Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20pininemorale_20[genbank_20GCA_5F002165215.1_202017-06-02]
153 sequences; 47,778,485 total letters
Query= NC_020486.1
Length=171211
Score E
Sequences producing significant alignments: (Bits) Value
seq34 105 7e-18
>seq34
Length=373799
Score = 105 bits (116), Expect = 7e-18
Identities = 158/222 (71%), Gaps = 2/222 (1%)
Strand=Plus/Minus
Query 158341 TACATCCTTGACGCAGCTGAGGAAGCGGGTGTCGAACTCAATTACTCGTGCCGTGCAGGC 158400
||||||||||| |||||||||||| || | ||| | ||| || ||||| |||||
Sbjct 95848 TACATCCTTGATGCAGCTGAGGAAAACGGCTTAGAATTGCCTTATTCTTGCCGGGCAGGG 95789
Query 158401 GCTTGTTCGTCGTGTGCGGGAAAACTCGTCTCTGGCACCGTAGACCAAAGCGACCAGTCC 158460
||||| || | ||| | || ||||||||||| || || || || |||||||| || |
Sbjct 95788 GCTTGCTCTACTTGTACAGGCAAACTCGTCTCGGGAACAGTCGATCAAAGCGATCAAAGC 95729
Query 158461 TTCCTGGACGATGACCAAATCGATTCTGGTTTCATTCTGACT-TGTGTTTCTTATCCTAC 158519
|| | || || ||||| || || | || | | || ||| ||||| ||||||| ||
Sbjct 95728 TTTTTAGATGACGACCAGATAGAGGCAGGGTATGTCCT-ACTCTGTGTCGCTTATCCGAC 95670
Query 158520 AAGTGATTGTGTGATTGAGACTGACAAGGAAGAGGAACTGTA 158561
|| || || || || | | | | |||||||||| |||||
Sbjct 95669 TAGCGACTGCGTTATAAAAAGTCATGAGGAAGAGGATCTGTA 95628
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 547746152433480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |