Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20pininemorale_20[genbank_20GCA_5F002165215.1_202017-06-02]
153 sequences; 47,778,485 total letters
Query= NC_024625.1
Length=151109
Score E
Sequences producing significant alignments: (Bits) Value
seq5 199 4e-46
seq7 145 7e-30
seq15 136 4e-27
>seq5
Length=2590615
Score = 199 bits (220), Expect = 4e-46
Identities = 1001/1569 (64%), Gaps = 47/1569 (3%)
Strand=Plus/Plus
Query 148233 TCGATCAGGTCATCGATCAGATACTGATTCACCACCTGAAACTCGCCGGCGAGCACGCGC 148292
|||| ||||| | || ||| | | || || ||||| ||||| || ||||| || ||
Sbjct 1618002 TCGACAAGGTCCTTGAGCAGCCAGGGGTTGACAACCTGGAACTCACCAGCGAGAACACGG 1618061
Query 148293 CGCAGATACACGTTGCTCGTAAACGGTTCAAACGACTCGTTGTTGCCCAAAATCTGCGCG 148352
|| | || | ||| || | || || || |||||||||| |||| |||||| | |
Sbjct 1618062 CGTTGGTAGATATTGGAGGTGTAGGGCTCGAAGCACTCGTTGTTACCCAGAATCTGGGAG 1618121
Query 148353 GTCGTTGCCGTGGGCATGTACGCTACCAGCAGCGAGTTGCGCAAACCGCGATTTTTTATT 148412
|| | || || ||||| || | ||||| ||| || | ||| | | || | |
Sbjct 1618122 GTACTGGCAGTAGGCATAGGAGCAAGGAGCAGACTGTTACGGATGCCGTGTGTCTTGACT 1618181
Query 148413 TTGCGCTTCA-GAGCCGCCCAGTCCCAGAGCGGCGACGGTGTCACGTTCCACATGTCGTA 148471
| | || | ||| | ||||||||||||| || ||| | |||||||||||||| |
Sbjct 1618182 TC-CTCTCGAAGAGTCTCCCAGTCCCAGAGGTCAGAGGGTTTGACGTTCCACATGTCAAA 1618240
Query 148472 CTGCAGAATGCCGCGGCTAGCGGGGCTGCCCTCGTACGAGCTGTACGGTCCGTGCGCCGC 148531
||| || || || |||||| |||| | | | | ||| || || | | ||
Sbjct 1618241 CTGGAGGATACCCTCAGAGGCGGGGGAACCCTTGAAGGTGGAGTAGGGACCCTCCTCCTT 1618300
Query 148532 CGCCAGTTCGCA-GCTCGCCTCGAGCGCGCCGTAGTAAATCGTCTCGGCAATTTGCCTGT 148590
||||| | ||| | || ||| || ||| ||||| |||||| || ||| |||
Sbjct 1618301 AGCCAGCT-GCACGGAGGCAGTGAGGGCAGCGTGATAAATGGTCTCGAAGATCTGCTTGT 1618359
Query 148591 TGAGC---AGCGCCGCCGACTCGCTTTCGTACGGCATACGCAGCCGCACAAACGCGTCGG 148647
||||| | ||| || | | ||| | ||||||||||| | || || ||||
Sbjct 1618360 TGAGCTCACGAGCC-TCGGGTGAC--TCGAAGGGCATACGCAGAGCAAGGAAAGCATCGG 1618416
Query 148648 CAAGGCCCTGTACGCCCACGCCAATGGGCCGGTGTTTAATGTTGGAGAGGCGCGCGCTCT 148707
| |||||||| || |||| |||||||| ||||| ||||| | ||| || ||
Sbjct 1618417 CGAGGCCCTGAACACCCAGACCAATGGGTCGGTGGCGCATGTTACTGTTGCGAGCCTCCT 1618476
Query 148708 CGAGCGGATAGTGGTTGCGGTCGATGATCTTG-TCAAGATTGCGCACCACCACCTTTGTA 148766
|| || |||||||| |||||||||||| ||||| ||||| | || |||| |
Sbjct 1618477 GGACAGGGTAGTGGTTCACATCGATGATCTTGTTCAAG-TTGCGAATAACAACCTGACTG 1618535
Query 148767 ATTCTGCGCAGCAATTCAAAATCGTA-CTTG--TCATC-TA--CGATGCATCGGTTCACG 148820
| || ||| | | || ||||| | | ||||| || |||| | | ||
Sbjct 1618536 ACCTTGTGCAACTTCTTGAAGTCGTAGCAAGCTTCATCGTAGTTGATGAAGGAGGGCAGA 1618595
Query 148821 GCGATAGAGGCTAGATTGCACACGGCCGTCTCATCCGGGGCGCTGTACTCTACGATCTCG 148880
