Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20poae_20[genbank_20GCA_5F001675295.1_202016-06-22] 181 sequences; 46,476,831 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq3 95.1 1e-14 >seq3 Length=8783590 Score = 95.1 bits (104), Expect = 1e-14 Identities = 361/563 (64%), Gaps = 9/563 (2%) Strand=Plus/Plus Query 16199 AGACACGCGAAGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTT 16258 || || || ||||| || || || ||||| | ||| || |||||||| || || Sbjct 2692406 AGGCAGGCAAAGTCAGTGTGAAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTC 2692465 Query 16259 AACCCTGGCATTTTTCCTCGTTTCTTTAACCAGAATATCGCAGCAAATGACCCCGAAAAG 16318 | || ||||| || || ||||| | |||||| || | ||||| | || ||| Sbjct 2692466 AGACCAGGCATGAGGCCACGCTTCTTGAGCCAGAAAATAGAGGCAAAGGCACCGCTGAAG 2692525 Query 16319 AATATACCCTCAACAGATGCAAAAGCGATTAATCGTTCCGCGTACGTAGCATCTTTATTA 16378 || ||||||||||| | ||||| || | | |||| || | | | || || | Sbjct 2692526 AAGATACCCTCAACGGCAGCAAAGGCAACAAGACGTTGAGCAAATGAGGAGTCCTTGTCC 2692585 Query 16379 CGAATCCATTTCTGTACCCATTCGGCTTTTTGTTTTATACAATCCATCGTTTCTATGGCC 16438 | |||||| |||| || || || | | || ||| || || || ||||| Sbjct 2692586 TGGATCCATCGAATGGCCCAGTCAGCCTTCTTTCGGATGCAAGGAATAGTGTCAATGGCG 2692645 Query 16439 TTAAACA---ATTTCTCTTTTTCCTGAATATCGATTATATACGTATCAATCAGTAAACTG 16495 || || | || | ||||| | | | | | || || || ||||| |||| | Sbjct 2692646 TTGAAGAGGTATGT-TCTTTGGGCAGGCT--CCTTGATGTAGGTGTCAATGAGTAGGGAG 2692702 Query 16496 TACATTTCTGAGTGTATGTTCTCTATGGCTATCTGAAATCCATAGAAGCATCGAGCCTCC 16555 || | || ||||| |||||||| || ||||| || || ||||||||||||||||| Sbjct 2692703 TATGTCTCGGAGTGGATGTTCTCCATCATGATCTGGAAACCGTAGAAGCATCGAGCCTCG 2692762 Query 16556 GCTATTTGTACTTCCACGTAAAATCGTTCCGCCAGGTTCTCATTCACGATACCGTCACTT 16615 | || || || || | ||||| || | |||||||| || |||||||| ||| Sbjct 2692763 GGAATCTGGACCTCGCCACTGAATCGCTCAACAAGGTTCTCGTTGACGATACCATCAGAG 2692822 Query 16616 GCAGCAAAAAACGCCAATATGTGCTTAATGAAATATTTTTCGTCAGATGTAAGA---ATA 16672 ||||| || || || | ||||| | ||| | | || || | || ||| | Sbjct 2692823 GCAGCGAAGAAAGCGAGGATGTGGGAGACGAAGAACTGCTCATCTGCAGTCAGACGGTTG 2692882 Query 16673 TGCCAATCTTTTAAATCTTTGGATATATCCACTTCTTCTGGCGTCCAAAAGCTAGCCACT 16732 | ||| || | | ||| ||||| | ||| | || || | ||||| ||| |||| || Sbjct 2692883 TTCCAGTCGTGGAGATCCTTGGAAAGATCGATCTCCTCGGCTGTCCAGAAGGAAGCCTCT 2692942 Query 16733 GCCTTTTTATACATTTTCCAAAT 16755 ||||| || ||||| | ||| || Sbjct 2692943 GCCTTCTTGTACATCTGCCAGAT 2692965 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511413242924920