Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20pininemorale_20[genbank_20GCA_5F002165215.1_202017-06-02] 153 sequences; 47,778,485 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq5 239 5e-58 seq7 158 1e-33 seq1 105 8e-18 >seq5 Length=2590615 Score = 239 bits (264), Expect = 5e-58 Identities = 1143/1786 (64%), Gaps = 47/1786 (3%) Strand=Plus/Minus Query 104221 CCCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGT 104280 ||| ||| ||||| ||||||| ||| | | ||||| || || || || || || Sbjct 1619447 CCCTCAGCACATGATCATGCGTGTGTCTGTTGGTATCTGGGGTGATGATATCGAGCGAGT 1619388 Query 104281 CTTGGAGACATACGACAAGATGTCC--CAAGGTATGTTCATTCACGCAACACCAACCCTC 104338 ||||||||||||| | |||||| |||| | | ||| || || | || || ||| Sbjct 1619387 CTTGGAGACATACAATCTGATGTCTAGCAAGTTCT--TCACGCATGCTTCCCCCACGCTC 1619330 Query 104339 TTCAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAG 104398 |||||||| || || || |||||| |||| ||||||| | | | | ||||| Sbjct 1619329 TTCAATGCCGGCACCCCTCAGCCCCAATTGTCATCTTGCTTCTTGGTTGATATGAAGGAC 1619270 Query 104399 GACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCT 104458 ||| || | || ||||| | ||||| | | ||||| ||||| ||| |||| Sbjct 1619269 GACAGTATTGAGGGAATCTACGATACTCTCAAGACCTGTGCCATGATCTCCAAGATGGCT 1619210 Query 104459 GGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTAT-TCGGGGG-A 104516 || |||||||| | | | || | | | || | | ||| || ||| || | Sbjct 1619209 GGTGGTATTGGTCTAAATGTGCACCGTATTCGTGCTACTGG--CTCATACATCGCCGGTA 1619152 Query 104517 CAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCT 104576 | || ||| ||| ||||| || |||| |||||||| || || ||| ||| || || | Sbjct 1619151 CCAACGGTACATCGAATGGTGTTGTTCCTATGCTTCGTGTCTTCAACAACACTGCTCGGT 1619092 Query 104577 ATGTAAATCAAGCTGGGCGT---CGAAAGGGATCTATCGCAGTCTATCTTGAGCCATGGC 104633 |||| | || | ||| ||| || || | || |||| || ||||| |||| Sbjct 1619091 ATGTCGACCAGGGTGGCAACAAGCGACCCGGTGCTTTTGCCATCTACCTCGAGCCTTGGC 1619032 Query 104634 ACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGGT 104693 || | ||| || | || |||||||| | ||| ||||| ||| | ||||||| || Sbjct 1619031 ACTCTGATGTCTTCGATTTCCTTGATCTCCGTAAGAACCACGGTAAGGAGGAGGTCCGTG 1618972 Query 104694 GCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGA 104753 ||| ||||| ||| ||| || ||||| || ||||| ||||||||| | ||||| ||| Sbjct 1618971 CCCGTGATCTTTTCCTCGCCCTTTGGATCCCTGATCTTTTCATGAAGCGTGTTGAAAAGA 1618912 Query 104754 GTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTGGGTG 104813 || | ||| | || | ||||| || || ||||| ||| |||| | || | Sbjct 1618911 ACGGTGACTGGACACTGATGTGTCCCAACGAGTGCCCTGGCCTCGCCGACTGCTACGGAG 1618852 Query 104814 AGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGC--GACGGT 104871 ||||||| || || || ||| |||||||||| ||| ||| | | | | || ||| | Sbjct 1618851 AGGAGTTCGAGGCTCTGTACGAAAAGTACGAG-AAGGAGGGCAAGGGTC-GCAAGACAAT 1618794 Query 104872 GCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCAT 104930 ||| | || | | ||| | || |||||| || | || || ||||| || | |||| Sbjct 1618793 CAAGGCT-CAGAAGCTTTGGTACGCCATTCTCGAGGCCCAGACTGAGACCGGAAACCCAT 1618735 Query 104931 ACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCA 104990 |||||| ||||| || |||||||||| ||||| || |||||||| | ||| ||| Sbjct 1618734 TCATGCTCTACAAGGATGCCTGTAACCGCAAGAGCAACCAAAAGAACCTCGGTACCATCC 1618675 Query 104991 AGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGT 105050 || ||||| || || || ||||| | || | | || ||| ||||| | Sbjct 1618674 GAAGCTCCAACCTTTGCACTGAAATTATCGAGTACTGTGCTCCTGACGAGGTCGCTGTCT 1618615 Query 105051 GTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACATTTGATT 105110 | ||||| || || | |||| ||| | | || || | || ||| | Sbjct 1618614 GCAACCTTGCCTCTCTGTCTCTGCCCTCCTTCAT-----CAACTACGATGAAGCTTGCTA 1618560 Query 105111 A----TGAAAAACTC-CACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGTTAT 105165 | || || | ||| | || | | ||| | ||| | |||| | || Sbjct 1618559 CGACTTCAAGAAGTTGCACAAGGTCAGTCAGGTTGTTATTCGCAACTTGAACAAGATCAT 1618500 Query 105166 TGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAAT 105225 ||| || ||||| || || ||||| || ||| ||| | ||||| || || Sbjct 1618499 CGATGTGAACCACTACCCTGTCCAGGAGGCTCGCAACAGTAACATGCGCCACCGACCCAT 1618440 Query 105226 TGGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCATT-CTTTGTCGCCACGCATTTGATT 105284 |||||| ||||||||||| ||||| |||| ||| || || || || | || || | Sbjct 1618439 TGGTCTGGGTGTTCAGGGCCTCGCCGATGCTTTCCTTGCTCTG-CGTATGCCCTTCGAGT 1618381 Query 105285 CCGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCTCTTG 105344 | ||| || || |||| || || || |||||||| |||||||| || || Sbjct 1618380 CACCCGAGGCTCGTGAGCTCAACAAGCAGATCTTCGAGACCATTTATCACGCTGCCCTCA 1618321 Query 105345 AGGCGA--GTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCC 105402 || || ||| |||| ||| || ||||| || ||||| ||||||| || Sbjct 1618320 CTGCCTCCGTGCAGC--TGGCTAAGGAGGAGGGTCCCTACTCCACCTTCAAGGGTTCCCC 1618263 Query 105403 AGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCTT--CACTAC 105460 || || | || | || || ||||| |||||| || || | ||| || | || Sbjct 1618262 CGCCTCTGAGGGTATCCTCCAGTTTGACATGTGG-AACGTCAAACCCT-CTGACCTCTGG 1618205 Query 105461 GACTGGGAAGCTCT-CAAGGAACGCA-TCAAGGAGAAGGGTCTTCGTAACAGTCTCCTCA 105518 |||||||| |||| | || | | | ||||| | || | ||||||||||| ||| Sbjct 1618204 GACTGGGAGACTCTTCGAG--AGGAAGTCAAGACACACGGCATCCGTAACAGTCTGCTCC 1618147 Query 105519 TGGCTCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAAC 105578 | ||||| ||||| || ||| ||| | || || ||||||| || || ||||| || | Sbjct 1618146 TTGCTCCTATGCCTACTGCCAGTACCTCCCAGATTCTGGGTAACAACGAGTGCTTCGAGC 1618087 Query 105579 CCTACACGACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAACA 105638 ||||||| | || ||||| | | | ||||| || ||||| | |||||||| Sbjct 1618086 CCTACACCTCCAATATCTACCAACGCCGTGTTCTCGCTGGTGAGTTCCAGGTTGTCAACC 1618027 Query 105639 AGCATCTCGTGGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGATATGAAGGATCTCA 105698 || | | ||||| || || ||||| |||||| | | ||||||| | | || Sbjct 1618026 CCTGGCTGCTCAAGGACCTTGTCGACATGGGTCTGTGGTCCGATGCTATGAAGAACCGCA 1617967 Query 105699 TGGTGAAAGCGGGTGGTTCCATTCAAAATATTGTGGATATTCCAAATGAAATTAAGAAGT 105758 | | | | |||||||||||| || ||| | || || || | ||| Sbjct 1617966 TCATTGCTGAGAATGGTTCCATTCAGAACATTCCCAACATCCCTGCCGACGTCAAGGCTC 1617907 Query 105759 TGTACCGCACAGTTTGGGAAATCAAGATGAAGGATGTCATTGACATGGCCGCAGATCGTG 105818 ||||| || || ||||| ||| | | ||| || | ||||| || ||||| | Sbjct 1617906 TGTACAAGACTGTCTGGGAGATCTCTCAGCGCCAGGTCGTTCAGATGGCTGCTGATCGAG 1617847 Query 105819 GTCGCTTCATTGATCAAAGTCAAAGT--ATGAATCTCTTCATGGAAAGTCCAACGATGTC 105876 || ||||||||||| |||| ||| |||| || |||| | || |||||| Sbjct 1617846 GTGCCTTCATTGATC--AGTCCCAGTCACTGAACATCCACATGAAGGACCCCACGATGGG 1617789 Query 105877 CAAGCTCTCTTCTATGCACATGTACA-GTTGGAAGAAGGGTCTCAAAACGGGGATGTATT 105935 |||| || | |||||| | | || | ||||| || ||||| || || ||||| | Sbjct 1617788 CAAGATCACCAGCATGCAC-TTTGCAGGCTGGAAACTTGGCCTCAAGACCGGCATGTACT 1617730 Query 105936 ACCTCCGATCTAAGGCAAAGGCGCGCCCAATTCAGTTCAGTCTTGA 105981 |||| || | |||| || || |||||||||| | |||| Sbjct 1617729 ACCTTCGTACACAGGCTGCTGCTGCTCCTATTCAGTTCACTGTTGA 1617684 >seq7 Length=1585612 Score = 158 bits (174), Expect = 1e-33 Identities = 355/522 (68%), Gaps = 11/522 (2%) Strand=Plus/Plus Query 94441 TGGACTGCTGAAGAGGTAGATCTCTCAAAGGATTTGGACGATTGGAAGACTC---TAAAT 94497 ||||||||||| ||| | |||||||| |||||| | |||| ||||| | | ||| | Sbjct 1400629 TGGACTGCTGAGGAGATTGATCTCTCCAAGGATCTCCACGACTGGAACAACCGCCTAACT 1400688 Query 94498 GAAAATGAAAAGAAATTCATAAAATACATCCTGGCATTCTTTGCTGGATCCGATGGAATT 94557 | |||| || || | ||||||| || ||||| |||| || ||||| || Sbjct 1400689 GCTGATGAGCAGTTCTTTGTCTCTCACATCCTTGCTTTCTTCGCTGCCTCTGATGGTATC 1400748 Query 94558 GTTTTTGAGAATATCAATAACAACTTTGCTGATGAGGTGCA-ATCCTCTGAAGCGAGATC 94616 || ||||| || | || || |||||| || |||| |||| || | | Sbjct 1400749 GTCAACGAGAACCTCGTCGAGCGATTCAGTGGTGAGGTCCAGATCC-CTGAGGCTCGTTG 1400807 Query 94617 CTTCTATGCGTATCAGTGTCATAATGAA-ATGGTGCATGGGGAGACATACAGTAAACTCA 94675 |||||| | | ||| |||| ||| | | | ||| ||||| ||| || | Sbjct 1400808 CTTCTACGGCTTCCAGA-TCATGATGGAGAACATTCATTCCGAGACCTACTCCCTCCTTA 1400866 Query 94676 TAGACAAGTATATTAAGGATGGTGCTGAGAAGAAGC-AGCTCTTTGAAGCCATCCAAACA 94734 | |||| || || ||||| || || ||| | | ||||| | ||||| | || Sbjct 1400867 TCGACACATACATCAAGGAGCCCGCCCAGC-GAACCTATCTCTTCAACGCCATTGAGACC 1400925 Query 94735 GTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGAT-ACAAAGTCGCG 94793 |||| || || | |||||| || || ||||| || ||| | | | || | | | Sbjct 1400926 ATTCCCTGCATCCGAAAGAAGGCTGACTGGGCCATCCGATGGATCCAGGATAAGGACTCC 1400985 Query 94794 TTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTC 94853 | ||||||| |||| ||| | || ||||| ||||||||||||||||||| |||| | Sbjct 1400986 T-CCTTTGCCCAGCGTCTCGTTGCCTTTGCTGCTGTTGAGGGTATCTTCTTCAGTGGTGC 1401044 Query 94854 CTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAA 94913 |||| | |||| | |||||||||||||| ||||||||||| ||||| |||||||| Sbjct 1401045 CTTCGCCTCTATCTTCTGGCTCAAGAAGCGTGGTCTCATGCCTGGTCTGACTTTCTCCAA 1401104 Query 94914 CGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 94955 |||||| ||||||||||||||||| || ||| || ||||| Sbjct 1401105 CGAGCTCATCTCTCGTGACGAGGGTCTTCACACTGACTTTGC 1401146 >seq1 Length=6144005 Score = 105 bits (116), Expect = 8e-18 Identities = 244/359 (68%), Gaps = 13/359 (4%) Strand=Plus/Plus Query 9697 TCCCACGGCATCAATCTCATCAATGAAGACGATG-CATGG---TTGATTTTCGCGAGCGA 9752 ||| | |||||||| || || ||||| || ||| || || ||| |||| || || | Sbjct 755780 TCCAATGGCATCAAGTTCGTCGATGAAAACAATGGCAGGGGACTTGCTTTTGGCC-GC-A 755837 Query 9753 CTTCAAAGAGATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTG 9812 | ||||| || || || |||||||| || ||||||||||| ||||| |||| | | Sbjct 755838 GTG--AAGAGGTCACGGACTCGCTTGGCACCAACACCAACAAAGATCTCGTCAAA-CTCG 755894 Query 9813 CGGCGGAACAT-TGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGA 9871 | | |||| | || ||||||||| || ||| || |||| ||||| || ||||| Sbjct 755895 CTACCAGACATGTAGAAAAAGGGGACACCAGCTTCGCCAGCAACAGCTCGAGCAAGAAGC 755954 Query 9872 GTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCCACTT 9931 |||||||| ||||| || ||| | |||||| |||| || | || || ||| Sbjct 755955 GTCTTACCAGTACCAGGAGGACCGACTAGGAGGACACCCTTGGGCAGTTTAGCACCAAGA 756014 Query 9932 CCAAAGTATCTCTCAGGTTGCTTAAGAAAATCCACAATTTCTTCCAATTCATCTTTGGCG 9991 | | | | || || | ||| ||||| || |||| ||||| | || |||||||| Sbjct 756015 TCGCTGAACTTTTCGGGATTCTTCAGAAACTCGACAACTTCTTGGAGCTCCTCTTTGGCT 756074 Query 9992 GCGTCAATCCCCTCAACATCGGTAAACCGGGTTTCAATTTCTTGTTCGGCATTGAACTC 10050 | ||| || | ||||||| | ||||| || | ||| | ||| || |||| ||| Sbjct 756075 TCATCACAGCCATGAACATCGTTGAACCGAGT---ATTTTGCTTTTCCGCCTTGACCTC 756130 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583259684513720