| | |||||| || ||||| || || ||| || || || | |||||| | || ||
Sbjct 1618596 GACAGAGAGGCAAGGTTGCAGACAGCGACCTCGTCAGGAGCACAGTACTCGATAATTTCA 1618655
Query 148881 GCGCACAGATTGCTGCATTTGATCACGCCCACGTTCTTTTGATTGCTCTTGCTGTTGCAC 148940
| ||| || ||| || | ||| || | ||||||||| |||||||||| ||| ||
Sbjct 1618656 GTGCAAAGGTTGGAGCTTCGGATGGTACCGAGGTTCTTTTGGTTGCTCTTGCGGTTACAG 1618715
Query 148941 GCGTCCTTGTACAGCATGTACGGTCCGCCAGTTTCCACCTGCGTTTCCACTAT---GAAC 148997
|| |||||||| |||||| | || || || || ||| | || | || | ||
Sbjct 1618716 GCATCCTTGTAGAGCATGAATGGGTTTCCGGTCTCAGTCTGGGCCTCGAGAATGGCGTAC 1618775
Query 148998 CGATGCAGGTCCTGCGCGCGCACTTGCTGCTCGTAGCGA------CCCTCCTGCTCGTA- 149050
| | || | ||| || |||| | || | |||| ||||||| ||||||
Sbjct 1618776 CAA---AGCTTCTGAGC-----CTTGATTGTC-TTGCGACCCTTGCCCTCCTTCTCGTAC 1618826
Query 149051 -TAAAGTATACAGCCGCTCGAACGCCTCGCCGTAGCAATCGTCGAGACCGGGGCACTTGT 149109
| ||| | ||| ||||||| |||| |||||||| ||| |||| || ||||||| ||
Sbjct 1618827 TTTTCGTACAGAGC--CTCGAACTCCTCTCCGTAGCAGTCGGCGAGGCCAGGGCACTCGT 1618884
Query 149110 GCGGGCACATGAGCGACCACACGCCGTCCGCGTACACGCGCTTCATAAACAGATCGGGCA 149169
|| ||||| || | ||| | |||| | | || |||||||| || ||||| || |
Sbjct 1618885 TGGGACACATCAGTGTCCAGTCACCGTTCTTTTCAACACGCTTCATGAAAAGATCAGGGA 1618944
Query 149170 CCCAGAGCGCGTACATGAGGTCGCGCGCCTTGCAGTCTTCGGCGCCCATGTTGCGGCGCA 149229
||| || ||| | || || || || | || || || ||| || |
Sbjct 1618945 TCCAAAGGGCGAGGAAAAGATCACGGGCACGGACCTCCTCCTTACCGTGGTTCTTACGGA 1619004
Query 149230 GGTTGAGCACGCTGAATATGTCCGCGTGCCACGGCTCAATGTACACCGCGAGCGCGCCCT 149289
| | || | ||| | || | |||||| ||||| | ||| | || | || ||
Sbjct 1619005 GATCAAGGAAATCGAAGACATCAGAGTGCCAAGGCTCGAGGTAGATGGCAAAAGCACCGG 1619064
Query 149290 TGCGC---TTGCCGCCCTGGTCGACGTGGCGCACCATGTTGTTAAACACTCGAACCATAG 149346
||| ||||| ||||||||||| | || | ||||||| || || |||| |||||
Sbjct 1619065 GTCGCTTGTTGCCACCCTGGTCGACATACCGAGCAGTGTTGTTGAAGACACGAAGCATAG 1619124
Query 149347 GTTCAATGCCACTGGCAGTGCCGTTAGTAGAGCTAATGCGACTGCCGCGCGCTCGCACTT 149406
| ||| ||| | | || ||||| ||| | ||| ||| || || |
Sbjct 1619125 GAACAACACCATTCGATGTACCGTTGGTACCGGCGATGTATGAGCCAGTAGCACGAATAC 1619184
Query 149407 TGTGCACGTTGACGCCGATGCCGCC-GCCGTACTTTGAGATGGCCGCGCAGTCGCCGAGC 149465
|||||| || | || || || || ||| | ||| ||||| || ||| |||
Sbjct 1619185 GGTGCACATTTAGACCAATACCACCAGCCAT-CTTGGAGATCATGGCACAGGTCTTGAGA 1619243
Query 149466 GTCGAGTAGATGCCCTCGATGCTGTCGCGCTTCATGGTCAGCAGAAAGCACGAGCACATT 149525
|| |||||| ||||| || |||||| |||||| | || ||||| || ||| |
Sbjct 1619244 GTATCGTAGATTCCCTCAATACTGTCGTCCTTCATATCAACCAAGAAGCAAGATGACAAT 1619303
Query 149526 TGCGGAAAACGCGTGCCGGCCGCGAACATGGTGGGGCTGGCGTGTGT-AAAATATTTCTG 149584
|| || | | |||||||| ||| | |||||| || || || || | || ||
Sbjct 1619304 TGGGGCTGAGGGGTGCCGGCATTGAAGAGCGTGGGGGAAGCATGCGTGAAGAACTTGCTA 1619363
Query 149585 GCTCATCATCTCGTACGACTCGAGCACGCGGTCCATGTCATCGCCATGGATGCCTATGGC 149644
| ||||| | ||| | ||| | || || || || ||||| || ||| || | |
Sbjct 1619364 G-ACATCAGATTGTATGTCTCCAAGACTCGCTCGATATCATCACCCCAGATACCAACAGA 1619422
Query 149645 GACGCGCATCAGCATATGCTGCGGTCGCTCCGCCACTTTGTTTCCAATTTTGAGCAAGTA 149704
|| ||||| | ||| ||||| || ||||| | | || |||| ||||| | |||
Sbjct 1619423 CACACGCATGATCATGTGCTGAGGGCGCTCGACAATCTTACCGTCAATCTTGAGGAGGTA 1619482
Query 149705 GCCGTTTTCTAGTGTCTTGTAGCCAAAGTACTTGTAGTCAAAGTCGCGGCCGTGGTCAAT 149764
|| | |||||| |||||||||| | ||| | || |||||| | | | ||||
Sbjct 1619483 TGATCGCTCCAAAGTCTTGAAGCCAAAGTATTGGTATTGGAAATCGCGGTCATAGACAAT 1619542
Query 149765 GGCGGCGTC 149773
||| | |||
Sbjct 1619543 GGCAGAGTC 1619551
>seq7
Length=1585612
Score = 145 bits (160), Expect = 7e-30
Identities = 153/199 (77%), Gaps = 2/199 (1%)
Strand=Plus/Minus
Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521
||||||||| ||||| || ||||| |||| || ||| | | | ||||||||||||||||
Sbjct 344058 GGTGGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCA-TCCTCGAGCTGCTTGC 344000
Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581
| || | ||||| |||||||||||||| |||||||| |||||||| |||||| ||
Sbjct 343999 CAGCAAAGATGAGGCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACT 343940
Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641
||| | || | ||||||| | |||||| || | ||||| || || || || || |
Sbjct 343939 TGACGTTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATCGTCTTCCCCGTGAGGG 343880
Query 133642 TTTTTACGAAAATCTGCAT 133660
| || ||||||||||||||
Sbjct 343879 TCTTGACGAAAATCTGCAT 343861
>seq15
Length=769536
Score = 136 bits (150), Expect = 4e-27
Identities = 149/198 (75%), Gaps = 0/198 (0%)
Strand=Plus/Minus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCC 133523
|||||||| ||||| || |||||||| | ||| |||||| |||||||||||
Sbjct 350780 GTGGACTCCTTCTGAATGTTGTAATCAGAGAGAGTGCGGCCGTCCTCAAGCTGCTTGCCG 350721
Query 133524 GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTG 133583
||| |||| | || ||||||||||| |||||||| |||||||| ||||| ||||
Sbjct 350720 GCGAAAATCAAGCGTTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGAATCTTGGACTTG 350661
Query 133584 AGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTT 133643
| | |||| ||||||| | ||| || |||| ||||| ||| |||||||||| ||
Sbjct 350660 ACGTTGTCAATAGTGTCGGAAGACTCAACCTCGAGGGTGATGGTCTTGCCGGTCAAGGTC 350601
Query 133644 TTTACGAAAATCTGCATG 133661
|| ||||| |||||||||
Sbjct 350600 TTGACGAAGATCTGCATG 350583
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 483419875457720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |