Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20poae_20[genbank_20GCA_5F001675295.1_202016-06-22] 181 sequences; 46,476,831 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq1 96.9 4e-15 >seq1 Length=11790407 Score = 96.9 bits (106), Expect = 4e-15 Identities = 186/271 (69%), Gaps = 4/271 (1%) Strand=Plus/Plus Query 145996 AGCTGGTCCACGCCCTGCCCCCGGTAATCTGTCTTGGAGTCCACGTACGCGGCCCCGAAG 146055 |||||||| || ||||| || |||||| ||||||| || |||||| |||| || ||| Sbjct 2504392 AGCTGGTCTACACCCTGGCCAGTGTAATCCGTCTTGGCATCAACGTACTCGGCGCCAAAG 2504451 Query 146056 TGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCTCCCTGTGCCCCAGCCCG 146115 || | ||| ||||| ||||| ||||| |||||||| || ||| | ||| || || Sbjct 2504452 TGTCGCCATTGGAAGCCGTACACGGGACCCAGGTCGCCAACCTCACGGTGTTGAAGACCA 2504511 Query 146116 GCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTTGACGCC--CCTCGCGG 146173 |||| || || || || || ||| | ||||||||||| | ||| |||| | | Sbjct 2504512 AGGTTATCGAGAAACTCGCGCGAGCCATTGCCATCCCAGATCTTAATGCCGGCCTCACTG 2504571 Query 146174 AGAGCTCATTGGAGTCCGTGGACCCCCTGATGAACCAGAGCAGCTCTTCGAGGACCCCCC 146233 ||| || || || || ||| ||| |||||||| ||||| | | ||| | | Sbjct 2504572 AGA-CT-TTTAGAAGAGGTATTGCCCTCGATAAACCAGAGGAGCTCGGCAATGACGGCGC 2504629 Query 146234 TCCAGAAGACCCTCTTGGTGGTCAGCAGGGG 146264 ||||| | ||| ||||| || ||||| Sbjct 2504630 GGGTAAAGACACGCTTCGTGGTAAGGAGGGG 2504660 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590075464951240