Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20pininemorale_20[genbank_20GCA_5F002165215.1_202017-06-02] 153 sequences; 47,778,485 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq5 241 2e-58 seq7 131 2e-25 seq1 91.5 2e-13 >seq5 Length=2590615 Score = 241 bits (266), Expect = 2e-58 Identities = 1147/1783 (64%), Gaps = 55/1783 (3%) Strand=Plus/Minus Query 75211 CCCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGT 75270 ||| ||| ||||| ||||||| || | | || ||| || || || || || || Sbjct 1619447 CCCTCAGCACATGATCATGCGTGTGTCTGTTGGTATCTGGGGTGATGATATCGAGCGAGT 1619388 Query 75271 CTTGGAGACATACGACAAGATGTCC--CAAGGTATGTTCATTCACGCAACACCAACCCTC 75328 ||||||||||||| | |||||| |||| | | ||| || || | || || ||| Sbjct 1619387 CTTGGAGACATACAATCTGATGTCTAGCAAGTTCT--TCACGCATGCTTCCCCCACGCTC 1619330 Query 75329 TTCAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAG 75388 |||||||| || || || || || |||| ||||||| | | | | ||||| Sbjct 1619329 TTCAATGCCGGCACCCCTCAGCCCCAATTGTCATCTTGCTTCTTGGTTGATATGAAGGAC 1619270 Query 75389 GACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCT 75448 ||| || | || ||||| | ||||| | | ||||| ||||| ||| |||| Sbjct 1619269 GACAGTATTGAGGGAATCTACGATACTCTCAAGACCTGTGCCATGATCTCCAAGATGGCT 1619210 Query 75449 GGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTAT-TCGGGGG-A 75506 || |||||||| | | | || | | | || | | ||| || ||| || | Sbjct 1619209 GGTGGTATTGGTCTAAATGTGCACCGTATTCGTGCTACTGG--CTCATACATCGCCGGTA 1619152 Query 75507 CAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCT 75566 | || ||| ||| ||||| || |||| |||||||| || || ||| ||| || || | Sbjct 1619151 CCAACGGTACATCGAATGGTGTTGTTCCTATGCTTCGTGTCTTCAACAACACTGCTCGGT 1619092 Query 75567 ATGTAAATCAAGCGGGGCGTC--GCAAGG-GGTCCATC-GCGGTCTACTTGGAACCATGG 75622 |||| | || | | ||| | || | ||| | | || ||||| | || || ||| Sbjct 1619091 ATGTCGACCAGG-GTGGCAACAAGCGACCCGGTGCTTTTGCCATCTACCTCGAGCCTTGG 1619033 Query 75623 CATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGG 75682 || | ||| || | || |||||||| | || ||||| ||| | || |||| || | Sbjct 1619032 CACTCTGATGTCTTCGATTTCCTTGATCTCCGTAAGAACCACGGTAAGGAGGAGG-TCCG 1618974 Query 75683 TGTA-GAGATCTCTTTTCATC--CCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAG 75739 || | ||||| |||| || ||| ||||| || || |||||||||||||| ||||| Sbjct 1618973 TGCCCGTGATCT--TTTCCTCGCCCTTTGGATCCCTGATCTTTTCATGAAGCGTGTTGAA 1618916 Query 75740 GAGGGTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGTG 75799 || ||| | ||| | || | ||||| || || || || ||| ||||| Sbjct 1618915 AAGAACGGTGACTGGACACTGATGTGTCCCAACGAGTGCCCTGGCCTCGCCGACTGCTAC 1618856 Query 75800 GGTGAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGC---CAATGCG 75856 || |||||||| || || || ||| |||||| || ||||||| | | ||| | Sbjct 1618855 GGAGAGGAGTTCGAGGCTCTGTACGAAAAGTACGAGAAGGAGGGCAAGGGTCGCAA---G 1618799 Query 75857 ACTGTACCAGCCGCCGATG-TTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAAC 75915 || | | || | | || | ||||| | || |||||| | | ||||| ||||| |||| Sbjct 1618798 ACAAT-CAAGGCTCAGAAGCTTTGGTACGCCATTCTCGAGGCCCAGACTGAGACCGGAAA 1618740 Query 75916 ACCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAAC 75975 |||| ||||| ||||||||||| |||||| ||||| ||||||||||| | || || Sbjct 1618739 CCCATTCATGCTCTACAAGGATGCCTGTAACCGCAAGAGCAACCAAAAGAACCTCGGTAC 1618680 Query 75976 AATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGC 76035 ||| ||||| || |||||||| |||||| | |||||| | | || ||| || Sbjct 1618679 CATCCGAAGCTCCAACCTTTGCACTGAAATTATCGAGTACTGTGCTCCTGACGAGGTCGC 1618620 Query 76036 TGTTTGCAATTTGGCATCAATCGCCCTTCCAAAGTATGTCAATGAAGA-GA--CTCGCAC 76092 ||| ||||| | || || | | || || | |||| | || || || || Sbjct 1618619 TGTCTGCAACCTTGCCTCTCTGTCTCTGCCCTCCTTCATCAACTACGATGAAGCTTGC-- 1618562 Query 76093 TTTTGATTATGAAAAACTT-CATGAAATCACAAAGATTGTTACCAAAAATCTAAACCGAG 76151 | || | | || || || || | ||| || |||||| || | ||| Sbjct 1618561 -TACGACT-TCAAGAAGTTGCACAAGGTCAGTCAGGTTGTTATTCGCAACTTGAACAAGA 1618504 Query 76152 TCATTGACAGAAATTTTTATCCCGTTGAGACTGCGCGAAAGTCTAATATGCGACACAGAC 76211 |||| || || || || || || || || || ||| ||||| ||| ||| Sbjct 1618503 TCATCGATGTGAACCACTACCCTGTCCAGGAGGCTCGCAACAGTAACATGCGCCACCGAC 1618444 Query 76212 CTATTGGTTTGGGTGTTCAAGGTCTCGCGGATGTATTTATTT-TGTGCCGCTACGCATTT 76270 | |||||| |||||||||| || ||||| |||| || || | ||| | | | || Sbjct 1618443 CCATTGGTCTGGGTGTTCAGGGCCTCGCCGATGCTTTCCTTGCTCTGCGTATGCCC-TTC 1618385 Query 76271 GATTCAGATGAAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCACGCATCC 76330 || ||| || || ||| | || | ||||| || ||||| |||||||| || Sbjct 1618384 GAGTCACCCGAGGCTCGTGAGCTCAACAAGCAGATCTTCGAGACCATTTATCACGCTGCC 1618325 Query 76331 CTGGAGGCGAGTTGTGAAT-TGGCTGAAGCCCAAGGTTCCTATGAGACATTTGAGGGTTC 76389 || || ||| | ||||| | | | ||| |||| || || ||||||| Sbjct 1618324 CTCACTGCCTCC-GTGCAGCTGGCTAAGGAGGAGGGTCCCTACTCCACCTTCAAGGGTTC 1618266 Query 76390 TCCCGCGTCCCAAGGGGTGCTTCAGTTTGATATGTGGGAAGGTGAAACCAAGCTCAACTA 76449 ||||| || | || | || |||||||| |||||| || || ||||| || | || Sbjct 1618265 CCCCGCCTCTGAGGGTATCCTCCAGTTTGACATGTGG-AACGTCAAACCCT-CTGACCTC 1618208 Query 76450 CG--ACTGGGA---TGTTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTT 76504 | ||||||| | ||| ||||| ||||| | || | ||||||||||| Sbjct 1618207 TGGGACTGGGAGACTCTTCGAGAGGAAG---TCAAGACACACGGCATCCGTAACAGTCTG 1618151 Query 76505 TTGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTT 76564 | | || || ||||| || ||| ||| | || || ||||||| || || ||||| Sbjct 1618150 CTCCTTGCTCCTATGCCTACTGCCAGTACCTCCCAGATTCTGGGTAACAACGAGTGCTTC 1618091 Query 76565 GAACCATACACAACAAACATCTACCTGAGAAGAACCCTCGCAGGTGAGTTTGTCATTGTC 76624 || || ||||| | || ||||||| | | ||||| |||||||| ||||| Sbjct 1618090 GAGCCCTACACCTCCAATATCTACCAACGCCGTGTTCTCGCTGGTGAGTTCCAGGTTGTC 1618031 Query 76625 AACAAGCACCTCGTCAATGACCTCAAGAAGATTGGTCTCTGGTCCAAGGATATGAAGGAT 76684 ||| || |||| ||||| | || ||||| |||||| | | ||||||| | Sbjct 1618030 AACCCCTGGCTGCTCAAGGACCTTGTCGACATGGGTCTGTGGTCCGATGCTATGAAGAAC 1617971 Query 76685 CTCATGGTGAAAGCGGGTGGTTCCATTCAAAATATCTCAGATATCCCAGATGATATCAAG 76744 | ||| | | | |||||||||||| || || | | ||||| | || ||||| Sbjct 1617970 CGCATCATTGCTGAGAATGGTTCCATTCAGAACATTCCCAACATCCCTGCCGACGTCAAG 1617911 Query 76745 AATCTCTACCGCACAGTGTGGGAAATCAAGATGAAAGATGTCATTGACATGGCCGCAGAT 76804 ||| ||| || || ||||| ||| | | ||| || | ||||| || ||| Sbjct 1617910 GCTCTGTACAAGACTGTCTGGGAGATCTCTCAGCGCCAGGTCGTTCAGATGGCTGCTGAT 1617851 Query 76805 CGTGGTCGCTTCATTGATCAAAGTCAAAGT--ATGAATCTATTCATGGAAAGTCCAACGA 76862 || ||| ||||||||||| |||| ||| |||| | |||| | || |||| Sbjct 1617850 CGAGGTGCCTTCATTGATC--AGTCCCAGTCACTGAACATCCACATGAAGGACCCCACGA 1617793 Query 76863 TGTCCAAGCTCTCTTCTATGCA-TATGTACGCGTGGAAACAGGGGCTCAAAACCGGAATG 76921 || |||| || | ||||| | || | || ||||||| || ||||| ||||| ||| Sbjct 1617792 TGGGCAAGATCACCAGCATGCACTTTGCAGGC-TGGAAACTTGGCCTCAAGACCGGCATG 1617734 Query 76922 TACTATCTCCGATCAAAGGCGAAAGCCCGACCAATTCAGTTCA 76964 ||||| || || || |||| || || |||||||||| Sbjct 1617733 TACTACCTTCGTACACAGGCTGCTGCTGCTCCTATTCAGTTCA 1617691 >seq7 Length=1585612 Score = 131 bits (144), Expect = 2e-25 Identities = 334/503 (66%), Gaps = 18/503 (4%) Strand=Plus/Plus Query 65023 AAGAAGGCGAAATGGGCAATGAAATGGTTTGAC-ACAAAGTCTCGCTCCTTCGCCGAGCG 65081 |||||||| | ||||| || |||| | | | || | ||| |||||| ||| |||| Sbjct 1400941 AAGAAGGCTGACTGGGCCATCCGATGGATCCAGGATAAGGACTC-CTCCTTTGCCCAGCG 1400999 Query 65082 CCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCATTCTGCGCTATTTA 