Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20pininemorale_20[genbank_20GCA_5F002165215.1_202017-06-02]
153 sequences; 47,778,485 total letters
Query= NC_026922.1
Length=157977
Score E
Sequences producing significant alignments: (Bits) Value
seq7 131 2e-25
seq15 125 7e-24
>seq7
Length=1585612
Score = 131 bits (144), Expect = 2e-25
Identities = 171/237 (72%), Gaps = 0/237 (0%)
Strand=Plus/Minus
Query 134481 GCCTTTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAG 134540
||| | || || | ||| || | || ||||| || ||||| ||||| || |||||||||
Sbjct 344093 GCCATACCACCACGGAGGCGGAGGACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAG 344034
Query 134541 TCGCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCG 134600
|||| | |||| | || |||||||| ||||| ||||| || | |||||||| |||
Sbjct 344033 TCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTGCCAGCAAAGATGAGGCGCTGCTGGTCG 343974
Query 134601 GGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGAT 134660
|| || ||||| || || || || || || ||||| ||| | |||||||| ||
Sbjct 343973 GGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGAC 343914
Query 134661 TCCACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTTG 134717
||||| || || || || || || || || | || || |||||||| ||||| |||
Sbjct 343913 TCCACCTCAAGGGTGATCGTCTTCCCCGTGAGGGTCTTGACGAAAATCTGCATCTTG 343857
>seq15
Length=769536
Score = 125 bits (138), Expect = 7e-24
Identities = 164/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
|| || | ||| || | || || || || ||||| ||||| ||||||||||| ||
Sbjct 350810 CCACCACGGAGGCGGAGAACAAGATGAAGAGTGGACTCCTTCTGAATGTTGTAATCAGAG 350751
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| ||| | ||| || ||||| ||||| || |||||||| || ||||| ||||| ||
Sbjct 350750 AGAGTGCGGCCGTCCTCAAGCTGCTTGCCGGCGAAAATCAAGCGTTGCTGGTCGGGGGGG 350691
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666
||||| || || || ||||| || ||||| ||| | |||||||| || || ||
Sbjct 350690 ATGCCCTCCTTGTCCTGAATCTTGGACTTGACGTTGTCAATAGTGTCGGAAGACTCAACC 350631
Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
||||| || ||||| || ||||| || || || ||||| || |||||
Sbjct 350630 TCGAGGGTGATGGTCTTGCCGGTCAAGGTCTTGACGAAGATCTGCAT 350584
Score = 113 bits (124), Expect = 5e-20
Identities = 155/217 (71%), Gaps = 0/217 (0%)
Strand=Plus/Minus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
|| || | ||| || | ||||| || || ||||||||||||||||||||||||||| ||
Sbjct 351092 CCACCACGGAGGCGGAGGACGAGATGGAGAGTGGATTCCTTTTGAATGTTGTAGTCGGCA 351033
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| ||| | ||| || || || || || ||||| |||| ||||| || || || ||
Sbjct 351032 AGGGTTCGGCCGTCTTCAAGTTGCTTTCCAGCAAAGATCAGGCGCTGTTGGTCAGGAGGG 350973
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666
||||| || || || ||||| || || || ||| | || |||||||| || ||
Sbjct 350972 ATGCCCTCCTTGTCCTGAATCTTCGACTTAACATTGTCGATGGTATCGGACGACTCAACC 350913
Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGA 134703
|| || || ||||| || || || | || || ||||
Sbjct 350912 TCAAGGGTGATGGTCTTGCCAGTGAGGGTCTTGACGA 350876
Score = 109 bits (120), Expect = 6e-19
Identities = 155/218 (71%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555
||||| | |||||||| || || || ||||| || ||||||||||||| | |||| ||
Sbjct 351539 AGTCGGAGAACGAGGTGAAGAGTTGACTCCTTCTGGATGTTGTAGTCGCTCAAGGTGCGA 351480
Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615
|| || | ||| || || || || || | ||| ||||||||||| || ||||| ||
Sbjct 351479 CCATCTTCCAACTGCTTACCAGCGAAGATAAGACGTTGCTGATCGGGGGGGATGCCCTCC 351420
Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675
|| || ||||| || || || ||| | ||||| ||||| || || || ||
Sbjct 351419 TTGTCCTGAATCTTGCTCTTCACGTTGTCGATAGTGTCACTGGATTCAACCTCAAGGGTG 351360
Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
||||| || || || | ||| || ||||| || |||||
Sbjct 351359 ATGGTCTTTCCAGTAAGAGTCTTCACGAAGATCTGCAT 351322
Score = 84.2 bits (92), Expect = 2e-11
Identities = 141/204 (69%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 134510 GTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTG 134569
||| || || |||||||| || |||||||||||| || || | || || || ||
Sbjct 351297 GTGGAGAGTAGATTCCTTCTGGATGTTGTAGTCGGAAAGAGTTCGGCCATCCTCAAGTTG 351238
Query 134570 TTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTT 134629
||||| || || || | ||||| ||||| || || || || || || || || || ||
Sbjct 351237 CTTGCCAGCGAAGATGAGTCGCTGTTGATCCGGAGGAATACCCTCCTTGTCCTGGATCTT 351178
Query 134630 TTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGT 134689
|| || || | || ||||| || || || || ||||||||||| || || ||
Sbjct 351177 GCTCTTCACATTATCAATGGTATCGGATGACTCGACTTCCAGAGTAATGGTCTTTCCAGT 351118
Query 134690 TAAAGTTTTAACGAAAATTTGCAT 134713
| || || ||||| ||||||||
Sbjct 351117 AAGGGTCTTGACGAAGATTTGCAT 351094
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 505397433425560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |