Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20pininemorale_20[genbank_20GCA_5F002165215.1_202017-06-02] 153 sequences; 47,778,485 total letters Query= NC_021248.1 Length=307691 Score E Sequences producing significant alignments: (Bits) Value seq15 109 1e-18 >seq15 Length=769536 Score = 109 bits (120), Expect = 1e-18 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 |||||||| | |||||| | || || || | ||||| || || ||| || || || Sbjct 351323 ATACCACCACGAAGACGGAGAACCAAGTGGAGAGTAGATTCCTTCTGGATGTTGTAGTCG 351264 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 || | ||||| |||| || | ||| || ||||| ||||| | || ||||||||| || Sbjct 351263 GAAAGAGTTCGGCCATCCTCAAGTTGCTTGCCAGCGAAGATGAGTCGCTGTTGATCCGGA 351204 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || || || || || || || || | || |||||| || | ||| || || || Sbjct 351203 GGAATACCCTCCTTGTCCTGGATCTTGCTCTTCACATTATCAATGGTATCGGATGACTCG 351144 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 ||||| ||||||||||| || ||||| | || || | || || ||||| Sbjct 351143 ACTTCCAGAGTAATGGTCTTTCCAGTAAGGGTCTTGACGAAGATTTGCAT 351094 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 984478070111550