65141 || |||| ||||| ||| ||||||||||||||| || | ||| | |||| | Sbjct 1401000 TCTCGTTGCCTTTGCTGCTGTTGAGGGTATCTTCTTCAGTGGTGCCTTCGCCTCTATCTT 1401059 Query 65142 TTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAATGAACTTATTTCCCG 65201 ||| | |||||||| ||||||||||| || || ||||| || || || || || || Sbjct 1401060 CTGGCTCAAGAAGCGTGGTCTCATGCCTGGTCTGACTTTCTCCAACGAGCTCATCTCTCG 1401119 Query 65202 AGATGAGGGTCTCCACCAGGAGTTTGCCGTGGAGCTCTTCAAGACTTTGCGTAA---TAG 65258 || |||||||| ||| || |||| | || ||| || | || | || | | Sbjct 1401120 TGACGAGGGTCTTCACACTGACTTTG-CATG--CCTCCTCCACTCTCACCTCAAGGGTCG 1401176 Query 65259 ACCCACTACCGAAACTATCCACGCCATCGTGAAAGAGGCGGTTGAGATTGAGAAAGGGTT 65318 ||| || | | ||||| | ||| | | || || || |||||| | | ||| Sbjct 1401177 TGCCAGTAAGCAGATGATCCAGGATATCATCACTGATGCCGTCACCATTGAGCAGGAGTT 1401236 Query 65319 CATCTTGGACGCACTCCCATGTAATCTCATCGGTATGAACTCTGAGAAGATGTCCGAGTA 65378 | || || || || || ||| ||| |||| ||||||||||| ||| |||| Sbjct 1401237 CCTCACCGAAGCTCTTCCCTGTGCCCTCCTCGGCATGAACTCTGACCTCATGAAGCAGTA 1401296 Query 65379 CATTGAGTATGTGTCGGATCGTCTCCTCAAACAAGTTGGGGTGCCACCCA-----TTTGG 65433 |||||||| || | ||||||||||| |||| || | | | | Sbjct 1401297 CATTGAGTTCGTCGCTGATCGTCTCCTTGTCGCTCTTGG-----CAACGAGAAGGTCTAC 1401351 Query 65434 AACGCGAAGAATCCATTTGACTTTATGGAAAACATTAGCCTTGATGGGAAGACCAACTTC 65493 || || | || || || ||||||||||| ||||| ||||| ||| |||||||||||| Sbjct 1401352 AAGGCCACCAACCCCTTCGACTTTATGGAGAACATCTCCCTTGGTGGCAAGACCAACTTC 1401411 Query 65494 TTTGAGAAGCGAGTTGGGGACTA 65516 || |||||||| |||| ||||| Sbjct 1401412 TTCGAGAAGCGTGTTGCCGACTA 1401434 >seq1 Length=6144005 Score = 91.5 bits (100), Expect = 2e-13 Identities = 124/173 (72%), Gaps = 0/173 (0%) Strand=Plus/Minus Query 27858 GCGCTCAAGGACAAGTTGTGCGATGCGATCCCCTTTCTTTACCTCAAAGTCTTTGTCTCC 27917 |||||| || |||||||| || ||||| || |||| ||| ||||||||||| || Sbjct 2285853 GCGCTCTAGAACAAGTTGAGCAATGCGGTCGCCTTCCTTCACCTCAAAGTCGGATTCGTT 2285794 Query 27918 GTGATTGAAGAGAACGACTTTGACTTCACCTGTATAGTCGGGATCAATAACACCCGCACC 27977 || |||||||| | ||| ||||||| ||| || |||| ||| || ||||| || || Sbjct 2285793 ATGGTTGAAGAGCAGGACCTTGACTTGACCACGGTAATCGGCATCGATGACACCAGCGCC 2285734 Query 27978 AACTTGAATACCATGCTTCACAGCGAGACCGGATCGTGGTGCAACACGACCAT 28030 | ||| |||||| ||| ||||| ||||| || |||| || |||| Sbjct 2285733 TGTGTCAATGAAATGCTTGGAAGCCAGACCTGATCGAGGGGCAATGCGTCCAT 2285681 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596568459060640