Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20poae_20[genbank_20GCA_5F001675295.1_202016-06-22] 181 sequences; 46,476,831 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq3 86.0 1e-11 >seq3 Length=8783590 Score = 86.0 bits (94), Expect = 1e-11 Identities = 119/167 (71%), Gaps = 0/167 (0%) Strand=Plus/Minus Query 254001 CTTCCTCATTTGCTTTTCCACGGTCCTCCCGGAACAGGCAAGACGTCAACCATCCTGGCG 254060 || |||||| | || | |||| |||||||| || || |||||||||||||| || ||| Sbjct 4852428 CTCCCTCATCTACTCCTATACGGCCCTCCCGGTACCGGAAAGACGTCAACCATTCTTGCG 4852369 Query 254061 CTGGCCCGAACCCTGTTGGGCGAGGGGAACATGAGAGAGCGCGTGCTCGAGCTGAACGCT 254120 || ||||| | | ||| | || ||| | || || |||||||| ||||| Sbjct 4852368 CTTGCCCGCCGTATCTATGGCACTGCCAATATGCGCCAGATGGTTCTCGAGCTTAACGCC 4852309 Query 254121 TCTGACGAACGCGGGTTGGACGTCGTCCGCGACAAGATCAAGACTTT 254167 || ||||| || || | |||||||| || || |||||||||| || Sbjct 4852308 TCGGACGACCGTGGTATTGACGTCGTGCGAGAGCAGATCAAGACGTT 4852262 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073763909868608