Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20pininemorale_20[genbank_20GCA_5F002165215.1_202017-06-02] 153 sequences; 47,778,485 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq6 123 3e-23 >seq6 Length=2559796 Score = 123 bits (136), Expect = 3e-23 Identities = 271/404 (67%), Gaps = 3/404 (1%) Strand=Plus/Plus Query 138183 ACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGTGGAATACAGAATGTCTTATGT 138242 ||| | ||||| || || || ||||| ||||| || || ||||||||||| ||||| || Sbjct 1534021 ACAGCGATAGGGCCAACACCGGGACCACCACCGCCGTGAGGAATACAGAAGGTCTTGTGG 1534080 Query 138243 AAATTTAGATGACATACATCTGCACCATAGTCACATGGTTTTGCTAGACCTACCTGTGCA 138302 | || ||||| || ||||| |||||| ||||| || | ||||| | ||| || Sbjct 1534081 AGGTTGAGATGGCAGACATCGGCACCAATGTCACCGGGGCTGCAGAGACCAATCTGAGCG 1534140 Query 138303 TTTAGATTTGCACCATCGAGATATACCTGACCACCATTGTCATGAACGATCTTACATATC 138362 || | || || || || | || || |||| |||| || || || | | ||| | Sbjct 1534141 TTCATGTTGGCGCCGTCCATGTAGACAAGACCGCCATGCTCGTGGACAAGATCACAGACT 1534200 Query 138363 TGTCTGATGTTTGTTTCAAATACACCATGAGTCGATGGATATGTAATCATAATACATGAG 138422 || |||| | | || || ||||| ||| || ||||| |||| ||| ||| | Sbjct 1534201 TGCTTGATCTCAGGCTCGAAGACACCGAAAGTAGAGGGATAAGTAACCATGATAGCAGCA 1534260 Query 138423 AGTTCAAATGTATTCATGATTGCTTTCTTCTCTAGATCTTTGATGTCTATGTTGCCA-TC 138481 || ||| | | | ||| || || ||||| | ||| || | ||| ||| || Sbjct 1534261 AGCTCATCAGCGTGCTTGACGCACTTGGCCTTGAGATCCTCGATATCCAAGTTACCAGTC 1534320 Query 138482 AT--CATCACACTTGACACCTACAACTTTCATTCCTGCCATGACTGCACTAGCAGGATTA 138539 | | |||||||||||| ||||| ||||| || |||||| | ||| |||||| || Sbjct 1534321 TTGCCGTCACACTTGACAGTAACAACCTTCATACCAGCCATGGCAGCAGAAGCAGGGTTG 1534380 Query 138540 GTTCCATGTGCTGACTCTGGTATCAGACATACATTTCTTTTATC 138583 || || || || || | || || ||||| || |||| ||||| Sbjct 1534381 GTACCGTGAGCAGAAACCGGGATAAGACAGACCTTTCGCTTATC 1534424 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578997292665560