Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20pininemorale_20[genbank_20GCA_5F002165215.1_202017-06-02]
153 sequences; 47,778,485 total letters
Query= NC_020845.1
Length=180977
Score E
Sequences producing significant alignments: (Bits) Value
seq6 123 3e-23
>seq6
Length=2559796
Score = 123 bits (136), Expect = 3e-23
Identities = 271/404 (67%), Gaps = 3/404 (1%)
Strand=Plus/Plus
Query 138183 ACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGTGGAATACAGAATGTCTTATGT 138242
||| | ||||| || || || ||||| ||||| || || ||||||||||| ||||| ||
Sbjct 1534021 ACAGCGATAGGGCCAACACCGGGACCACCACCGCCGTGAGGAATACAGAAGGTCTTGTGG 1534080
Query 138243 AAATTTAGATGACATACATCTGCACCATAGTCACATGGTTTTGCTAGACCTACCTGTGCA 138302
| || ||||| || ||||| |||||| ||||| || | ||||| | ||| ||
Sbjct 1534081 AGGTTGAGATGGCAGACATCGGCACCAATGTCACCGGGGCTGCAGAGACCAATCTGAGCG 1534140
Query 138303 TTTAGATTTGCACCATCGAGATATACCTGACCACCATTGTCATGAACGATCTTACATATC 138362
|| | || || || || | || || |||| |||| || || || | | ||| |
Sbjct 1534141 TTCATGTTGGCGCCGTCCATGTAGACAAGACCGCCATGCTCGTGGACAAGATCACAGACT 1534200
Query 138363 TGTCTGATGTTTGTTTCAAATACACCATGAGTCGATGGATATGTAATCATAATACATGAG 138422
|| |||| | | || || ||||| ||| || ||||| |||| ||| ||| |
Sbjct 1534201 TGCTTGATCTCAGGCTCGAAGACACCGAAAGTAGAGGGATAAGTAACCATGATAGCAGCA 1534260
Query 138423 AGTTCAAATGTATTCATGATTGCTTTCTTCTCTAGATCTTTGATGTCTATGTTGCCA-TC 138481
|| ||| | | | ||| || || ||||| | ||| || | ||| ||| ||
Sbjct 1534261 AGCTCATCAGCGTGCTTGACGCACTTGGCCTTGAGATCCTCGATATCCAAGTTACCAGTC 1534320
Query 138482 AT--CATCACACTTGACACCTACAACTTTCATTCCTGCCATGACTGCACTAGCAGGATTA 138539
| | |||||||||||| ||||| ||||| || |||||| | ||| |||||| ||
Sbjct 1534321 TTGCCGTCACACTTGACAGTAACAACCTTCATACCAGCCATGGCAGCAGAAGCAGGGTTG 1534380
Query 138540 GTTCCATGTGCTGACTCTGGTATCAGACATACATTTCTTTTATC 138583
|| || || || || | || || ||||| || |||| |||||
Sbjct 1534381 GTACCGTGAGCAGAAACCGGGATAAGACAGACCTTTCGCTTATC 1534424
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 578997292665560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |