Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20poae_20[genbank_20GCA_5F001675295.1_202016-06-22] 181 sequences; 46,476,831 total letters Query= NC_001875.2 Length=131995 Score E Sequences producing significant alignments: (Bits) Value seq2 122 7e-23 seq1 91.5 1e-13 >seq2 Length=9166667 Score = 122 bits (134), Expect = 7e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || || | ||| || | ||| | || ||||||||||| || || ||||| | Sbjct 2678442 CCACCACGAAGGCGGAGGACGAGATGGAGGGTTGACTCCTTTTGGATATTGTAGTCGGAG 2678501 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 ||||| | ||||||| ||||| ||||| || |||| | || ||||||||| || Sbjct 2678502 AGGGTACGACCGTCCTCAAGCTGCTTGCCGGCGAAAATCAATCGCTGCTGGTCAGGAGGA 2678561 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | |||||||||||| ||||| || || | | ||| ||||||| || |||| Sbjct 2678562 ATGCCTTCCTTGTCCTGAATCTTGGACTTGACATTGTCGATAGTATCAGAGGACTCCACC 2678621 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || | ||| |||||||||||||| | || ||||| || |||||||| Sbjct 2678622 TCAAGGGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATTTGCAT 2678668 Score = 95.1 bits (104), Expect = 1e-14 Identities = 132/185 (71%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 20979 GTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCC 21038 || |||||||| |||||||| ||||| | |||||| || | ||||| ||||| ||||| Sbjct 2677962 GTTGACTCCTTCTGAATGTTGTAGTCGGAAAGGGTTCGGCCATCCTCAAGCTGCTTGCCA 2678021 Query 21039 GCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTC 21098 ||| | || |||| ||||||||| || | |||||||| || |||||| || Sbjct 2678022 GCAAAGATGAGTCGCTGCTGGTCAGGAGGAATACCTTCCTTATCCTGGATCTTGGACTTG 2678081 Query 21099 ACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTT 21158 || | | ||| || ||| | |||| || | ||| ||||||||||| || | || Sbjct 2678082 ACGTTGTCGATGGTGTCAGAAGACTCCACCTCGAGGGTGATGGTCTTGCCAGTAAGGGTC 2678141 Query 21159 TTGAC 21163 ||||| Sbjct 2678142 TTGAC 2678146 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 20979 GTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCC 21038 || |||||||| || || || ||||| | |||||| || | ||||| ||||| ||||| Sbjct 2678244 GTCGACTCCTTCTGGATATTGTAGTCGGAAAGGGTTCGGCCATCCTCAAGCTGCTTGCCA 2678303 Query 21039 GCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTC 21098 || |||| | || ||||||||| || | |||||||| || |||||| || Sbjct 2678304 GCGAAAATCAATCGCTGCTGGTCAGGAGGAATACCTTCCTTATCCTGGATCTTGGACTTG 2678363 Query 21099 ACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTT 21158 || | | ||| || ||| | |||| || | ||| |||||||||||||| | || Sbjct 2678364 ACGTTGTCGATGGTGTCAGAAGACTCCACCTCGAGGGTGATGGTCTTGCCGGTGAGGGTC 2678423 Query 21159 TTGACAAATATTTGCAT 21175 ||||| || || ||||| Sbjct 2678424 TTGACGAAGATCTGCAT 2678440 >seq1 Length=11790407 Score = 91.5 bits (100), Expect = 1e-13 Identities = 142/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || || | ||| || | |||| ||| |||||||| || ||||| ||||| | Sbjct 6428052 CCACCACGGAGACGGAGAACAAGGTGCAGAGTAGACTCCTTCTGGATGTTGTAGTCGGAG 6427993 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 |||||| || | ||||| ||||| ||||| || | || | || ||| |||||| ||| Sbjct 6427992 AGGGTTCGGCCATCCTCGAGCTGCTTGCCAGCGAAGATCAATCGCTGTTGGTCCGGGGGA 6427933 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||| |||||||| |||||| || || | | ||| || || || ||| Sbjct 6427932 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCCGAGGACTCGACC 6427873 Query 21129 TCCACGGTAATGGTCTTGCCGGT 21151 || | ||| ||||||||||| || Sbjct 6427872 TCGAGGGTGATGGTCTTGCCCGT 6427850 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 422258268522596