Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20pininemorale_20[genbank_20GCA_5F002165215.1_202017-06-02]
153 sequences; 47,778,485 total letters
Query= NC_028093.1
Length=182309
Score E
Sequences producing significant alignments: (Bits) Value
seq5 239 5e-58
seq7 158 1e-33
seq1 105 8e-18
>seq5
Length=2590615
Score = 239 bits (264), Expect = 5e-58
Identities = 1143/1786 (64%), Gaps = 47/1786 (3%)
Strand=Plus/Minus
Query 104221 CCCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGT 104280
||| ||| ||||| ||||||| ||| | | ||||| || || || || || ||
Sbjct 1619447 CCCTCAGCACATGATCATGCGTGTGTCTGTTGGTATCTGGGGTGATGATATCGAGCGAGT 1619388
Query 104281 CTTGGAGACATACGACAAGATGTCC--CAAGGTATGTTCATTCACGCAACACCAACCCTC 104338
||||||||||||| | |||||| |||| | | ||| || || | || || |||
Sbjct 1619387 CTTGGAGACATACAATCTGATGTCTAGCAAGTTCT--TCACGCATGCTTCCCCCACGCTC 1619330
Query 104339 TTCAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAG 104398
|||||||| || || || |||||| |||| ||||||| | | | | |||||
Sbjct 1619329 TTCAATGCCGGCACCCCTCAGCCCCAATTGTCATCTTGCTTCTTGGTTGATATGAAGGAC 1619270
Query 104399 GACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCT 104458
||| || | || ||||| | ||||| | | ||||| ||||| ||| ||||
Sbjct 1619269 GACAGTATTGAGGGAATCTACGATACTCTCAAGACCTGTGCCATGATCTCCAAGATGGCT 1619210
Query 104459 GGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTAT-TCGGGGG-A 104516
|| |||||||| | | | || | | | || | | ||| || ||| || |
Sbjct 1619209 GGTGGTATTGGTCTAAATGTGCACCGTATTCGTGCTACTGG--CTCATACATCGCCGGTA 1619152
Query 104517 CAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCT 104576
| || ||| ||| ||||| || |||| |||||||| || || ||| ||| || || |
Sbjct 1619151 CCAACGGTACATCGAATGGTGTTGTTCCTATGCTTCGTGTCTTCAACAACACTGCTCGGT 1619092
Query 104577 ATGTAAATCAAGCTGGGCGT---CGAAAGGGATCTATCGCAGTCTATCTTGAGCCATGGC 104633
|||| | || | ||| ||| || || | || |||| || ||||| ||||
Sbjct 1619091 ATGTCGACCAGGGTGGCAACAAGCGACCCGGTGCTTTTGCCATCTACCTCGAGCCTTGGC 1619032
Query 104634 ACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGGT 104693
|| | ||| || | || |||||||| | ||| ||||| ||| | ||||||| ||
Sbjct 1619031 ACTCTGATGTCTTCGATTTCCTTGATCTCCGTAAGAACCACGGTAAGGAGGAGGTCCGTG 1618972
Query 104694 GCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGA 104753
||| ||||| ||| ||| || ||||| || ||||| ||||||||| | ||||| |||
Sbjct 1618971 CCCGTGATCTTTTCCTCGCCCTTTGGATCCCTGATCTTTTCATGAAGCGTGTTGAAAAGA 1618912
Query 104754 GTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTGGGTG 104813
|| | ||| | || | ||||| || || ||||| ||| |||| | || |
Sbjct 1618911 ACGGTGACTGGACACTGATGTGTCCCAACGAGTGCCCTGGCCTCGCCGACTGCTACGGAG 1618852
Query 104814 AGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGC--GACGGT 104871
||||||| || || || ||| |||||||||| ||| ||| | | | | || ||| |
Sbjct 1618851 AGGAGTTCGAGGCTCTGTACGAAAAGTACGAG-AAGGAGGGCAAGGGTC-GCAAGACAAT 1618794
Query 104872 GCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCAT 104930
||| | || | | ||| | || |||||| || | || || ||||| || | ||||
Sbjct 1618793 CAAGGCT-CAGAAGCTTTGGTACGCCATTCTCGAGGCCCAGACTGAGACCGGAAACCCAT 1618735
Query 104931 ACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCA 104990
|||||| ||||| || |||||||||| ||||| || |||||||| | ||| |||
Sbjct 1618734 TCATGCTCTACAAGGATGCCTGTAACCGCAAGAGCAACCAAAAGAACCTCGGTACCATCC 1618675
Query 104991 AGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGT 105050
|| ||||| || || || ||||| | || | | || ||| ||||| |
Sbjct 1618674 GAAGCTCCAACCTTTGCACTGAAATTATCGAGTACTGTGCTCCTGACGAGGTCGCTGTCT 1618615
Query 105051 GTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACATTTGATT 105110
| ||||| || || | |||| ||| | | || || | || ||| |
Sbjct 1618614 GCAACCTTGCCTCTCTGTCTCTGCCCTCCTTCAT-----CAACTACGATGAAGCTTGCTA 1618560
Query 105111 A----TGAAAAACTC-CACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGTTAT 105165
| || || | ||| | || | | ||| | ||| | |||| | ||
Sbjct 1618559 CGACTTCAAGAAGTTGCACAAGGTCAGTCAGGTTGTTATTCGCAACTTGAACAAGATCAT 1618500
Query 105166 TGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAAT 105225
||| || ||||| || || ||||| || ||| ||| | ||||| || ||
Sbjct 1618499 CGATGTGAACCACTACCCTGTCCAGGAGGCTCGCAACAGTAACATGCGCCACCGACCCAT 1618440
Query 105226 TGGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCATT-CTTTGTCGCCACGCATTTGATT 105284
|||||| ||||||||||| ||||| |||| ||| || || || || | || || |
Sbjct 1618439 TGGTCTGGGTGTTCAGGGCCTCGCCGATGCTTTCCTTGCTCTG-CGTATGCCCTTCGAGT 1618381
Query 105285 CCGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCTCTTG 105344
| ||| || || |||| || || || |||||||| |||||||| || ||
Sbjct 1618380 CACCCGAGGCTCGTGAGCTCAACAAGCAGATCTTCGAGACCATTTATCACGCTGCCCTCA 1618321
Query 105345 AGGCGA--GTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCC 105402
|| || ||| |||| ||| || ||||| || ||||| ||||||| ||
Sbjct 1618320 CTGCCTCCGTGCAGC--TGGCTAAGGAGGAGGGTCCCTACTCCACCTTCAAGGGTTCCCC 1618263
Query 105403 AGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCTT--CACTAC 105460
|| || | || | || || ||||| |||||| || || | ||| || | ||
Sbjct 1618262 CGCCTCTGAGGGTATCCTCCAGTTTGACATGTGG-AACGTCAAACCCT-CTGACCTCTGG 1618205
Query 105461 GACTGGGAAGCTCT-CAAGGAACGCA-TCAAGGAGAAGGGTCTTCGTAACAGTCTCCTCA 105518
|||||||| |||| | || | | | ||||| | || | ||||||||||| |||
Sbjct 1618204 GACTGGGAGACTCTTCGAG--AGGAAGTCAAGACACACGGCATCCGTAACAGTCTGCTCC 1618147
Query 105519 TGGCTCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAAC 105578
| ||||| ||||| || ||| ||| | || || ||||||| || || ||||| || |
Sbjct 1618146 TTGCTCCTATGCCTACTGCCAGTACCTCCCAGATTCTGGGTAACAACGAGTGCTTCGAGC 1618087
Query 105579 CCTACACGACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAACA 105638
||||||| | || ||||| | | | ||||| || ||||| | ||||||||
Sbjct 1618086 CCTACACCTCCAATATCTACCAACGCCGTGTTCTCGCTGGTGAGTTCCAGGTTGTCAACC 1618027
Query 105639 AGCATCTCGTGGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGATATGAAGGATCTCA 105698
|| | | ||||| || || ||||| |||||| | | ||||||| | | ||
Sbjct 1618026 CCTGGCTGCTCAAGGACCTTGTCGACATGGGTCTGTGGTCCGATGCTATGAAGAACCGCA 1617967
Query 105699 TGGTGAAAGCGGGTGGTTCCATTCAAAATATTGTGGATATTCCAAATGAAATTAAGAAGT 105758
| | | | |||||||||||| || ||| | || || || | |||
Sbjct 1617966 TCATTGCTGAGAATGGTTCCATTCAGAACATTCCCAACATCCCTGCCGACGTCAAGGCTC 1617907
Query 105759 TGTACCGCACAGTTTGGGAAATCAAGATGAAGGATGTCATTGACATGGCCGCAGATCGTG 105818
||||| || || ||||| ||| | | ||| || | ||||| || ||||| |
Sbjct 1617906 TGTACAAGACTGTCTGGGAGATCTCTCAGCGCCAGGTCGTTCAGATGGCTGCTGATCGAG 1617847
Query 105819 GTCGCTTCATTGATCAAAGTCAAAGT--ATGAATCTCTTCATGGAAAGTCCAACGATGTC 105876
|| ||||||||||| |||| ||| |||| || |||| | || ||||||
Sbjct 1617846 GTGCCTTCATTGATC--AGTCCCAGTCACTGAACATCCACATGAAGGACCCCACGATGGG 1617789
Query 105877 CAAGCTCTCTTCTATGCACATGTACA-GTTGGAAGAAGGGTCTCAAAACGGGGATGTATT 105935
|||| || | |||||| | | || | ||||| || ||||| || || ||||| |
Sbjct 1617788 CAAGATCACCAGCATGCAC-TTTGCAGGCTGGAAACTTGGCCTCAAGACCGGCATGTACT 1617730
Query 105936 ACCTCCGATCTAAGGCAAAGGCGCGCCCAATTCAGTTCAGTCTTGA 105981
|||| || | |||| || || |||||||||| | ||||
Sbjct 1617729 ACCTTCGTACACAGGCTGCTGCTGCTCCTATTCAGTTCACTGTTGA 1617684
>seq7
Length=1585612
Score = 158 bits (174), Expect = 1e-33
Identities = 355/522 (68%), Gaps = 11/522 (2%)
Strand=Plus/Plus
Query 94441 TGGACTGCTGAAGAGGTAGATCTCTCAAAGGATTTGGACGATTGGAAGACTC---TAAAT 94497
||||||||||| ||| | |||||||| |||||| | |||| ||||| | | ||| |
Sbjct 1400629 TGGACTGCTGAGGAGATTGATCTCTCCAAGGATCTCCACGACTGGAACAACCGCCTAACT 1400688
Query 94498 GAAAATGAAAAGAAATTCATAAAATACATCCTGGCATTCTTTGCTGGATCCGATGGAATT 94557
| |||| || || | ||||||| || ||||| |||| || ||||| ||
Sbjct 1400689 GCTGATGAGCAGTTCTTTGTCTCTCACATCCTTGCTTTCTTCGCTGCCTCTGATGGTATC 1400748
Query 94558 GTTTTTGAGAATATCAATAACAACTTTGCTGATGAGGTGCA-ATCCTCTGAAGCGAGATC 94616
|| ||||| || | || || |||||| || |||| |||| || | |
Sbjct 1400749 GTCAACGAGAACCTCGTCGAGCGATTCAGTGGTGAGGTCCAGATCC-CTGAGGCTCGTTG 1400807
Query 94617 CTTCTATGCGTATCAGTGTCATAATGAA-ATGGTGCATGGGGAGACATACAGTAAACTCA 94675
|||||| | | ||| |||| ||| | | | ||| ||||| ||| || |
Sbjct 1400808 CTTCTACGGCTTCCAGA-TCATGATGGAGAACATTCATTCCGAGACCTACTCCCTCCTTA 1400866
Query 94676 TAGACAAGTATATTAAGGATGGTGCTGAGAAGAAGC-AGCTCTTTGAAGCCATCCAAACA 94734
| |||| || || ||||| || || ||| | | ||||| | ||||| | ||
Sbjct 1400867 TCGACACATACATCAAGGAGCCCGCCCAGC-GAACCTATCTCTTCAACGCCATTGAGACC 1400925
Query 94735 GTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGAT-ACAAAGTCGCG 94793
|||| || || | |||||| || || ||||| || ||| | | | || | | |
Sbjct 1400926 ATTCCCTGCATCCGAAAGAAGGCTGACTGGGCCATCCGATGGATCCAGGATAAGGACTCC 1400985
Query 94794 TTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTC 94853
| ||||||| |||| ||| | || ||||| ||||||||||||||||||| |||| |
Sbjct 1400986 T-CCTTTGCCCAGCGTCTCGTTGCCTTTGCTGCTGTTGAGGGTATCTTCTTCAGTGGTGC 1401044
Query 94854 CTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAA 94913
|||| | |||| | |||||||||||||| ||||||||||| ||||| ||||||||
Sbjct 1401045 CTTCGCCTCTATCTTCTGGCTCAAGAAGCGTGGTCTCATGCCTGGTCTGACTTTCTCCAA 1401104
Query 94914 CGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 94955
|||||| ||||||||||||||||| || ||| || |||||
Sbjct 1401105 CGAGCTCATCTCTCGTGACGAGGGTCTTCACACTGACTTTGC 1401146
>seq1
Length=6144005
Score = 105 bits (116), Expect = 8e-18
Identities = 244/359 (68%), Gaps = 13/359 (4%)
Strand=Plus/Plus
Query 9697 TCCCACGGCATCAATCTCATCAATGAAGACGATG-CATGG---TTGATTTTCGCGAGCGA 9752
||| | |||||||| || || ||||| || ||| || || ||| |||| || || |
Sbjct 755780 TCCAATGGCATCAAGTTCGTCGATGAAAACAATGGCAGGGGACTTGCTTTTGGCC-GC-A 755837
Query 9753 CTTCAAAGAGATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTG 9812
| ||||| || || || |||||||| || ||||||||||| ||||| |||| | |
Sbjct 755838 GTG--AAGAGGTCACGGACTCGCTTGGCACCAACACCAACAAAGATCTCGTCAAA-CTCG 755894
Query 9813 CGGCGGAACAT-TGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGA 9871
| | |||| | || ||||||||| || ||| || |||| ||||| || |||||
Sbjct 755895 CTACCAGACATGTAGAAAAAGGGGACACCAGCTTCGCCAGCAACAGCTCGAGCAAGAAGC 755954
Query 9872 GTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCCACTT 9931
|||||||| ||||| || ||| | |||||| |||| || | || || |||
Sbjct 755955 GTCTTACCAGTACCAGGAGGACCGACTAGGAGGACACCCTTGGGCAGTTTAGCACCAAGA 756014
Query 9932 CCAAAGTATCTCTCAGGTTGCTTAAGAAAATCCACAATTTCTTCCAATTCATCTTTGGCG 9991
| | | | || || | ||| ||||| || |||| ||||| | || ||||||||
Sbjct 756015 TCGCTGAACTTTTCGGGATTCTTCAGAAACTCGACAACTTCTTGGAGCTCCTCTTTGGCT 756074
Query 9992 GCGTCAATCCCCTCAACATCGGTAAACCGGGTTTCAATTTCTTGTTCGGCATTGAACTC 10050
| ||| || | ||||||| | ||||| || | ||| | ||| || |||| |||
Sbjct 756075 TCATCACAGCCATGAACATCGTTGAACCGAGT---ATTTTGCTTTTCCGCCTTGACCTC 756130
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583259684513720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |