Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20pininemorale_20[genbank_20GCA_5F002165215.1_202017-06-02]
153 sequences; 47,778,485 total letters
Query= NC_020852.1
Length=186468
Score E
Sequences producing significant alignments: (Bits) Value
seq5 241 2e-58
seq7 131 2e-25
seq1 91.5 2e-13
>seq5
Length=2590615
Score = 241 bits (266), Expect = 2e-58
Identities = 1147/1783 (64%), Gaps = 55/1783 (3%)
Strand=Plus/Minus
Query 75211 CCCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGT 75270
||| ||| ||||| ||||||| || | | || ||| || || || || || ||
Sbjct 1619447 CCCTCAGCACATGATCATGCGTGTGTCTGTTGGTATCTGGGGTGATGATATCGAGCGAGT 1619388
Query 75271 CTTGGAGACATACGACAAGATGTCC--CAAGGTATGTTCATTCACGCAACACCAACCCTC 75328
||||||||||||| | |||||| |||| | | ||| || || | || || |||
Sbjct 1619387 CTTGGAGACATACAATCTGATGTCTAGCAAGTTCT--TCACGCATGCTTCCCCCACGCTC 1619330
Query 75329 TTCAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAG 75388
|||||||| || || || || || |||| ||||||| | | | | |||||
Sbjct 1619329 TTCAATGCCGGCACCCCTCAGCCCCAATTGTCATCTTGCTTCTTGGTTGATATGAAGGAC 1619270
Query 75389 GACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCT 75448
||| || | || ||||| | ||||| | | ||||| ||||| ||| ||||
Sbjct 1619269 GACAGTATTGAGGGAATCTACGATACTCTCAAGACCTGTGCCATGATCTCCAAGATGGCT 1619210
Query 75449 GGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTAT-TCGGGGG-A 75506
|| |||||||| | | | || | | | || | | ||| || ||| || |
Sbjct 1619209 GGTGGTATTGGTCTAAATGTGCACCGTATTCGTGCTACTGG--CTCATACATCGCCGGTA 1619152
Query 75507 CAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCT 75566
| || ||| ||| ||||| || |||| |||||||| || || ||| ||| || || |
Sbjct 1619151 CCAACGGTACATCGAATGGTGTTGTTCCTATGCTTCGTGTCTTCAACAACACTGCTCGGT 1619092
Query 75567 ATGTAAATCAAGCGGGGCGTC--GCAAGG-GGTCCATC-GCGGTCTACTTGGAACCATGG 75622
|||| | || | | ||| | || | ||| | | || ||||| | || || |||
Sbjct 1619091 ATGTCGACCAGG-GTGGCAACAAGCGACCCGGTGCTTTTGCCATCTACCTCGAGCCTTGG 1619033
Query 75623 CATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGG 75682
|| | ||| || | || |||||||| | || ||||| ||| | || |||| || |
Sbjct 1619032 CACTCTGATGTCTTCGATTTCCTTGATCTCCGTAAGAACCACGGTAAGGAGGAGG-TCCG 1618974
Query 75683 TGTA-GAGATCTCTTTTCATC--CCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAG 75739
|| | ||||| |||| || ||| ||||| || || |||||||||||||| |||||
Sbjct 1618973 TGCCCGTGATCT--TTTCCTCGCCCTTTGGATCCCTGATCTTTTCATGAAGCGTGTTGAA 1618916
Query 75740 GAGGGTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGTG 75799
|| ||| | ||| | || | ||||| || || || || ||| |||||
Sbjct 1618915 AAGAACGGTGACTGGACACTGATGTGTCCCAACGAGTGCCCTGGCCTCGCCGACTGCTAC 1618856
Query 75800 GGTGAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGC---CAATGCG 75856
|| |||||||| || || || ||| |||||| || ||||||| | | ||| |
Sbjct 1618855 GGAGAGGAGTTCGAGGCTCTGTACGAAAAGTACGAGAAGGAGGGCAAGGGTCGCAA---G 1618799
Query 75857 ACTGTACCAGCCGCCGATG-TTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAAC 75915
|| | | || | | || | ||||| | || |||||| | | ||||| ||||| ||||
Sbjct 1618798 ACAAT-CAAGGCTCAGAAGCTTTGGTACGCCATTCTCGAGGCCCAGACTGAGACCGGAAA 1618740
Query 75916 ACCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAAC 75975
|||| ||||| ||||||||||| |||||| ||||| ||||||||||| | || ||
Sbjct 1618739 CCCATTCATGCTCTACAAGGATGCCTGTAACCGCAAGAGCAACCAAAAGAACCTCGGTAC 1618680
Query 75976 AATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGC 76035
||| ||||| || |||||||| |||||| | |||||| | | || ||| ||
Sbjct 1618679 CATCCGAAGCTCCAACCTTTGCACTGAAATTATCGAGTACTGTGCTCCTGACGAGGTCGC 1618620
Query 76036 TGTTTGCAATTTGGCATCAATCGCCCTTCCAAAGTATGTCAATGAAGA-GA--CTCGCAC 76092
||| ||||| | || || | | || || | |||| | || || || ||
Sbjct 1618619 TGTCTGCAACCTTGCCTCTCTGTCTCTGCCCTCCTTCATCAACTACGATGAAGCTTGC-- 1618562
Query 76093 TTTTGATTATGAAAAACTT-CATGAAATCACAAAGATTGTTACCAAAAATCTAAACCGAG 76151
| || | | || || || || | ||| || |||||| || | |||
Sbjct 1618561 -TACGACT-TCAAGAAGTTGCACAAGGTCAGTCAGGTTGTTATTCGCAACTTGAACAAGA 1618504
Query 76152 TCATTGACAGAAATTTTTATCCCGTTGAGACTGCGCGAAAGTCTAATATGCGACACAGAC 76211
|||| || || || || || || || || || ||| ||||| ||| |||
Sbjct 1618503 TCATCGATGTGAACCACTACCCTGTCCAGGAGGCTCGCAACAGTAACATGCGCCACCGAC 1618444
Query 76212 CTATTGGTTTGGGTGTTCAAGGTCTCGCGGATGTATTTATTT-TGTGCCGCTACGCATTT 76270
| |||||| |||||||||| || ||||| |||| || || | ||| | | | ||
Sbjct 1618443 CCATTGGTCTGGGTGTTCAGGGCCTCGCCGATGCTTTCCTTGCTCTGCGTATGCCC-TTC 1618385
Query 76271 GATTCAGATGAAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCACGCATCC 76330
|| ||| || || ||| | || | ||||| || ||||| |||||||| ||
Sbjct 1618384 GAGTCACCCGAGGCTCGTGAGCTCAACAAGCAGATCTTCGAGACCATTTATCACGCTGCC 1618325
Query 76331 CTGGAGGCGAGTTGTGAAT-TGGCTGAAGCCCAAGGTTCCTATGAGACATTTGAGGGTTC 76389
|| || ||| | ||||| | | | ||| |||| || || |||||||
Sbjct 1618324 CTCACTGCCTCC-GTGCAGCTGGCTAAGGAGGAGGGTCCCTACTCCACCTTCAAGGGTTC 1618266
Query 76390 TCCCGCGTCCCAAGGGGTGCTTCAGTTTGATATGTGGGAAGGTGAAACCAAGCTCAACTA 76449
||||| || | || | || |||||||| |||||| || || ||||| || | ||
Sbjct 1618265 CCCCGCCTCTGAGGGTATCCTCCAGTTTGACATGTGG-AACGTCAAACCCT-CTGACCTC 1618208
Query 76450 CG--ACTGGGA---TGTTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTT 76504
| ||||||| | ||| ||||| ||||| | || | |||||||||||
Sbjct 1618207 TGGGACTGGGAGACTCTTCGAGAGGAAG---TCAAGACACACGGCATCCGTAACAGTCTG 1618151
Query 76505 TTGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTT 76564
| | || || ||||| || ||| ||| | || || ||||||| || || |||||
Sbjct 1618150 CTCCTTGCTCCTATGCCTACTGCCAGTACCTCCCAGATTCTGGGTAACAACGAGTGCTTC 1618091
Query 76565 GAACCATACACAACAAACATCTACCTGAGAAGAACCCTCGCAGGTGAGTTTGTCATTGTC 76624
|| || ||||| | || ||||||| | | ||||| |||||||| |||||
Sbjct 1618090 GAGCCCTACACCTCCAATATCTACCAACGCCGTGTTCTCGCTGGTGAGTTCCAGGTTGTC 1618031
Query 76625 AACAAGCACCTCGTCAATGACCTCAAGAAGATTGGTCTCTGGTCCAAGGATATGAAGGAT 76684
||| || |||| ||||| | || ||||| |||||| | | ||||||| |
Sbjct 1618030 AACCCCTGGCTGCTCAAGGACCTTGTCGACATGGGTCTGTGGTCCGATGCTATGAAGAAC 1617971
Query 76685 CTCATGGTGAAAGCGGGTGGTTCCATTCAAAATATCTCAGATATCCCAGATGATATCAAG 76744
| ||| | | | |||||||||||| || || | | ||||| | || |||||
Sbjct 1617970 CGCATCATTGCTGAGAATGGTTCCATTCAGAACATTCCCAACATCCCTGCCGACGTCAAG 1617911
Query 76745 AATCTCTACCGCACAGTGTGGGAAATCAAGATGAAAGATGTCATTGACATGGCCGCAGAT 76804
||| ||| || || ||||| ||| | | ||| || | ||||| || |||
Sbjct 1617910 GCTCTGTACAAGACTGTCTGGGAGATCTCTCAGCGCCAGGTCGTTCAGATGGCTGCTGAT 1617851
Query 76805 CGTGGTCGCTTCATTGATCAAAGTCAAAGT--ATGAATCTATTCATGGAAAGTCCAACGA 76862
|| ||| ||||||||||| |||| ||| |||| | |||| | || ||||
Sbjct 1617850 CGAGGTGCCTTCATTGATC--AGTCCCAGTCACTGAACATCCACATGAAGGACCCCACGA 1617793
Query 76863 TGTCCAAGCTCTCTTCTATGCA-TATGTACGCGTGGAAACAGGGGCTCAAAACCGGAATG 76921
|| |||| || | ||||| | || | || ||||||| || ||||| ||||| |||
Sbjct 1617792 TGGGCAAGATCACCAGCATGCACTTTGCAGGC-TGGAAACTTGGCCTCAAGACCGGCATG 1617734
Query 76922 TACTATCTCCGATCAAAGGCGAAAGCCCGACCAATTCAGTTCA 76964
||||| || || || |||| || || ||||||||||
Sbjct 1617733 TACTACCTTCGTACACAGGCTGCTGCTGCTCCTATTCAGTTCA 1617691
>seq7
Length=1585612
Score = 131 bits (144), Expect = 2e-25
Identities = 334/503 (66%), Gaps = 18/503 (4%)
Strand=Plus/Plus
Query 65023 AAGAAGGCGAAATGGGCAATGAAATGGTTTGAC-ACAAAGTCTCGCTCCTTCGCCGAGCG 65081
|||||||| | ||||| || |||| | | | || | ||| |||||| ||| ||||
Sbjct 1400941 AAGAAGGCTGACTGGGCCATCCGATGGATCCAGGATAAGGACTC-CTCCTTTGCCCAGCG 1400999
Query 65082 CCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCATTCTGCGCTATTTA 65141
|| |||| ||||| ||| ||||||||||||||| || | ||| | |||| |
Sbjct 1401000 TCTCGTTGCCTTTGCTGCTGTTGAGGGTATCTTCTTCAGTGGTGCCTTCGCCTCTATCTT 1401059
Query 65142 TTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAATGAACTTATTTCCCG 65201
||| | |||||||| ||||||||||| || || ||||| || || || || || ||
Sbjct 1401060 CTGGCTCAAGAAGCGTGGTCTCATGCCTGGTCTGACTTTCTCCAACGAGCTCATCTCTCG 1401119
Query 65202 AGATGAGGGTCTCCACCAGGAGTTTGCCGTGGAGCTCTTCAAGACTTTGCGTAA---TAG 65258
|| |||||||| ||| || |||| | || ||| || | || | || | |
Sbjct 1401120 TGACGAGGGTCTTCACACTGACTTTG-CATG--CCTCCTCCACTCTCACCTCAAGGGTCG 1401176
Query 65259 ACCCACTACCGAAACTATCCACGCCATCGTGAAAGAGGCGGTTGAGATTGAGAAAGGGTT 65318
||| || | | ||||| | ||| | | || || || |||||| | | |||
Sbjct 1401177 TGCCAGTAAGCAGATGATCCAGGATATCATCACTGATGCCGTCACCATTGAGCAGGAGTT 1401236
Query 65319 CATCTTGGACGCACTCCCATGTAATCTCATCGGTATGAACTCTGAGAAGATGTCCGAGTA 65378
| || || || || || ||| ||| |||| ||||||||||| ||| ||||
Sbjct 1401237 CCTCACCGAAGCTCTTCCCTGTGCCCTCCTCGGCATGAACTCTGACCTCATGAAGCAGTA 1401296
Query 65379 CATTGAGTATGTGTCGGATCGTCTCCTCAAACAAGTTGGGGTGCCACCCA-----TTTGG 65433
|||||||| || | ||||||||||| |||| || | | | |
Sbjct 1401297 CATTGAGTTCGTCGCTGATCGTCTCCTTGTCGCTCTTGG-----CAACGAGAAGGTCTAC 1401351
Query 65434 AACGCGAAGAATCCATTTGACTTTATGGAAAACATTAGCCTTGATGGGAAGACCAACTTC 65493
|| || | || || || ||||||||||| ||||| ||||| ||| ||||||||||||
Sbjct 1401352 AAGGCCACCAACCCCTTCGACTTTATGGAGAACATCTCCCTTGGTGGCAAGACCAACTTC 1401411
Query 65494 TTTGAGAAGCGAGTTGGGGACTA 65516
|| |||||||| |||| |||||
Sbjct 1401412 TTCGAGAAGCGTGTTGCCGACTA 1401434
>seq1
Length=6144005
Score = 91.5 bits (100), Expect = 2e-13
Identities = 124/173 (72%), Gaps = 0/173 (0%)
Strand=Plus/Minus
Query 27858 GCGCTCAAGGACAAGTTGTGCGATGCGATCCCCTTTCTTTACCTCAAAGTCTTTGTCTCC 27917
|||||| || |||||||| || ||||| || |||| ||| ||||||||||| ||
Sbjct 2285853 GCGCTCTAGAACAAGTTGAGCAATGCGGTCGCCTTCCTTCACCTCAAAGTCGGATTCGTT 2285794
Query 27918 GTGATTGAAGAGAACGACTTTGACTTCACCTGTATAGTCGGGATCAATAACACCCGCACC 27977
|| |||||||| | ||| ||||||| ||| || |||| ||| || ||||| || ||
Sbjct 2285793 ATGGTTGAAGAGCAGGACCTTGACTTGACCACGGTAATCGGCATCGATGACACCAGCGCC 2285734
Query 27978 AACTTGAATACCATGCTTCACAGCGAGACCGGATCGTGGTGCAACACGACCAT 28030
| ||| |||||| ||| ||||| ||||| || |||| || ||||
Sbjct 2285733 TGTGTCAATGAAATGCTTGGAAGCCAGACCTGATCGAGGGGCAATGCGTCCAT 2285681
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 596568459060640
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