/569 (68%), Gaps = 7/569 (1%)
Strand=Plus/Plus
Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536
|| ||| | ||||||||||||||| | || |||||| || || |||||||||||
Sbjct 1400593 ATTTGGCAAATGTACAAGAAGGCTGAGGCTTCCTTCTGGACTGCTGAGGAGATTGATCTC 1400652
Query 25537 GCCAAGGACATGGACGGCTGGTAC----GCTCTATCCAAAGACGAGCAGCATTTTCTCAA 25592
||||||| | ||| |||| || || ||| | || |||||| ||| ||
Sbjct 1400653 TCCAAGGATCTCCACGACTGGAACAACCGC-CTAACTGCTGATGAGCAGTTCTTTGTCTC 1400711
Query 25593 GTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAG 25652
|| | | || ||||| || |||||||||||||| || |||||||| || |||| |
Sbjct 1400712 TCACATCCTTGCTTTCTTCGCTGCCTCTGATGGTATCGTCAACGAGAACCTCGTCGAGCG 1400771
Query 25653 ATTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGCCAT 25712
||||| | || || ||| | ||||| || |||||||| |||||||| ||
Sbjct 1400772 ATTCAGTGGTGAGGTCCAGATCCCTGAGGCTCGTTGCTTCTACGGCTTCCAGATCATGAT 1400831
Query 25713 CGAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGATGACGTACATTACAGACGTCGC 25772
|| || | || || ||| || || ||| | || ||||| | || |||
Sbjct 1400832 GGAGAACATTCATTCCGAGACCTACTCCCTCCTTATCGACACATACATCAAGGAGCCCGC 1400891
Query 25773 CGAGAGAGATCGGCTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGAAGGCGCG 25832
| || || || || ||||| ||| ||| ||| ||||| | ||||||
Sbjct 1400892 CCAGCGAACCTATCTCTTCAACGCCATTGAGACCATTCCCTGCATCCGAAAGAAGGCTGA 1400951
Query 25833 GTGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACGTTTGGCGAGCGGCTGGTAGCCTT 25892
|||||||| |||||| | || | | | |||| | |||| || || |||||
Sbjct 1400952 CTGGGCCATCCGATGGATCCAGGATAAGGACTCCTCCTTTGCCCAGCGTCTCGTTGCCTT 1401011
Query 25893 TGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGCTCAAGCA 25952
||||||||| ||||| ||||| ||||| ||| | || || | ||||||||||||||| |
Sbjct 1401012 TGCTGCTGTTGAGGGTATCTTCTTCAGTGGTGCCTTCGCCTCTATCTTCTGGCTCAAGAA 1401071
Query 25953 GAAGGGGACCATGCCCGGGCTGTACTTT-TCCAACGAGCTCATCAGCAGGGACGAGGGTC 26011
| || |||||| || ||| ||||| ||||||||||||||| | ||||||||||
Sbjct 1401072 GCGTGGTCTCATGCCTGGTCTG-ACTTTCTCCAACGAGCTCATCTCTCGTGACGAGGGTC 1401130
Query 26012 TCCACAGAGATTTTGCCTGCCTGCTCTAC 26040
| |||| || ||||| ||||| ||| ||
Sbjct 1401131 TTCACACTGACTTTGCATGCCTCCTCCAC 1401159
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 928843023584320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |