Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20poae_20[genbank_20GCA_5F001675295.1_202016-06-22] 181 sequences; 46,476,831 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq3 150 3e-31 >seq3 Length=8783590 Score = 150 bits (166), Expect = 3e-31 Identities = 551/853 (65%), Gaps = 16/853 (2%) Strand=Plus/Plus Query 49669 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTT 49728 |||||||| || | || || || |||||||| || || || || ||| || || || Sbjct 2692118 TTTTGGTAGTCGGCAACGCGCTTCTCGAAAAAGTTGGTCTTGCCACCCAGAGAGATGTTC 2692177 Query 49729 TCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATC 49788 |||||||| || || || || ||| | || || | || | || | || | | Sbjct 2692178 TCCATGAAGTCGAAGGGGTTTGTAGCCTTGTACACCTTCTCGTTACCGAGAGCAACGAGC 2692237 Query 49789 AATCTATCCGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGT 49848 | | ||| |||||||| || || || ||||| | | | ||||| || | ||| Sbjct 2692238 AGACGATCAGCGACAAACTCGATGTACTGCTTCATGAGGTTGGAGTTCATGCCCAGAAGA 2692297 Query 49849 TTAACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACCGCATCTGTTATAATA 49908 | || |||||| ||||||| || || || ||||||| || ||||| || || || Sbjct 2692298 GCACAAGGGAGAGCCTCAGTAAGGAACTCCTGCTCAATGGTAACGGCATCGGTGATGAT- 2692356 Query 49909 GATCTAACGGTTTCTTCACTCGGTGG-ATG-CAATAAATGTTTAAAC--ATCAAACATGC 49964 | || || | | || | ||| | | | | || || | | | || || Sbjct 2692357 GTCCT---GGATCATCTGCTTGCTGGCACGTCCCTTAAGGTGAGAGTGGAGGAGGCAGGC 2692413 Query 49965 GAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGG 50024 || || ||| ||||||||||| | | || || |||||||| || || || || || Sbjct 2692414 AAAGTCAGTGTGAAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTCAGACCAGG 2692473 Query 50025 CATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAGATTCC 50084 ||| ||||||||||| || ||||| || || || ||||| | || |||||||| || Sbjct 2692474 CATGAGGCCACGCTTCTTGAGCCAGAAAATAGAGGCAAAGGCACCGCTGAAGAAGATACC 2692533 Query 50085 TTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGG---CGCTGTCATGTATCCA 50141 || || || |||||||||||||| | | || | || | |||| || ||||| Sbjct 2692534 CTCAACGGCAGCAAAGGCAACAAGACGTTGAGCAAATGAGGAGTCCTTGTCCTGGATCCA 2692593 Query 50142 -CTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGA 50200 | || ||||| || ||||||||| | ||||| || || || ||||| || |||| Sbjct 2692594 TCGAATG-GCCCAGTCAGCCTTCTTTCGGATGCAAGGAATAGTGTCAATGGCGTTGAAGA 2692652 Query 50201 GATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCG 50260 | || || ||| | || || | || || || || | || || | || | Sbjct 2692653 GGTATGTTCTTTGGGCAGGCTCCTTGATGTAGGTGTCAATGAGTAGGGAGTATGTCTCGG 2692712 Query 50261 AATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCA 50320 | || ||||| || || ||||| || |||||||| |||| |||||||| |||||| | Sbjct 2692713 AGTGGATGTTCTCCATCATGATCTGGAAACCGTAGAAGCATCGAGCCTCGGGAATCTGGA 2692772 Query 50321 CTTCTGTACAAAATCGTTCAGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAA 50380 | || || ||||| ||| | | || || || || || || ||| ||| || || | Sbjct 2692773 CCTCGCCACTGAATCGCTCAACAAGGTTCTCGTTGACGATACCATCAGAGGCAGCGAAGA 2692832 Query 50381 ACGCCAATACATGTTTTATAAAATGTTTTTCGTTGGGTGTTA---GTTTATTCCAATCAT 50437 | || | | || | || | || | | || | | || ||||| || | Sbjct 2692833 AAGCGAGGATGTGGGAGACGAAGAACTGCTCATCTGCAGTCAGACGGTTGTTCCAGTCGT 2692892 Query 50438 TGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTAT 50497 || ||| || || | ||| | || || ||||||| || || ||||||||||| || | Sbjct 2692893 GGAGATCCTTGGAAAGATCGATCTCCTCGGCTGTCCAGAAGGAAGCCTCTGCCTTCTTGT 2692952 Query 50498 ACATATTCCAGAT 50510 |||| | |||||| Sbjct 2692953 ACATCTGCCAGAT 2692965 Score = 138 bits (152), Expect = 2e-27 Identities = 578/894 (65%), Gaps = 20/894 (2%) Strand=Plus/Plus Query 79621 GATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCA-TATTGTATTATTTCAGTGCA 79679 || || || || ||||| || ||||||| || | ||| || | || || || ||||| Sbjct 3510440 GAGGCAAGGTTGCAAACAGCAACCTCATCAGGGGC-GCAGTACTCAATGATCTCGGTGCA 3510498 Query 79680 GAGGTTACTACACTTAATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATC 79739 ||||| | |||||| || | || | ||| || ||||| ||| || ||| Sbjct 3510499 AAGGTTGGAGCTTCGAATGGTACCAAGGTTCTTTTGGTTGCTCTTGCGGTTGCAGTGATC 3510558 Query 79740 CTTATAAAGAATGAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGAC 79799 ||| || || ||||| || | || || || |||| | || | || || | ||| | Sbjct 3510559 CTTGTAGAGCATGAAAGGGTTTCCGGTCTCTGTCTGGGCCTCAAGGATGGCGTACCAAA- 3510617 Query 79800 GACTC-GAGCCTTTATTATAGACTTGTATCTCTTT---TCTCTTTCGTA-TTGT-GTATA 79853 | || | ||||| || ||||||| | ||| ||||| ||||| || | ||| | Sbjct 3510618 GCTTCTGGGCCTTGAT---AGACTTGCGACCCTTACCCTCTCTCTCGTACTTCTCGTACA 3510674 Query 79854 TAATCGTTCGAACTCGTCTCCCCAAACATCGTCTAATCCAGGACATTCGTCAGGACACAT 79913 | | || |||||||| || | || | | ||||| || |||| || ||||| Sbjct 3510675 GAGCC--TCAAACTCGTCACCGTAGCAGTCAGCCAGGCCAGGGCACTCGTTGGGGCACAT 3510732 Query 79914 CAACGACCACTCTCCATCATCCTTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGC 79973 | | ||| || || | | || || || |||||||| |||||||| ||||||||||| Sbjct 3510733 GAGAGTCCATTCGCCGTTCTTCTCGACACGCTTCATAAAAAGATCAGGGATCCAAAGAGC 3510792 Query 79974 TATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAA 80033 | || || || | | | ||| || || || ||||||| ||||| ||||| Sbjct 3510793 CAGGAACAGGTCACGAGCGCGGACCTCTTCCTTACCGTGATTCTTTCGGAGATCAAGGAA 3510852 Query 80034 CGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGTCGTTTGTT 80093 | | | | ||| | ||||| || || | ||| || || | | || ||||| ||||| Sbjct 3510853 CTCGAAGACATCGGCGTGCCAAGGCTCAAGGTAGATAGCGAATGCACCAGGTCGCTTGTT 3510912 Query 80094 TCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACC 80153 || ||||| || | || | ||| |||||||| | || | | ||| |||| || ||| Sbjct 3510913 ACCACCCTGGTCGACATAACGAGCAGTGTTATTGAAGACACGTAGCATGGGAACAACACC 3510972 Query 80154 ATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGA 80213 || || ||||| ||||| |||| ||| || ||| ||||||| || | | | | Sbjct 3510973 GTTAGAAGTACCGTTGGTTCCGGCGATGTAAGAGCCAGTGGCACGGAT-TCGGTGAACGT 3511031 Query 80214 T-AGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGA 80272 | | || || || || ||||| ||||| || | || || || | ||||| |||| Sbjct 3511032 TCAAGCCAATACCACCAGCCATCTTAGAAATCATGGCACAAGTCTTGAGGGTATCGTAGA 3511091 Query 80273 TGCCCTCTATGCTATCATCAATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGAC 80332 | || || ||||| || || |||| | || || || || |||| || | || Sbjct 3511092 TACCGTCAATGCTGTCCTCCTTCATATCAACAAGGAAGCATGAGGACAGCTGAGGCTGAG 3511151 Query 80333 TAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGAT 80392 || || || || |||| || || ||||| || || || | || |||| || | Sbjct 3511152 GGGTACCAGCGTTGAATAGTGTGGGGGAAGCATGAGTGAAGAACTTGCTGGACATGAGGT 3511211 Query 80393 TGTACGTCT-CAATAGCTGATTCTATATC-CCATTGATGAATTCCTACCGCGACACGCAT 80450 |||| |||| ||| | || || | ||| || | || || || || |||||||| Sbjct 3511212 TGTATGTCTCCAAGACACGA-TCGACATCGTCACCCCAG-ATACCAACAGCAACACGCAT 3511269 Query 80451 TAACATGTGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAAGA 80504 | ||| |||||||| | ||| | || ||| | || ||||| || || || Sbjct 3511270 GATCATATGCTGAGGACGCTCAGCAATTTTGCCGTCAATATTCAATAAATAGGA 3511323 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718267174916840