Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20pininemorale_20[genbank_20GCA_5F002165215.1_202017-06-02] 153 sequences; 47,778,485 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq5 199 4e-46 seq7 145 7e-30 seq15 136 4e-27 >seq5 Length=2590615 Score = 199 bits (220), Expect = 4e-46 Identities = 1001/1569 (64%), Gaps = 47/1569 (3%) Strand=Plus/Plus Query 148233 TCGATCAGGTCATCGATCAGATACTGATTCACCACCTGAAACTCGCCGGCGAGCACGCGC 148292 |||| ||||| | || ||| | | || || ||||| ||||| || ||||| || || Sbjct 1618002 TCGACAAGGTCCTTGAGCAGCCAGGGGTTGACAACCTGGAACTCACCAGCGAGAACACGG 1618061 Query 148293 CGCAGATACACGTTGCTCGTAAACGGTTCAAACGACTCGTTGTTGCCCAAAATCTGCGCG 148352 || | || | ||| || | || || || |||||||||| |||| |||||| | | Sbjct 1618062 CGTTGGTAGATATTGGAGGTGTAGGGCTCGAAGCACTCGTTGTTACCCAGAATCTGGGAG 1618121 Query 148353 GTCGTTGCCGTGGGCATGTACGCTACCAGCAGCGAGTTGCGCAAACCGCGATTTTTTATT 148412 || | || || ||||| || | ||||| ||| || | ||| | | || | | Sbjct 1618122 GTACTGGCAGTAGGCATAGGAGCAAGGAGCAGACTGTTACGGATGCCGTGTGTCTTGACT 1618181 Query 148413 TTGCGCTTCA-GAGCCGCCCAGTCCCAGAGCGGCGACGGTGTCACGTTCCACATGTCGTA 148471 | | || | ||| | ||||||||||||| || ||| | |||||||||||||| | Sbjct 1618182 TC-CTCTCGAAGAGTCTCCCAGTCCCAGAGGTCAGAGGGTTTGACGTTCCACATGTCAAA 1618240 Query 148472 CTGCAGAATGCCGCGGCTAGCGGGGCTGCCCTCGTACGAGCTGTACGGTCCGTGCGCCGC 148531 ||| || || || |||||| |||| | | | | ||| || || | | || Sbjct 1618241 CTGGAGGATACCCTCAGAGGCGGGGGAACCCTTGAAGGTGGAGTAGGGACCCTCCTCCTT 1618300 Query 148532 CGCCAGTTCGCA-GCTCGCCTCGAGCGCGCCGTAGTAAATCGTCTCGGCAATTTGCCTGT 148590 ||||| | ||| | || ||| || ||| ||||| |||||| || ||| ||| Sbjct 1618301 AGCCAGCT-GCACGGAGGCAGTGAGGGCAGCGTGATAAATGGTCTCGAAGATCTGCTTGT 1618359 Query 148591 TGAGC---AGCGCCGCCGACTCGCTTTCGTACGGCATACGCAGCCGCACAAACGCGTCGG 148647 ||||| | ||| || | | ||| | ||||||||||| | || || |||| Sbjct 1618360 TGAGCTCACGAGCC-TCGGGTGAC--TCGAAGGGCATACGCAGAGCAAGGAAAGCATCGG 1618416 Query 148648 CAAGGCCCTGTACGCCCACGCCAATGGGCCGGTGTTTAATGTTGGAGAGGCGCGCGCTCT 148707 | |||||||| || |||| |||||||| ||||| ||||| | ||| || || Sbjct 1618417 CGAGGCCCTGAACACCCAGACCAATGGGTCGGTGGCGCATGTTACTGTTGCGAGCCTCCT 1618476 Query 148708 CGAGCGGATAGTGGTTGCGGTCGATGATCTTG-TCAAGATTGCGCACCACCACCTTTGTA 148766 || || |||||||| |||||||||||| ||||| ||||| | || |||| | Sbjct 1618477 GGACAGGGTAGTGGTTCACATCGATGATCTTGTTCAAG-TTGCGAATAACAACCTGACTG 1618535 Query 148767 ATTCTGCGCAGCAATTCAAAATCGTA-CTTG--TCATC-TA--CGATGCATCGGTTCACG 148820 | || ||| | | || ||||| | | ||||| || |||| | | || Sbjct 1618536 ACCTTGTGCAACTTCTTGAAGTCGTAGCAAGCTTCATCGTAGTTGATGAAGGAGGGCAGA 1618595 Query 148821 GCGATAGAGGCTAGATTGCACACGGCCGTCTCATCCGGGGCGCTGTACTCTACGATCTCG 148880 | | |||||| || ||||| || || ||| || || || | |||||| | || || Sbjct 1618596 GACAGAGAGGCAAGGTTGCAGACAGCGACCTCGTCAGGAGCACAGTACTCGATAATTTCA 1618655 Query 148881 GCGCACAGATTGCTGCATTTGATCACGCCCACGTTCTTTTGATTGCTCTTGCTGTTGCAC 148940 | ||| || ||| || | ||| || | ||||||||| |||||||||| ||| || Sbjct 1618656 GTGCAAAGGTTGGAGCTTCGGATGGTACCGAGGTTCTTTTGGTTGCTCTTGCGGTTACAG 1618715 Query 148941 GCGTCCTTGTACAGCATGTACGGTCCGCCAGTTTCCACCTGCGTTTCCACTAT---GAAC 148997 || |||||||| |||||| | || || || || ||| | || | || | || Sbjct 1618716 GCATCCTTGTAGAGCATGAATGGGTTTCCGGTCTCAGTCTGGGCCTCGAGAATGGCGTAC 1618775 Query 148998 CGATGCAGGTCCTGCGCGCGCACTTGCTGCTCGTAGCGA------CCCTCCTGCTCGTA- 149050 | | || | ||| || |||| | || | |||| ||||||| |||||| Sbjct 1618776 CAA---AGCTTCTGAGC-----CTTGATTGTC-TTGCGACCCTTGCCCTCCTTCTCGTAC 1618826 Query 149051 -TAAAGTATACAGCCGCTCGAACGCCTCGCCGTAGCAATCGTCGAGACCGGGGCACTTGT 149109 | ||| | ||| ||||||| |||| |||||||| ||| |||| || ||||||| || Sbjct 1618827 TTTTCGTACAGAGC--CTCGAACTCCTCTCCGTAGCAGTCGGCGAGGCCAGGGCACTCGT 1618884 Query 149110 GCGGGCACATGAGCGACCACACGCCGTCCGCGTACACGCGCTTCATAAACAGATCGGGCA 149169 || ||||| || | ||| | |||| | | || |||||||| || ||||| || | Sbjct 1618885 TGGGACACATCAGTGTCCAGTCACCGTTCTTTTCAACACGCTTCATGAAAAGATCAGGGA 1618944 Query 149170 CCCAGAGCGCGTACATGAGGTCGCGCGCCTTGCAGTCTTCGGCGCCCATGTTGCGGCGCA 149229 ||| || ||| | || || || || | || || || ||| || | Sbjct 1618945 TCCAAAGGGCGAGGAAAAGATCACGGGCACGGACCTCCTCCTTACCGTGGTTCTTACGGA 1619004 Query 149230 GGTTGAGCACGCTGAATATGTCCGCGTGCCACGGCTCAATGTACACCGCGAGCGCGCCCT 149289 | | || | ||| | || | |||||| ||||| | ||| | || | || || Sbjct 1619005 GATCAAGGAAATCGAAGACATCAGAGTGCCAAGGCTCGAGGTAGATGGCAAAAGCACCGG 1619064 Query 149290 TGCGC---TTGCCGCCCTGGTCGACGTGGCGCACCATGTTGTTAAACACTCGAACCATAG 149346 ||| ||||| ||||||||||| | || | ||||||| || || |||| ||||| Sbjct 1619065 GTCGCTTGTTGCCACCCTGGTCGACATACCGAGCAGTGTTGTTGAAGACACGAAGCATAG 1619124 Query 149347 GTTCAATGCCACTGGCAGTGCCGTTAGTAGAGCTAATGCGACTGCCGCGCGCTCGCACTT 149406 | ||| ||| | | || ||||| ||| | ||| ||| || || | Sbjct 1619125 GAACAACACCATTCGATGTACCGTTGGTACCGGCGATGTATGAGCCAGTAGCACGAATAC 1619184 Query 149407 TGTGCACGTTGACGCCGATGCCGCC-GCCGTACTTTGAGATGGCCGCGCAGTCGCCGAGC 149465 |||||| || | || || || || ||| | ||| ||||| || ||| ||| Sbjct 1619185 GGTGCACATTTAGACCAATACCACCAGCCAT-CTTGGAGATCATGGCACAGGTCTTGAGA 1619243 Query 149466 GTCGAGTAGATGCCCTCGATGCTGTCGCGCTTCATGGTCAGCAGAAAGCACGAGCACATT 149525 || |||||| ||||| || |||||| |||||| | || ||||| || ||| | Sbjct 1619244 GTATCGTAGATTCCCTCAATACTGTCGTCCTTCATATCAACCAAGAAGCAAGATGACAAT 1619303 Query 149526 TGCGGAAAACGCGTGCCGGCCGCGAACATGGTGGGGCTGGCGTGTGT-AAAATATTTCTG 149584 || || | | |||||||| ||| | |||||| || || || || | || || Sbjct 1619304 TGGGGCTGAGGGGTGCCGGCATTGAAGAGCGTGGGGGAAGCATGCGTGAAGAACTTGCTA 1619363 Query 149585 GCTCATCATCTCGTACGACTCGAGCACGCGGTCCATGTCATCGCCATGGATGCCTATGGC 149644 | ||||| | ||| | ||| | || || || || ||||| || ||| || | | Sbjct 1619364 G-ACATCAGATTGTATGTCTCCAAGACTCGCTCGATATCATCACCCCAGATACCAACAGA 1619422 Query 149645 GACGCGCATCAGCATATGCTGCGGTCGCTCCGCCACTTTGTTTCCAATTTTGAGCAAGTA 149704 || ||||| | ||| ||||| || ||||| | | || |||| ||||| | ||| Sbjct 1619423 CACACGCATGATCATGTGCTGAGGGCGCTCGACAATCTTACCGTCAATCTTGAGGAGGTA 1619482 Query 149705 GCCGTTTTCTAGTGTCTTGTAGCCAAAGTACTTGTAGTCAAAGTCGCGGCCGTGGTCAAT 149764 || | |||||| |||||||||| | ||| | || |||||| | | | |||| Sbjct 1619483 TGATCGCTCCAAAGTCTTGAAGCCAAAGTATTGGTATTGGAAATCGCGGTCATAGACAAT 1619542 Query 149765 GGCGGCGTC 149773 ||| | ||| Sbjct 1619543 GGCAGAGTC 1619551 >seq7 Length=1585612 Score = 145 bits (160), Expect = 7e-30 Identities = 153/199 (77%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521 ||||||||| ||||| || ||||| |||| || ||| | | | |||||||||||||||| Sbjct 344058 GGTGGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCA-TCCTCGAGCTGCTTGC 344000 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | || | ||||| |||||||||||||| |||||||| |||||||| |||||| || Sbjct 343999 CAGCAAAGATGAGGCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACT 343940 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 ||| | || | ||||||| | |||||| || | ||||| || || || || || | Sbjct 343939 TGACGTTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATCGTCTTCCCCGTGAGGG 343880 Query 133642 TTTTTACGAAAATCTGCAT 133660 | || |||||||||||||| Sbjct 343879 TCTTGACGAAAATCTGCAT 343861 >seq15 Length=769536 Score = 136 bits (150), Expect = 4e-27 Identities = 149/198 (75%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCC 133523 |||||||| ||||| || |||||||| | ||| |||||| ||||||||||| Sbjct 350780 GTGGACTCCTTCTGAATGTTGTAATCAGAGAGAGTGCGGCCGTCCTCAAGCTGCTTGCCG 350721 Query 133524 GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTG 133583 ||| |||| | || ||||||||||| |||||||| |||||||| ||||| |||| Sbjct 350720 GCGAAAATCAAGCGTTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGAATCTTGGACTTG 350661 Query 133584 AGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTT 133643 | | |||| ||||||| | ||| || |||| ||||| ||| |||||||||| || Sbjct 350660 ACGTTGTCAATAGTGTCGGAAGACTCAACCTCGAGGGTGATGGTCTTGCCGGTCAAGGTC 350601 Query 133644 TTTACGAAAATCTGCATG 133661 || ||||| ||||||||| Sbjct 350600 TTGACGAAGATCTGCATG 350583 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483419875457720