Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20pininemorale_20[genbank_20GCA_5F002165215.1_202017-06-02] 153 sequences; 47,778,485 total letters Query= NC_031242.1 Length=174307 Score E Sequences producing significant alignments: (Bits) Value seq34 82.4 9e-11 >seq34 Length=373799 Score = 82.4 bits (90), Expect = 9e-11 Identities = 153/222 (69%), Gaps = 2/222 (1%) Strand=Plus/Minus Query 161555 TACATTCTTGACGCAGCTGAGGAAGCGGGTGTGGACATCAACTACTCGTGTCGTGCAGGC 161614 ||||| ||||| |||||||||||| || | || | || || || || ||||| Sbjct 95848 TACATCCTTGATGCAGCTGAGGAAAACGGCTTAGAATTGCCTTATTCTTGCCGGGCAGGG 95789 Query 161615 GCTTGTTCGTCGTGCGCGGGAAAACTCGTCTCTGGCACCGTAGACCAAAGCGACCAGTCC 161674 ||||| || | || | || ||||||||||| || || || || |||||||| || | Sbjct 95788 GCTTGCTCTACTTGTACAGGCAAACTCGTCTCGGGAACAGTCGATCAAAGCGATCAAAGC 95729 Query 161675 TTCCTGGACGATGACCAAATCGATTCTGGTTTCATTCTGACT-TGTGTTTCTTATCCCAC 161733 || | || || ||||| || || | || | | || ||| ||||| ||||||| || Sbjct 95728 TTTTTAGATGACGACCAGATAGAGGCAGGGTATGTCCT-ACTCTGTGTCGCTTATCCGAC 95670 Query 161734 GAGCGATTGTGTGATTGAGACTGAGAAAGAAGAGGAACTGTA 161775 ||||| || || || | | | | | |||||||| ||||| Sbjct 95669 TAGCGACTGCGTTATAAAAAGTCATGAGGAAGAGGATCTGTA 95628 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 557653333485960