Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20pininemorale_20[genbank_20GCA_5F002165215.1_202017-06-02] 153 sequences; 47,778,485 total letters Query= NC_020486.1 Length=171211 Score E Sequences producing significant alignments: (Bits) Value seq34 105 7e-18 >seq34 Length=373799 Score = 105 bits (116), Expect = 7e-18 Identities = 158/222 (71%), Gaps = 2/222 (1%) Strand=Plus/Minus Query 158341 TACATCCTTGACGCAGCTGAGGAAGCGGGTGTCGAACTCAATTACTCGTGCCGTGCAGGC 158400 ||||||||||| |||||||||||| || | ||| | ||| || ||||| ||||| Sbjct 95848 TACATCCTTGATGCAGCTGAGGAAAACGGCTTAGAATTGCCTTATTCTTGCCGGGCAGGG 95789 Query 158401 GCTTGTTCGTCGTGTGCGGGAAAACTCGTCTCTGGCACCGTAGACCAAAGCGACCAGTCC 158460 ||||| || | ||| | || ||||||||||| || || || || |||||||| || | Sbjct 95788 GCTTGCTCTACTTGTACAGGCAAACTCGTCTCGGGAACAGTCGATCAAAGCGATCAAAGC 95729 Query 158461 TTCCTGGACGATGACCAAATCGATTCTGGTTTCATTCTGACT-TGTGTTTCTTATCCTAC 158519 || | || || ||||| || || | || | | || ||| ||||| ||||||| || Sbjct 95728 TTTTTAGATGACGACCAGATAGAGGCAGGGTATGTCCT-ACTCTGTGTCGCTTATCCGAC 95670 Query 158520 AAGTGATTGTGTGATTGAGACTGACAAGGAAGAGGAACTGTA 158561 || || || || || | | | | |||||||||| ||||| Sbjct 95669 TAGCGACTGCGTTATAAAAAGTCATGAGGAAGAGGATCTGTA 95628 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547746152433480