Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20pininemorale_20[genbank_20GCA_5F002165215.1_202017-06-02] 153 sequences; 47,778,485 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq15 100 2e-16 seq7 95.1 8e-15 >seq15 Length=769536 Score = 100 bits (110), Expect = 2e-16 Identities = 148/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| ||||| || ||| | || || || || ||||| ||||| ||||| || | Sbjct 350584 ATGCAGATCTTCGTCAAGACCTTGACCGGCAAGACCATCACCCTCGAGGTTGAGTCTTCC 350643 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 |||||| |||| | | || || ||| ||||| || || | || || || || Sbjct 350644 GACACTATTGACAACGTCAAGTCCAAGATTCAGGACAAGGAGGGCATCCCCCCCGACCAG 350703 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 || || || || || |||||||| || || || |||| |||||| | ||||||||| Sbjct 350704 CAACGCTTGATTTTCGCCGGCAAGCAGCTTGAGGACGGCCGCACTCTCTCTGATTACAAC 350763 Query 23791 ATACAAAAAGAGTCCACATTACATTTAGTT 23820 || || || |||||||| | ||| | ||| Sbjct 350764 ATTCAGAAGGAGTCCACTCTTCATCTTGTT 350793 Score = 86.0 bits (94), Expect = 4e-12 Identities = 147/211 (70%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| || ||||| || ||||| || ||||| || || ||||| ||||| || || | Sbjct 351094 ATGCAAATCTTCGTCAAGACCCTTACTGGAAAGACCATTACTCTGGAAGTCGAGTCATCC 351153 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 || || |||| ||| | || | || | | ||||| || ||| | || || ||||| Sbjct 351154 GATACCATTGATAATGTGAAGAGCAAGA-TCCAGGACAAGGAGGGTATTCCTCCGGATCA 351212 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 |||||| | || || || ||||| ||||| || || | || ||| | ||| ||||| Sbjct 351213 ACAGCGACTCATCTTCGCTGGCAAGCAACTTGAGGATGGCCGAACTCTTTCCGACTACAA 351272 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTT 23820 ||| || || || || || | || || ||| Sbjct 351273 CATCCAGAAGGAATCTACTCTCCACTTGGTT 351303 >seq7 Length=1585612 Score = 95.1 bits (104), Expect = 8e-15 Identities = 141/200 (71%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667 || |||||||||||||| || ||||||||||| || |||||||| || || || || || Sbjct 343858 AAGATGCAGATTTTCGTCAAGACCCTCACGGGGAAGACGATCACCCTTGAGGTGGAGTCT 343917 Query 23668 ACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGAT 23727 | ||||| | || | | || || || ||||| || || | || || || Sbjct 343918 TCCGACACCATCGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCCGAC 343977 Query 23728 CAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTAC 23787 || ||||| | || ||||| ||||| || || || || | ||||| | |||| ||| Sbjct 343978 CAGCAGCGCCTCATCTTTGCTGGCAAGCAGCTCGAGGATGGCCGCACCCTGAGCGACTAC 344037 Query 23788 AACATACAAAAAGAGTCCAC 23807 ||||| || || |||||||| Sbjct 344038 AACATCCAGAAGGAGTCCAC 344057 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 338008969717724