Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20pininemorale_20[genbank_20GCA_5F002165215.1_202017-06-02]
153 sequences; 47,778,485 total letters
Query= NC_026926.1
Length=192108
Score E
Sequences producing significant alignments: (Bits) Value
seq34 87.8 2e-12
>seq34
Length=373799
Score = 87.8 bits (96), Expect = 2e-12
Identities = 136/192 (71%), Gaps = 2/192 (1%)
Strand=Plus/Minus
Query 179479 TATATCCTTGACGCTGCTGAAGAAGCAGGTGTAGATATCAATTACTCTTGTCGTGCTGGT 179538
|| |||||||| || ||||| ||| || |||| | ||| ||||| || || ||
Sbjct 95848 TACATCCTTGATGCAGCTGAGGAAAACGGCTTAGAATTGCCTTATTCTTGCCGGGCAGGG 95789
Query 179539 GCTTGTTCATCTTGTGCTGGTAAATTAGAGAGTGGATCTGTTGATCAAAGCGATCAATCG 179598
||||| || ||||| | || ||| | | ||| | || |||||||||||||||
Sbjct 95788 GCTTGCTCTACTTGTACAGGCAAACTCGTCTCGGGAACAGTCGATCAAAGCGATCAAAGC 95729
Query 179599 TTTTTGGATGACGATCAAATGGAGTCGGGATTTATTCTGACT-TGCGTATCTTATCCTAC 179657
||||| |||||||| || || ||| | || | | | || ||| || || ||||||| ||
Sbjct 95728 TTTTTAGATGACGACCAGATAGAGGCAGGGTATGTCCT-ACTCTGTGTCGCTTATCCGAC 95670
Query 179658 TAGTGATTGCGT 179669
||| || |||||
Sbjct 95669 TAGCGACTGCGT 95658
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 614616424543840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |