Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20poae_20[genbank_20GCA_5F001675295.1_202016-06-22] 181 sequences; 46,476,831 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq3 156 8e-33 >seq3 Length=8783590 Score = 156 bits (172), Expect = 8e-33 Identities = 303/446 (68%), Gaps = 15/446 (3%) Strand=Plus/Minus Query 101916 TTGTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCT 101975 |||||||||||||||| ||||| || |||||||| || ||||| || || || ||||||| Sbjct 2692556 TTGTTGCCTTTGCTGCCGTTGAGGGTATCTTCTTCAGCGGTGCCTTTGCCTCTATTTTCT 2692497 Query 101976 GGATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGG 102035 || ||||||| | || | |||||||||| |||| |||||| ||| |||| ||| | | Sbjct 2692496 GGCTCAAGAAGCGTGGCCTCATGCCTGGTCTGACCTTCTCCAACGAGCTCATCTCTCGTG 2692437 Query 102036 ACGAAGGTCTTCATCGCGACTTTGCATGCATGCT----GTTGA--AAAAGGGTTTTGTTG 102089 |||| |||||||| |||||||| ||| | || | | ||||| || Sbjct 2692436 ACGAGGGTCTTCACACTGACTTTGCCTGCCTCCTCCACTCTCACCTTAAGGGACGTG--- 2692380 Query 102090 ATACCCCATCAAGAGAAAGGATTCTTGAAATTGTCACTGAAGCCGTCCGAATTGAACAAG 102149 ||| |||| | | ||| | || || |||| || ||||| ||||| || | Sbjct 2692379 -----CCAGCAAG-CAGATGATCCAGGACATCATCACCGATGCCGTTACCATTGAGCAGG 2692326 Query 102150 AATTTCTCACAGTTTCCCTGCCTGTTAAATTAGTGGGAATGAACTGCAAGTTGATGAGCC 102209 | || || || | | || ||| | | |||| ||||||| ||| | |||| | Sbjct 2692325 AGTTCCTTACTGAGGCTCTCCCTTGTGCTCTTCTGGGCATGAACTCCAACCTCATGAAGC 2692266 Query 102210 AGTACATTGAATTTGTGGCAGATAAACTATTGGTTGAAATGGGACTAGAAAAGCACTATA 102269 ||||||| || ||||| || ||| || | |||| | || || ||| || | Sbjct 2692265 AGTACATCGAGTTTGTCGCTGATCGTCTGCTCGTTGCTCTCGGTAACGAGAAGGTGTACA 2692206 Query 102270 ATGTTACCAACCCCTTCCCATTCATGGACAATATTTCCCTCGAGAATAAGACCAACTTTT 102329 | | ||| ||||||||| |||||||| || || || || | ||||||||||||| Sbjct 2692205 AGGCTACAAACCCCTTCGACTTCATGGAGAACATCTCTCTGGGTGGCAAGACCAACTTTT 2692146 Query 102330 TTGAAAAGAGAGTCGCCGAGTATCAA 102355 | || ||| | || ||||| || ||| Sbjct 2692145 TCGAGAAGCGCGTTGCCGACTACCAA 2692120 Score = 96.9 bits (106), Expect = 7e-15 Identities = 156/219 (71%), Gaps = 4/219 (2%) Strand=Plus/Plus Query 94824 CTTAAGAGTATCATAAATACCCTCAATGCTATCATCTTGAAGGCCCAGAAGGAAGCACGA 94883 ||| || ||||| || ||||| |||||||| || || | | | | ||||||||| || Sbjct 3511075 CTTGAGGGTATCGTAGATACCGTCAATGCTGTCCTCCTTCATATCAACAAGGAAGCATGA 3511134 Query 94884 GGAAAGTTGGGGTGTGACTGTT-CCACAATTAAACAGTGTGGGGGAAGCATGGGTAAAAT 94942 ||| || || || ||| | | ||| || || ||||||||||||||||| || || Sbjct 3511135 GGACAGCTGAGGC-TGAGGGGTACCAGCGTTGAATAGTGTGGGGGAAGCATGAGTGAAGA 3511193 Query 94943 AGTGCCTCGACATGAGATCATATGTTTCAATGACAGATTTGATGTC-TGATCCGTGAATG 95001 | | || |||||||| | ||||| || | |||| | || || | | || | || Sbjct 3511194 ACTTGCTGGACATGAGGTTGTATGTCTCCAAGACACGATCGACATCGTCACCCCAG-ATA 3511252 Query 95002 CCGACAGCCACACGCATAATCATGTCCTGAGGGCGCTCA 95040 || ||||| |||||||| ||||| | |||||| |||||| Sbjct 3511253 CCAACAGCAACACGCATGATCATATGCTGAGGACGCTCA 3511291 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989581705092855