Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20poae_20[genbank_20GCA_5F001675295.1_202016-06-22] 181 sequences; 46,476,831 total letters Query= NC_001993.1 Length=236120 Score E Sequences producing significant alignments: (Bits) Value seq3 84.2 3e-11 >seq3 Length=8783590 Score = 84.2 bits (92), Expect = 3e-11 Identities = 165/234 (71%), Gaps = 25/234 (11%) Strand=Plus/Minus Query 17879 TTAAATAATATGTAGATAATTTTAAATCATTATTATAAGATATATTTAATATTTCTAAGT 17938 ||||||||||| |||| ||||||| | |||||||| | ||||||||||| || | Sbjct 1431305 TTAAATAATATT---ATAAATTTAAATTAATATTATAAATTTTATTTAATATTATAAATT 1431249 Query 17939 TAACTAAATCTTCTAAAAATTTAAAATCAGTAATACCACAAAATTCACAATTTAATTTTA 17998 ||| | ||| | || |||||| | ||||| | ||| | ||||||||| ||| Sbjct 1431248 TAAATTAATAT--TATAAATTT----TATTTAATATTATAAATT---CAATTTAATATTA 1431198 Query 17999 TTAATGATACTGGtaatttacattctgataaattatttttataattatatgatacattta 18058 | ||| ||| | |||||| ||| | ||| || ||||| || |||| ||| ||||| Sbjct 1431197 TAAATAATATTATAAATTTA-ATT-TAATATTATAAATTTAT-ATAATATTATAAATTTA 1431141 Query 18059 attt----ttctaaatt--aattaatggttctaaaaatttaaaattaGTAATAT 18106 |||| || |||||| ||||||| || |||| || |||||| || ||| Sbjct 1431140 ATTTAATATTATAAATTTAAATTAAT-ATTATAAA---TTTAAATTAATATTAT 1431091 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 755454290780800