Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20pininemorale_20[genbank_20GCA_5F002165215.1_202017-06-02] 153 sequences; 47,778,485 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq5 174 2e-38 >seq5 Length=2590615 Score = 174 bits (192), Expect = 2e-38 Identities = 434/652 (67%), Gaps = 8/652 (1%) Strand=Plus/Plus Query 77955 CCAGGGCATTCATTTGGGCACATCAATGACCAGTCACCATCTTCCTTAACTCGTTTCATA 78014 |||||||| || || || ||||||| || ||||||||| | | | ||| || ||||| Sbjct 1618872 CCAGGGCACTCGTTGGGACACATCAGTGTCCAGTCACCGTTCTTTTCAACACGCTTCATG 1618931 Query 78015 AAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTCATTTCCT 78074 || |||||||| ||||| || || | || ||||| |||| | || || || || Sbjct 1618932 AAAAGATCAGGGATCCAAAGGGCGAGGAAAAGATCACGGGCACGGACCTCCTCCTTACCG 1618991 Query 78075 GTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATT 78134 ||||| ||||| || || || | | |||||| ||||| || || || || || Sbjct 1618992 TGGTTCTTACGGAGATCAAGGAAATCGAAGACATCAGAGTGCCAAGGCTCGAGGTAGATG 1619051 Query 78135 GCCATAACTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTGGCGGTGTTATTATAA 78194 || | | | || ||||| || || || ||||| || | ||| | || ||||| || | Sbjct 1619052 GCAAAAGCACCGGGTCGCTTGTTGCCACCCTGGTCGACATACCGAGCAGTGTTGTTGAAG 1619111 Query 78195 ACTCTCAACATTGGAATAATACCGTTAGATGTTCCATTTGTTCCAGAAATATAACTTCCA 78254 || | | ||| |||| || ||| || ||||| || || || || | || || ||| Sbjct 1619112 ACACGAAGCATAGGAACAACACCATTCGATGTACCGTTGGTACCGGCGATGTATGAGCCA 1619171 Query 78255 CTTGCGCGAATAT--TACTAATGGATATCCCTATTCCTCCTGCCATCTTAGATATTAGAG 78312 | || |||||| | | || | | || || || || |||||||| || || | | Sbjct 1619172 GTAGCACGAATACGGTGCACATTTAGA--CCAATACCACCAGCCATCTTGGAGATCATGG 1619229 Query 78313 CGCAACGTTTCAATGTATCGTAGATACCCTCTATACTGTCATCCATCATGTTAA-GAAGA 78371 | || || | ||||||||||| ||||| |||||||| ||| |||| | || |||| Sbjct 1619230 CACAGGTCTTGAGAGTATCGTAGATTCCCTCAATACTGTCGTCCTTCATATCAACCAAGA 1619289 Query 78372 AAACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAATAATGTCGGAGATGCATGC 78431 | || | |||| ||| | ||| || || ||||| || | || || || |||||| Sbjct 1619290 AGCAAGAT-GACAATTGGGGCTGAGGGGTGCCGGCATTGAAGAGCGTGGGGGAAGCATGC 1619348 Query 78432 GTAAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAGCTGATTCTATGTC-CCATTG 78490 || || | || ||| | ||||||||||| || | || || || || || Sbjct 1619349 GTGAAGAACTTGCTAGACATCAGATTGTATGTCTCCAAGACTCGCTCGATATCATCACCC 1619408 Query 78491 ATGAATTCCTACCGCTACACGCATCAACATATGCTGAGGTCTTTCAACCGTCTTATTATT 78550 | || || || | |||||||| | ||| |||||||| | || || ||||| | Sbjct 1619409 CAG-ATACCAACAGACACACGCATGATCATGTGCTGAGGGCGCTCGACAATCTTACCGTC 1619467 Query 78551 TATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTAT 78602 || || | | ||||||| |||||||| || || ||||| || | |||| Sbjct 1619468 AATCTTGAGGAGGTATGATCGCTCCAAAGTCTTGAAGCCAAAGTATTGGTAT 1619519 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694667471445920