Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20pininemorale_20[genbank_20GCA_5F002165215.1_202017-06-02] 153 sequences; 47,778,485 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq15 102 5e-17 >seq15 Length=769536 Score = 102 bits (112), Expect = 5e-17 Identities = 89/111 (80%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 34503 ATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTG 34562 |||||||||| |||||||||||||| || || | ||| ||||| ||||||||||||| Sbjct 351069 ATGGAGAGTGGATTCCTTTTGAATGTTGTAGTCGGCAAGGGTTCGGCCGTCTTCAAGTTG 351010 Query 34563 TTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTC 34613 || || ||||| || | ||||||||||| || || | ||||||||||| Sbjct 351009 CTTTCCAGCAAAGATCAGGCGCTGTTGGTCAGGAGGGATGCCCTCCTTGTC 350959 Score = 95.1 bits (104), Expect = 8e-15 Identities = 148/209 (71%), Gaps = 2/209 (1%) Strand=Plus/Minus Query 34503 ATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTG 34562 ||| |||||| |||||| |||||||| ||||| || || || || |||| ||||| || Sbjct 350787 ATGAAGAGTGGACTCCTTCTGAATGTTGTAATCAGAGAGAGTGCGGCCGTCCTCAAGCTG 350728 Query 34563 TTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTT 34622 || ||||| || || || || || ||||| || || | ||||||||||| ||| | Sbjct 350727 CTTGCCGGCGAAAATCAAGCGTTGCTGGTCGGGGGGGATGCCCTCCTTGTC-CTGAATCT 350669 Query 34623 TTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGG 34681 | | || ||| | ||| ||||| ||| || || | ||| || || || |||| Sbjct 350668 TGGACTTGACGTTGTCAATAGTGTCGGAAGACTCAACCTCGAGGGTGATGGTCTTGCCGG 350609 Query 34682 TTAACGTTTTCACAAAAATCTGCATGTTG 34710 | || || || || || ||||||||| || Sbjct 350608 TCAAGGTCTTGACGAAGATCTGCATGATG 350580 Score = 91.5 bits (100), Expect = 9e-14 Identities = 106/143 (74%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || || | |||||| | ||||| |||||||| ||||| || ||||| || || ||| Sbjct 351320 CCACCACGAAGACGGAGAACCAAGTGGAGAGTAGATTCCTTCTGGATGTTGTAGTCGGAA 351261 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 || ||||| | || |||||||| || || || || || | |||||||| ||||| || Sbjct 351260 AGAGTTCGGCCATCCTCAAGTTGCTTGCCAGCGAAGATGAGTCGCTGTTGATCCGGAGGA 351201 Query 34600 ACTCCCTCCTTGTCTGTGATCTT 34622 | ||||||||||| |||||| Sbjct 351200 ATACCCTCCTTGTCCTGGATCTT 351178 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314729013127649